Magallana angulata (Portugese oyster): 128166258
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Entry
128166258 CDS
T09348
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128166258
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128166258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
Arm
ResIII
PH_SMPa
Motif
Other DBs
NCBI-GeneID:
128166258
NCBI-ProteinID:
XP_052687264
LinkDB
All DBs
Position
10:12026194..12045838
Genome browser
AA seq
1823 aa
AA seq
DB search
MTTRLDRLFLLLDTGSTPLIRKSAAEQLGEVQKLHPYELQNLLSKVHDYLKSSSWETRIA
AGQAVSAIARNVPKWNKKIPIKQETNGNVVEENPIQLLFTQFNIDKVLSQGASLLGAEEK
QYETEPLSMKDKDQLSLQRQMLNKRLGLDMAGNLGIGGDIFSDEDLVAGIKTENGDTYSN
KRSVSDILKQQLLDVTGGMSAREHSRIKRRAKILAKQRSKDCYNEQMSLDTEPPCKKAKS
QVSVDVGSSESKLVMEASVDIEEDEEWYFESFCELLMNDLFNSSWETRHGAATGLREVIR
IHGDSAGLSIDIPLDQLHTINQVWLTDLALRLLCVLSLDRFGDYVSDEVVAPVRETSAQT
LGMVIKHLDRCGVEGMVNVLLQLLAQQQWEVRHGGLLGFKYLLAVRQDMTDRILPAVLPS
LFRGLQDVDDDVRAVAAAALVPVAHDLVRLLPQQVPLILTCLWDTLLDLDDLTASTNSIM
TLLSTILTNPQASIRDWLSRPLPELVPRLWPFLRHSIASVRHSALQTFHTLLTLPEDQQS
VQPWLPFILQDALRHIFQRSLLEEKPNITKILEKVWNQLLLKAPLEYLVGNSLPWLGVWL
CLCMQPSKLPFDSSYLIEAKHRGRVHSDSEQGKSRHSIGTAQKSMDYIAGTETLNASVVD
RDMAVMRTRIMATRFLGLLCSYIIREIPNFPPEAEKPVISLSKLFLFHLNSKSAVQRFVI
AQVVYNLALSNKETKLPDEAVAKLLECLNDAIYFDEVAISFTHMQSDCRDFMAGLKQNGV
DIDSVIPPGGIITLDQASSLTTTIFDQAKTTLKPKSQQVFEDRRRQLKVIVDTTIQELQT
LTIRVQCSLAKAAVELDALPEKLNPVIRPLMDCIKKEQNKEIQQEAADCLCRLLKKCLDK
NPNPNSKVLKNLCTFLCVDPTFTPRVASPIPSHTADESEVKCDSKFGIITLTKQQKTPDV
GKKWLKRAASVKNEESSSDQNQDNGETQEQHQIQRRGASLALTTIARVFGDDLPTSLPTL
WENVVEPLQGLGKENMLTEEKAQELVNSLQVLETLCTVMTPNLQLQLKERLPLLLDCLHS
HFTAVRHMAARCFGMLCQVMTLDLMTFIIEKIVPLMDIADNVIYRQGATEALACVIDGLG
LDLIPYIVLLVVQVLRRMSDQNEAVRLMATACFASLIRLMPLEAGITDPPEMSPALIAEK
EKQRKFLEQLMDGSKLEGYNIVVPVKAELRKYQQDGVNWLAFLNKYNLHGILCDDMGLGK
TLQSICIMASDHKLRDQKYQETQSMEFAPMPSIVICPPTLIGHWVYEVNKFVDEAHLNPL
MYAGPPGERARIQKKVKKHNLIVASYDVVRNDIDFFSTISWNYCILDEGHIIKNGKTKLS
KAVKQLVCNHRLILSGTPIQNNVLDLWSLFDFLMPGFLGTEKQFQARYGKPILQSRDAKS
TSKEQEAGALAMESLHRQVLPFILRRLKEDVLQDLPPKIIQDYYCELSPLQTQLYEDFAK
SRAKQGVEDSVTLLESTDNKERKSAGATHVFQALQYLRKLCNHPALVLTTSHPKYEEVTK
QLKTSNSSLRDCQHAPKLNALKQLLLDCGIGVAMPTGSGSGFAADQPVVNQHRVLLFCQL
KSMLNIVEEDLLKSQMPSVTYLRLDGSIPAGSRQQIVNRFNNDPSIDILLLTTHVGGLGL
NLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMGLQKFKMT
IANTIISQDNASLKTMGTDQLLDLFSLDDKAKGQEIVSSGGSSSDQNKRESIKSILENLG
DLWDEKEYESEYNLDNFIKSLKR
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgagacttgacaggctgtttttacttctggatactggatcaaccccactgatt
cgaaaatcagcagctgaacaacttggagaggttcagaaactgcatccttatgaacttcag
aacctgctttcaaaggttcatgactacttaaaaagttcaagctgggagaccaggatagct
gcaggacaggcagtgtccgccattgcaagaaatgtgcccaagtggaacaagaaaattccc
atcaagcaagaaaccaatggcaatgtggtggaagaaaatcccattcaactgttgtttact
