Magallana angulata (Portugese oyster): 128166600
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Entry
128166600 CDS
T09348
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128166600
Membrane trafficking [BR:
canu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
128166600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
128166600
NCBI-ProteinID:
XP_052687835
LinkDB
All DBs
Position
10:16361393..16380314
Genome browser
AA seq
1406 aa
AA seq
DB search
MYFPLGWPKFLKNLQKGSKPLQYVISSCDRMLFAIITEDTLSIWYSKPSVQIVSYIHPYK
ETVSEGTFKLVEWKPDSSMIAVLTSKLTLLFFKVELDVSVPNHHCLYVQHEGKNQTPKRD
INGIPDSDSIPAIRVTLVAKMQLPANITCCLCVREEIMVATEEGSLHRIKWNASVNQKAS
FHIRGFPASLDFHQTKACKLTEEDGCVQQMEYSPIIGGYTLVLSSGKALFVIPPSIKVEN
SVPQGVWVTGLTDATCVAVNHRYRLMAFGCKSGIGAVYVINEVEGTIELSYKLHVSSKDY
PDACQKAGPVKCMKWTPDGTAVAVCWKNGGFSLWSVFGALLLCSLGGDLYPSDSPKLFPP
PVLSMEWGLEGYQLWIVCQEEQGVNGFAETEQDNHSITNVMQLQFVKSALTVNPCVTNHE
HVFLQGEDRLYMSISDGCASQNGGCQDSSQSLMSIGNKIWQIIPISHTYLGANWPIRYAA
VDKTGQCVAVAGKTGLAHYTFSTRKWKLFGNETQEKDLVVSGGMTWWKDFICVACYNIIG
QRDEIRCYPKNTKLDNTFAVITKVPSQILLLNTFRDILIIFCIDSHIMLYNMERKNSQKN
PLMELIKIQEVSLGNYIPHPVCVSGLALTSLRTEKFGSRSAQPSRDSECLLLNVAGKLLM
FQRDEPGAQVQAKQNKAKPQSFGAPAVVATNVENMWSTSRTNQSKSQLMEALWLGCGAQG
MKVWLPLYPKHEGKTHNFMSKRIMLPFRVDIYPLAVLFEDAVILGAASDGVTYKPPSEDT
KKSVQNLPFCIVERTSQIYLHHILRQLLRRNLGVNALDLARCCTELSYFPHVLELLLHEV
LEAEATSKEPIPDPLLPRVVAFIQEFPEFLQTIVHCARKTEVALWPHLFSVVGNPKELFE
QCIVSEELETAASYLIILQNLERPIISRQHATLLLDQSLERGKWDLARDLVRFLKAIDPS
EASTPPILTSSRTPSSKSYHSGVPSPPIMPSEADGFSFSTVSNVSNVSNVNRLRSSSMTG
ADYSENVPKGSKPKLKHTFSDNIFSVKKPPPKPKEEGAPDQMYIDMILCRHCRKLLETNH
LRDMGYFSANTEDFHLVSFLKRERLKGAKVEDFVRAVKDIHHQFEWPLPILSYHVFQQLK
NKTFSTSSLASLSLLDAENLPTVNVGAHNNDTEYHRYLGTLQSPSPLNLSQNLSNDVELK
PQVIKTEESSLATTLDISDTSSLLGELDYMTESSSQDTLSPELEILSQEMANKGPRQSEM
ELRYLLQILLEAGCLEWALIISLVLRDVEAVVRTVNTASMTDTPLEMVARMREGISYLEL
WADTECLGYKPFLHFIRKQIQVLGKLAEQTPPTLQLSTSVMNDESSDSEQLSPVLQTIHT
KNPDSSPELSPTQPRDPAKASECAIS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtatttccctctaggatggccaaaatttttgaaaaatctacagaagggttcaaagcca
ttacagtatgttataagtagttgtgaccgaatgctgtttgctatcattacagaggatacc
cttagtatttggtacagcaagccctcagtacagatagtcagctacatacatccttacaaa
gaaactgtctcagaggggaccttcaaattggtggaatggaagccagattcctctatgata
gctgttctgacctcaaagttaacactcctgttcttcaaagtggagctggatgtatctgtg
ccaaaccaccattgtttgtatgttcaacatgagggcaaaaatcagacccccaagcgggac
atcaatgggatcccagacagtgacagcatcccagccatcagggtcacactggtggccaaa
atgcagctccctgccaacatcacttgctgtttgtgtgttcgagaggaaattatggtggct
acagaagaaggctctttacatcgcatcaagtggaatgcctctgtaaatcaaaaggcttca
tttcatatacgtgggtttcctgcttcgttggacttccatcaaactaaagcttgtaagttg
acagaagaagatggctgtgtccagcagatggaatacagtccaatcattggcggttacacc
ctggtgctttctagtggaaaggctttgtttgttattccaccctccataaaggtggaaaac
agtgtgccccagggagtctgggtgacagggctgacggacgccacctgtgtagctgtcaat
cacaggtaccgcttgatggcctttggatgcaagagtgggattggtgctgtatatgtgatc
