Magallana angulata (Portugese oyster): 128166399
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Entry
128166399 CDS
T09348
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
128166399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128166399
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128166399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
128166399
NCBI-ProteinID:
XP_052687491
LinkDB
All DBs
Position
10:complement(18824633..18838617)
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AA seq
781 aa
AA seq
DB search
MALSMIESLFSQASYTSQEEIDRICQGVLENLYAPDKTNECMNQLRQLYFILQASHTEPC
LPRNMISTLVNMVSSMDHDKTKECLLCEQILAELLPREQEDLGSDFYPSSNYQNATSSAN
CFPLYLMQGNKKFCLADVIPHAVRWMSSGKADFNVQRQAFCFLVSLQVLHNRLVNEETMK
TVNSTASDWLMNASLYQLPNPYTINPFKKDQAPVVNEVDGTPSRNFFTVLNIGQYYTNDQ
FLNIYSFSMLYKWLYHSQTSTEEASDVASKSAHVFKSLVDKSIDYCFRILDQCERKPKVP
SDIDLQNCCLLEVVNVLDMICKIEPGHVARVFQEVRRLYQRLMHELDKPRLLIPVLQFFL
NHGKSVEHDPQEAYTLFFHKLLTQCYLDPAFSFDTITFIKDNLETLCHNTNVLSTYFPNI
LKMLAWNPRSYLADFEEILPALMSPNTAIEVFHMLLDLPCVTVALEITERCKKSEVQTLS
TEAEPTSSLSAFQSALYRPMFNFFTRVEGGHGDTINRLSLFHNILGDMNQHPRVLVCSQV
VPVLLRIWFDVVLDDASSDFLSHLIPVLLERTAFLYNIPGYQGDVRKVLAENVVHLLKKY
PEILYDQASEIKDFLISPRNISGREEFFANLVWCVGELCSVRHDNRCTAETITRFFDTLE
VLTYELSGMSSANLKEEISNPSKIICMLMSSISKLASKCQDLIPRSILLLTKVAKQQQTS
FLDTEIKDAVVGRAQELINLLKLPNFANVVLNPDDEIETGRWHRDNTSLPITLRCVQHIL
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttccatgatagaaagtcttttttctcaggcgagttatacttctcaagaggaa
attgatcgaatctgtcaaggtgttttagagaatctgtatgcacctgataaaaccaatgag
tgtatgaatcagttgagacagctttatttcattcttcaagcctcacacacagagccgtgt
ttaccaagaaatatgatttcaactctggttaacatggtgagttcaatggaccatgacaaa
acaaaagagtgtcttctatgtgagcagatccttgcagaacttttgcctcgtgaacaggag
gacctgggctcggatttttatccaagctcaaattatcaaaatgcaacgtcctcagccaac
tgttttcctctctatctaatgcaaggaaataagaaattttgtttggctgatgtcattcca
catgctgtaagatggatgtcatcaggaaaagcagactttaatgtacagaggcaggccttc
tgttttcttgtatctctccaggttttacacaacagactggtaaacgaagagactatgaag
accgtgaacagtacagccagtgactggctgatgaatgcttccctgtatcagctccccaat
ccatacaccatcaacccattcaagaaggaccaggccccagtagtgaatgaggtcgatggg
actccaagcagaaatttcttcactgtgctcaacattggacaatactacacaaacgaccag
ttcctgaacatatatagtttttctatgttgtacaaatggctgtatcactcacaaacatca
acggaagaagcttcagacgtggccagtaagagtgctcatgtatttaaaagtctggtagac
aaatccattgactactgcttcaggattttggaccagtgtgaaagaaaaccgaaagttcca
tcagacatagacctccaaaactgttgtttgttggaagtggtgaatgtactggacatgatt
tgtaagattgagccagggcacgttgcccgagtgttccaggaagtccgacgtctttatcag
agactgatgcatgaactggacaaacccaggcttcttattccagtacttcagtttttcctt
aatcatggtaagagtgtggaacatgatccacaggaggcctacactctgttttttcacaaa
ctgctgacccagtgctacctggaccccgccttcagttttgacactattactttcataaaa
gacaacctggaaactctctgtcataacaccaacgtattatccacttattttccaaacatc
ctaaagatgctggcatggaatccaaggtcctacctggctgattttgaggaaattttacca
gctcttatgtctccaaacacagctattgaagttttccatatgctcctggatttaccctgt
gtgactgttgccctggagataactgagcgatgtaagaagagtgaggttcagaccttatcc
actgaagcagaaccaaccagttcactgtcagcattccagagcgccctctacaggccgatg
ttcaacttttttacacgtgttgaaggaggacatggagatacaataaataggttgtctctc
tttcataatattctaggagacatgaaccaacatccccgagttcttgtttgctctcaggtg
gttcctgtgttacttaggatttggtttgatgtagtgttggatgatgcttcctcagatttc
ctgagtcacttaattccagttcttcttgagaggacagccttcttgtacaacattcctgga
tatcaaggggatgtccgaaaagtattggcggaaaacgtagttcaccttttaaagaagtat
ccagaaatactgtatgatcaagcatcagaaattaaagattttctcattagtcctaggaat
atatctgggagagaggaattctttgcaaatttggtttggtgtgtgggtgaactttgttca
gtcaggcatgacaacaggtgtacagctgaaacaataacaagattctttgatacgcttgaa
gtgctgacttatgaactctcagggatgtcatctgccaatttaaaagaagagatttcaaat
ccctctaaaattatttgcatgctgatgtcctccatctcaaagttggcttctaaatgtcaa
gatttgattccacggtcaatactcctcctgaccaaagttgccaagcaacagcagactagt
ttcttagatacagagattaaggatgctgtggttggcagagcacaagaactgatcaacctt
ctaaaactgccaaattttgccaatgttgtgttgaaccctgatgatgagatagagactgga
agatggcacagagataacaccagtttacctatcaccctcagatgtgtccagcacatctta
tcatag
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