Magallana angulata (Portugese oyster): 128166369
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Entry
128166369 CDS
T09348
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
canu03037
]
128166369
Cilium and associated proteins [BR:
canu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
128166369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
TPR_2
TPR_IFT80_172
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
TPR_12
PPR_2
EIF3I
TPR_COPA_B
TPR_1
TPR_GEMI5
MIT
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
128166369
NCBI-ProteinID:
XP_052687440
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All DBs
Position
10:complement(41250367..41268154)
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AA seq
1482 aa
AA seq
DB search
MAVYFDHRLDTDRSGINIDTQWYDGSPILAVNTYSDDTGGSVNLFLDEGEKLLNIPLTRT
CQATAMAWHPTKKILAVGWDNGELLVWNEHDHELHESLPLHKTSITVLGWSSAGTRLSSG
DKAGVLMVWKADAKGRLQQNPLHQHHIQEPLKIMLYRPVPPPDPNNDIAQLARAAVSGDE
SALDMFNWKKGKNNARGGAPFGAQEALTFFVGGATGGVYYVNDAGQCAQIFNVDGPVLTL
LHYDEKNILITVTESMLLTQHFITPEGEAREVLKVKMSGRGDSKTIVWAGLGILATSLGE
GVVRMWDLEHEDNYILSLEGHNSYDHNESITCISYCPEKGTLAGGTNMGNVALWKYSPPL
TGKVVDGEMKWKLQAPATVEGPIKQIRWGSNKHLLAVNTIANVFMLNEQVMSAGFKEQTA
VVQYGPSSLSVEVFSNMAHHDLKTDIQVKGIFTTKDALAVWNGRRVITYEYSADKSSIKA
AGTFTTETMNVCLHEQNVYCIEAMKVQVRTHQGTVKQTINFSEPEGQPVSIDVCGNYLVI
GTNIGLVRVYDLSRREAKPHSQPRNLGEIIPGFGSIISCKCNCSGTRVSVLVKSTNDAVD
PKLYFWDTDIDQVSYFNFETGRGEQDDFPPEQVEGVEGDTNDAERGKTQAAKDIAGRSPM
THYWDAHDPKLIVCEAKILMDIFHKKEKEEKKIVSLSKTMDDGPVEVMIVSLFSTPENGI
LIQDSFPLPEQYQTLLGIEVPYHYFVNKSENTSDDDGQGDGPRPEAVSPRMVARRTMRDF
VGLEDSDKNTKDAMLNFSYYLTIGNMDEAFKAIKLIKSESVWENMAKMCVKSRRLDVASV
CLGNMGHARGARALREAMKEPELDAKVAVLAMQLGLKEDAERLLKNCKRYDLLNEFYQSI
GDWKKALETAEMYDRIHLRTTYFNFAKHLEMKGEYSEAIPNYEKSDTHRFEVPRMLFDEP
EALEHYISMHKDKALHKWWAQYMESTGDMENALQYYENAQDYLSLVRVYCYCGQMDKAAE
ICNNTGDRAACYHLGRQYENQDQIKEAIHFFTRAQAYFNAIRLCKEHGMEDQLMNLALMG
RPEDMIEAARYYEQKPGAQDKAVMLYHKARNFSKALDLSFRARQFGALQLISGELDERAD
PELLKRCGDFFMENGQYDKAVDLLAIGKKYWEALKICMDQTVEINEDLAEKLTPSKDDAG
IDTMERVKILEAIAEVCMHQGEYHLATKKFTQAGNKIKAMKALLKSGDTEKICFFANVSR
QKEIYIMAANYLQSLDWRKDPEIMKNIIGFYTKGRALDSLAGFYDACAQVEIDEYQDYEK
ALRALGEAYKCLTKAKMNDEMLLEERLAQLKNKMALIKKFVTARRAFEENPEEGIKQCQI
LLEEPDLESGVRVGDVYGVMIEYYARRDRWKAAHAAIEEMKSRIPNMNIGYYVNMRTVEA
VYRALDIPMGDMNRGKMNGVMDEEDGEIVEEEVDNIYGHDEV
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtactttgatcatcgattggatactgaccgcagtggaataaacattgacaca
cagtggtatgatggcagtccaattctcgcagtgaatacatacagtgatgacactggggga
tccgtaaatctctttcttgatgagggagagaagctgctaaatattccactgacccgcaca
tgtcaggccaccgccatggcgtggcaccctacaaagaagatccttgcggtaggctgggac
aatggggaactgttggtgtggaacgaacatgaccacgagctgcacgagtcactccctcta
cacaagaccagcattactgtccttggatggagttcagcggggaccagactttcatctgga
gacaaggctggggttttaatggtatggaaagctgatgccaaaggccggctccaacagaat
cctttacatcagcaccacatacaggagccactcaagatcatgttgtatagaccggtccct
cctccagatcctaataatgacatagcacaacttgcccgggctgctgttagtggggatgag
agtgctttagatatgtttaactggaagaaaggaaagaacaatgcaagaggaggggcacct
tttggggcccaggaggctctgaccttctttgttggtggagcgacaggtggtgtgtactat
gtaaatgatgcaggccagtgtgcccagatcttcaatgtagatggacctgttttgaccttg
ctgcactatgatgaaaagaacattctgatcacggtcacagaaagcatgttgctgactcag
catttcattactcctgagggagaagccagggaggttctgaaggttaaaatgagtggaaga
ggagattcaaaaaccatcgtttgggcagggctgggaatcttggccacatctcttggagaa
ggtgttgtgaggatgtgggacttggaacatgaagataattacatactgagcctagaaggc
cacaacagttacgatcataatgagagcatcacttgtatctcatactgtcccgaaaaagga
actttggctggaggaaccaacatgggaaatgttgctttatggaagtattctccacctctt
actgggaaagttgtggatggagagatgaagtggaaactacaggccccagccacagtggag