cagttcaacattgacaaggtgttgtctcaaggggcatcactcttgggagccgaagagaaa
cagtatgaaacagaaccgctaagcatgaaagacaaagaccaattgtcgttacaacgtcag
atgctgaacaagaggcttggactagacatggccgggaatcttgggataggcggggacatt
ttctcagatgaagatttggtagctggaataaaaacagagaatggagacacatattctaac
aagagaagtgtgtctgacatcctgaaacaacaattgctggatgtgacgggtgggatgagt
gccagagaacacagccgaataaagcggcgagctaaaatcttggccaagcagaggtcaaaa
gactgctacaatgagcagatgtccctggatactgagcccccctgtaagaaggccaagtcc
caagtcagcgtggatgtcgggagcagtgagagcaagctggtcatggaggcctccgtggac
atcgaggaggatgaggagtggtattttgagtccttctgtgagttgctgatgaacgacctt
ttcaacagtagctgggagacacgacatggtgctgcaactgggctcagggaggtcatccgt
atccatggcgactcggctggcttatccatagatattccactggatcagttgcacaccatt
aaccaggtgtggttgacagaccttgccctcagactgctgtgtgtcctgtcccttgacagg
tttggggactatgtctctgatgaagtggttgctccagtgagggagaccagtgcccagaca
ctggggatggtgatcaaacacctggataggtgtggtgtggagggcatggtcaatgtctta
ctccagcttctggcccaacagcagtgggaggttaggcatgggggcctgctgggcttcaag
tacttactggctgtcagacaggacatgacagaccggatcctgcctgcagtattaccgtct
ctgttccgaggtctacaagatgtggatgatgatgtcagagctgttgccgcggcagcattg
gttcctgtggctcacgacctcgttagacttcttcctcaacaggtgcccttaatcctgact
tgtttgtgggacacactgctggatcttgatgacctcactgcctctactaacagtattatg
acacttttgtctaccatcctaacaaacccacaggcctcaatcagagactggttgtctcgc
ccccttcctgagctagttccaaggttgtggccatttcttcgacactccatagcctcagtc
agacattcagccttacaaaccttccatactttgctgactttaccagaagaccaacaatca
gttcagccctggctgccattcatcttacaagacgcacttaggcacatatttcaaaggagt
ctgctggaagaaaaacccaatataaccaagatacttgagaaagtgtggaaccagttgttg
ctgaaagcaccattagaatacctggtggggaattccctgccctggctcggggtctggctc
tgtctttgtatgcaaccttcaaagcttccatttgattcctcctaccttattgaggcaaag
cacagaggaagagtacattctgattctgaacaagggaagagcagacatagcattggtact
gcacagaagtccatggactacatagcaggaacagagaccctgaatgctagtgtggtggac
agggatatggctgtaatgagaacacgcataatggccaccaggtttcttgggttgctgtgt
agctacatcataagagaaattcccaactttccacctgaagcagagaaaccagtgatctcc
ctttccaagctcttcctgttccacttaaatagcaagtcggctgtccagagatttgtgata
gctcaagtggtctacaacctggcactgtccaacaaggagaccaaactccctgatgaagct
gttgccaagctgctggagtgtttgaatgatgccatctattttgatgaagtggctatctca
ttcacacacatgcagtctgactgtcgagatttcatggcaggactcaaacagaatggagta
gatatagactctgtgattccaccaggaggcatcataaccttagatcaggccagttctctc
accacaacaatatttgaccaagctaaaaccacgctcaaacctaaatctcagcaggtgttc
gaggacaggaggagacaactcaaggtcatagtggacacgaccattcaggagctccagacc
cttacaatcagggttcagtgtagtttagccaaggcagcagtagaactggatgcattgcca
gagaaactgaatcctgtcattcgcccattgatggactgcatcaaaaaggagcaaaataaa
gagattcagcaagaggcagctgactgcttatgtagattacttaagaaatgtctggacaaa
aaccctaaccctaattccaaggtcctgaagaacctgtgcacctttctgtgtgtggacccc
acctttacccccagggttgcttcacccatccccagccacacagctgatgaaagtgaagtc
aaatgtgattctaagtttggcatcataaccctaacaaagcagcaaaagactcctgatgtt
ggaaagaagtggctgaagcgggcagccagtgtaaaaaacgaagaatcatcttctgatcaa
