Magallana angulata (Portugese oyster): 128166418
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Entry
128166418 CDS
T09348
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128166418
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128166418
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128166418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
RING_XB3-XBAT31
DUF4637
zf-RING_2
Cas8b_C
Zn-ribbon_GIR1
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
128166418
NCBI-ProteinID:
XP_052687530
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All DBs
Position
10:18153715..18156034
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AA seq
668 aa
AA seq
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MSTAYHRCQQLIQQCLCCYFPTMSGKIEEEQNDALNCIVCKKLLQRPKVLPCLHSLCSRC
LLSVLDSNKSKDKFHCPKCEETTIIPIGGVEGFQDNVYLNGILGVHNSHNSKGKVCDICS
LRKKKNTATSKCLNCGDLLCQDCSTSHSATRQTINHKVVDLESVVKGTHDKAIRQLNRIP
CASHPEETLDIFCYDCNFLVCHECQLSYHFSHHTVAVDDADIDQRQEIATSLQFLDSKLK
HLNDIEEGINNTEATINEKEEHILADLENATEQLITQIQTEKRDVTQKVKEHMEKQRQIC
RDHVIQVRSRKETIQESCEFSNEVAQSGKNDEVIYLEPIILHRLRNLENLPRLRDEMTCQ
FPEVRLRNIFGNVETIRFFDFLPGSSNSVALLPQENSDVSGAPQVSQLLMVKKVNTFTNE
DETCPKISSLASTEGFFLVGDNANRKIKKFSSTGKFLETLSRSKSYSISICDDTVICSDS
FSVAFFSAGYSRKIAMDGTSSTYPTCVYENKNFAVADSSAHEVYIFDKAGDVISSIQLPR
ASRRTRRRNLSFICCNSKGEIIASDWGTNSVFLVGKNGKTLYEYHSKSESTRDWIPGGVC
VDIHDNVFIADQQKGAITILSPKFKVILKHSTKKDYLERPMNIAFDSSGQILVAGKNGIV
NIYSCKYL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcataccatagatgtcagcagttaatacaacagtgcttgtgttgctatttt
ccaactatgtctggaaagattgaagaagaacagaatgatgcgttgaactgtatagtctgc
aaaaagcttttgcaacgaccaaaagtccttccatgtttgcattcgctgtgttcgagatgt
cttctgtccgttctcgatagcaacaaaagcaaagataaattccactgtccaaaatgcgag
gaaaccacgatcataccaataggaggagtggagggcttccaagacaatgtttatctgaac
gggatacttggcgtacataattcgcacaacagcaaggggaaagtctgtgatatatgcagc
ctgcggaagaagaaaaacaccgctacatccaagtgcttgaactgcggcgatcttctctgc
caggactgcagtacttctcactcagccacccgccaaaccatcaaccacaaagttgtagat
ctggagagtgttgtaaagggcacacacgacaaggccatcagacaactgaacaggatacct
tgcgcttcccacccagaagagacgctggacatattttgctacgactgcaacttcttagta
tgtcatgagtgccagctttcctaccacttcagtcatcacacggtggctgtggatgacgcc
gacattgatcaacgtcaggaaatagcaacctctctacagttcctagacagtaagctgaaa
catctgaacgacatagaagaaggtataaacaacacggaagcgaccatcaacgaaaaagaa
gagcacattcttgcagacctggagaacgcaacagagcagcttattacgcaaattcaaaca
gaaaagcgtgatgtcactcaaaaggtaaaggagcatatggaaaagcaacgacagatttgc
agggatcatgtcattcaagtgagatcgagaaaggagacgatccaagaaagttgcgagttt
tccaacgaagtagctcagtctggaaaaaatgatgaggttatatatttagagccaataatt
cttcataggcttcgcaacttagaaaatcttccacgattgcgcgacgaaatgacctgccag
tttccagaggtgcgccttcgaaatatctttggaaacgtggaaacaattcgatttttcgat
ttcctgccaggttcgtcgaattcagtagctttactgccgcaggagaattcggatgtcagc
ggagcgcctcaagtgtcccagttattgatggtgaaaaaagtaaacacattcaccaacgaa
gacgaaacttgtccgaagatcagcagtcttgctagcaccgagggattctttttagtcgga
gacaatgccaacagaaaaatcaagaagtttagttcaactggaaaatttctggaaacgtta
tcgagatcgaaatcatatagcatttccatctgtgatgacacagttatttgcagcgacagt
ttttccgttgctttcttttcggcagggtacagtcgtaaaattgccatggatggcaccagc
agtacataccctacgtgcgtttacgaaaacaagaatttcgcagtcgccgacagcagtgcg
cacgaagtgtatatcttcgacaaagctggtgacgtcatcagtagcatccagctaccgaga
gcaagcaggaggaccagacgacgaaacttgtctttcatttgttgcaacagtaagggcgaa
atcattgcatcggattgggggacgaattctgttttccttgtcgggaagaacgggaaaact
ctttacgaatatcacagtaaaagcgagtccacgagggactggataccaggtggcgtgtgt
gtcgatatccatgacaacgtcttcattgccgaccaacagaaaggtgcgatcaccattctt
agccccaaatttaaagtaattttgaaacattcgacgaagaaggactacctcgagagaccc
atgaacattgcctttgacagttctggtcagattctagttgcaggcaaaaatggcatcgtc
aacatttattcttgcaaatatttgtag
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