ggtcccatcaaacagataaggtggggatccaacaagcacctgctggcagtaaatacaatt
gccaatgtgttcatgcttaatgagcaagtgatgagtgcaggcttcaaggagcagactgca
gttgttcagtatggacctagctccttatctgtggaggtgttctccaacatggcccatcac
gatctaaagactgatattcaagtgaagggcatattcacaaccaaagatgctttagcagtg
tggaatggtcggagagtgattacatatgaatattctgctgacaagtctagcatcaaagcg
gctggaacatttaccacagaaaccatgaatgtttgtctccatgaacagaatgtctactgc
atagaggcaatgaaagtgcaagttagaacccatcagggtacagtcaaacagactataaac
ttttcggagcccgagggacagccggtcagtatagatgtatgtggaaactacctggtcatt
ggaaccaatataggattggtcagagtgtacgacctttcaagaagagaggccaagccccac
agtcagcctagaaatctaggggaaataattcctggatttggatccattatttcctgcaaa
tgtaactgtagtggaactagagtcagtgtcttggtcaagtcgacaaatgatgctgttgac
cccaagctatatttctgggacacagatatagaccaggtatcgtactttaactttgagact
gggcggggagagcaggatgacttccccccggagcaagtggagggggtggagggggacacc
aatgacgcagagagaggaaaaactcaggctgccaaagacattgctggacggtctccaatg
acccactattgggatgctcatgaccccaaactcattgtctgtgaagctaaaattctaatg
gatatatttcataagaaggagaaagaggagaagaagattgtatccttgtccaagaccatg
gatgatggaccagtggaggtgatgatcgtatctttgttcagcaccccagagaatgggatt
ctgattcaggacagctttcccctccccgagcagtaccagacactgctaggcatagaggtc
ccctatcactactttgtcaacaagtccgagaacacgagtgatgacgacggacagggagat
ggtccccgcccagaggccgtgtcccccaggatggtggccaggaggacaatgagggatttt
gtggggctggaagacagcgacaaaaacaccaaggacgccatgcttaactttagctactac
ctgaccattggcaacatggacgaagctttcaaggcgatcaagctcatcaaaagtgagtct
gtatgggagaacatggccaagatgtgtgtcaagagtcgccgtctggacgtggccagtgtg
tgtctgggcaacatgggccatgcccggggtgcccgggcactgagggaagccatgaaagag
ccagaacttgacgccaaagtggcagttctagccatgcagcttggactcaaggaggatgcg
gagagattactgaagaactgtaagcgttatgatttgttgaacgaattctaccagtctatt
ggagattggaagaaagccctggaaacggccgagatgtacgaccgcattcatttgaggacc
acttactttaacttcgccaagcacctagaaatgaagggtgaatactctgaggctattcca
aactatgaaaaatcagacactcaccgatttgaggtccctagaatgctgtttgatgagcca
gaggctctagaacactacatcagcatgcataaagacaaagcattacacaaatggtgggct
cagtacatggagagtacaggcgatatggagaacgctctccagtactacgaaaatgcccag
gattatctctccttagtccgcgtctactgctactgtggtcagatggacaaggcagccgag
atatgtaacaacactggtgatcgtgcagcctgttatcacttggggcgacagtatgagaac
caggaccagattaaggaggcgattcacttctttacccgggcccaggcttactttaatgcc
atcagactctgtaaagagcatggtatggaggatcagctgatgaacctggctctaatggga
cgtcccgaggacatgatagaggcagcgcgctattacgaacagaagcccggggcccaggac
aaagctgtcatgttgtaccacaaggcaagaaatttctccaaagctttggatctctcattc
cgagcccgccagtttggagctctgcagcttatatctggtgagcttgacgagagagcggac
ccagaactactgaagcggtgcggtgatttcttcatggagaacggacagtacgacaaggcg
gtagatctacttgccatcggtaaaaagtattgggaggctttaaagatctgcatggaccag
acagtagagattaacgaagacttggcagagaaactgactccaagcaaggatgatgcagga
atcgacacgatggagcgggtcaaaatcttggaggccatcgcggaggtctgcatgcatcag
ggagagtaccacttggctacaaagaagtttacacaggccggaaataaaatcaaggcaatg
aaagctctattgaagtctggagacacagagaagatctgtttctttgctaacgtctccaga
cagaaggagatttacatcatggctgccaactaccttcagtcgttagactggcgaaaagac
cccgaaattatgaagaacatcatagggttctacaccaaagggagagcactggactccctg
gctggattctatgatgcttgtgcacaggtggagatagacgaatatcaagactatgagaaa
gctttacgtgcattaggagaggcctacaagtgtctcactaaggccaagatgaatgacgaa
atgttactggaagaaagattagctcagctgaaaaataagatggcactgataaagaaattt
gtcactgctagaagggcgtttgaagagaatcctgaggagggaatcaagcagtgtcagatt
ctgttagaggagcctgatctagagtcaggggtgcgtgtaggggatgtgtatggggtcatg
atcgagtattacgcccgcagggacagatggaaagctgctcatgcagcaatagaagaaatg
aagagtaggatccccaatatgaacataggttattatgttaatatgagaactgtagaagca
gtgtatcgtgctttggacattcccatgggggatatgaatagaggaaagatgaatggagtg
atggatgaggaagatggagagattgtagaagaggaagtggataatatttatggacatgat
gaagtctga
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integrated database retrieval system