aaccaggataatggcgagacacaagagcagcatcagatccagaggagaggggcgtcgctg
gcactgaccaccatcgcacgagtgtttggagatgacctccccaccagcctgcccactctg
tgggagaacgtggtggaacccctgcagggcctggggaaagaaaatatgctgacagaggag
aaagcccaggaactggtcaactctctgcaggtgctggagacactatgtacagtgatgact
ccaaacctacagttacagttgaaagaaaggttaccattactgctggattgtctgcacagt
cacttcactgcggtccgtcacatggcagccaggtgttttggaatgctctgtcaggtcatg
actcttgaccttatgacctttatcattgaaaaaatagttccactcatggatattgctgat
aatgtcatatacaggcagggagcaacagaagctttggcttgtgtgatagatggtcttgga
ctggatctgatcccgtacattgtgctgctggtggtgcaggtccttcgtcgtatgagtgac
cagaacgaggcggtcagattaatggccaccgcttgcttcgcctcactcatccgcttgatg
ccactagaggctggaataacagatcctccagaaatgagtcctgccctcattgcagagaaa
gagaagcaaaggaaattcctggagcaactgatggatggatccaaacttgagggctataac
attgtggtgcctgtcaaagcagaattaaggaagtaccagcaggatggtgtgaactggctg
gctttcctgaacaagtacaatctacacggcattctctgtgacgacatgggactgggtaaa
accctgcagtccatctgtataatggcctctgaccacaaactcagagatcaaaaataccag
gagactcagtccatggagtttgcccccatgccctccattgtgatctgtccccccactctg
attggacactgggtgtatgaggtcaacaagtttgttgacgaggctcaccttaatcccctc
atgtacgccggtccccccggagaacgagccagaattcagaagaaggtgaagaagcacaat
ttgattgtagcatcgtatgacgtggtgaggaatgacattgacttcttcagtaccatcagc
tggaactactgtattctggacgaagggcacatcattaagaatggcaagaccaaactctct
aaagcagtgaaacagttggtctgcaaccatcgtttaatcctgtcagggacccccatccag
aacaacgtcctagatctgtggtctctctttgactttctgatgccaggattcctgggaaca
gagaaacagttccaagccagatatggtaaacccattctacagagcagggatgctaaaagt
acttccaaggagcaggaagcaggtgctttggcgatggaatctcttcacagacaggttctt
ccgttcatcctccgtcgtctgaaggaagacgtcttgcaggatcttccacccaagatcatt
caagattactactgtgaacttagtcctctacagacacaattgtatgaggactttgccaaa
tcccgagcgaagcagggtgtggaggattctgtcacgttactggagagtacggataacaag
gagaggaagagtgctggtgctactcatgtcttccaggcattgcagtatttgaggaagctg
tgcaatcaccctgcccttgttttgactactagtcatcctaagtatgaggaagttacgaag
cagctcaagaccagtaactcctccttacgagactgtcaacacgcacccaaactgaacgcc
ttaaaacaactgctgttggactgtggaattggtgttgccatgccgacaggctctgggtca
gggtttgcagcggatcagcccgttgttaatcagcatcgtgtcctgttgttctgtcagctg
aaaagtatgctcaacattgtagaagaggacctgctgaagtcacaaatgccttccgtgacc
tacttacgactagatggcagtattccagcaggatccagacaacagattgtaaacaggttc
aacaacgacccctccattgacattctgttgttgaccacacatgtgggagggctaggtttg
aacttgaccggggccgacacggttatatttgtggaacatgactggaatccaatgaaggat
ctacaggcaatggatcgggctcatagaattggacaaaagaaagtggtcaatgtttacagg
ttgattacaagagggacactggaggaaaaaatcatggggcttcaaaagtttaagatgaca
attgccaacactatcatcagccaagacaatgctagtctcaaaacaatgggaacagaccaa
ctgctagatttgttttcattggacgataaggctaaaggtcaagagatagtgtcctctggt
ggcagcagtagtgatcaaaacaaacgggagagcatcaagtccattctggaaaatctagga
gatttatgggacgagaaggaatatgagtctgagtataacttggataatttcataaagtcg
ctgaaacgataa
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integrated database retrieval system