aatgaagtggagggcacaatagaactgtcttacaagttacacgtctccagtaaagattac
ccagatgcctgtcagaaagcaggtcctgtaaaatgcatgaagtggacaccagatggcact
gctgtagcggtctgctggaagaatggtggcttctccttgtggagtgtgtttggtgccctg
ctgctttgttcacttggtggagatctgtatccaagtgacagtccaaagttgtttccacca
cctgtcttatctatggaatggggtctggagggctaccagttatggattgtttgtcaggag
gaacagggtgtcaatggctttgcggagacagaacaggataatcacagcattaccaatgtg
atgcagctgcagtttgtcaaaagtgctctcactgttaatccatgtgtaacaaatcacgaa
catgttttcctgcaaggagaggacagactatacatgagcataagtgatggttgtgcctcc
cagaatggtggttgtcaagacagcagccaatcactgatgtcaataggaaacaaaatctgg
caaatcatccccatttctcacacttacctgggtgctaactggccaatcaggtatgcagcg
gtggacaagacgggtcagtgtgtggccgtggctggtaagacggggctggctcattacaca
ttctccacccgaaagtggaaactgtttggcaacgaaacacaggaaaaggatttggttgtg
tctggagggatgacatggtggaaggattttatctgtgtggcttgttacaacattattggg
caaagggacgagatccgctgttatccaaagaacactaagttagacaacacatttgctgtg
atcaccaaggttccctctcagattctgctgctcaacacgttcagagatattctcatcatc
ttctgcatagattctcatattatgttgtacaacatggagcgaaagaattctcaaaaaaat
cctctgatggagttaattaagatccaggaggtgtccctggggaactatatcccccaccct
gtgtgtgtatcggggctggctctcacctccctcaggacagagaaatttggaagtcgatca
gcccagcccagcagagactctgagtgcttgttgcttaatgttgctggaaagttgctgatg
tttcagagagatgaaccaggggcacaggtccaggcaaaacaaaataaagccaaacctcaa
tcctttggagctccagctgtggttgcaactaatgtagagaatatgtggtccacttctcgg
acaaatcagagtaaatcccagctgatggaggcactgtggctaggctgtggggcccagggg
atgaaggtgtggttacctttatatcctaaacatgaaggcaaaactcacaacttcatgtcg
aagcgcatcatgctgccattcagggtagacatatatcctctagctgttttatttgaggat
gctgtgatattaggggcagccagtgatggtgtgacttacaagcctcccagtgaagataca
aagaaatcagtccaaaatcttcccttctgtatcgtggagagaactagtcaaatctacctt
caccacatactaagacaacttcttcggcgaaatttgggagtgaatgccttggatttagcc
agatgttgtacagaattgtcctatttcccacatgtcctggagttgttgttgcatgaagtt
ttagaagctgaggccacatcaaaagagcctattcctgaccctttgctgcccagagtcgtt
gccttcattcaggagtttccagaatttctacaaacaattgttcactgtgctaggaaaaca
gaggttgctctgtggccccatctgttctctgtggttggtaaccccaaagaattgtttgag
caatgtatcgtgagtgaggagttggagactgctgcctcgtatctcatcatcctacagaat
ttagagcggccaatcattagtcgacagcatgctactttgttactggatcaatcacttgag
aggggaaagtgggatcttgctcgagatctagtccgctttttgaaggcaatcgatccttca
gaggccagtacccctccgattttgacctcctcgaggactccctcctccaagtcctaccac
tccggggtccctagtcctcccatcatgccctcggaggcagacgggttcagtttctccact
gtcagtaacgttagtaatgttagcaatgtcaacaggctgcgaagctccagcatgacaggg
gcagattactcagaaaatgtgccaaaggggagcaaacccaaactcaagcataccttctcc
gataatatattcagtgtcaaaaaaccaccacccaagccaaaggaagaaggggctccagat
cagatgtacatagatatgattctctgtcggcattgtcgtaaacttctggagacaaatcat
ttacgggacatggggtattttagtgccaacacagaggactttcatctagtctcatttctg
aaaagagagaggttaaagggtgcaaaagttgaggattttgtcagagcagtgaaagatatt
caccaccagtttgagtggcctcttcccattttatcatatcatgttttccagcagctcaag
aataaaactttctccacttcgagtctggcttccttatctttgttggatgcagagaacctc
cccacggtcaatgtaggggcacacaacaatgacacagagtaccataggtacttagggacc
ctacagtccccctccccactcaacttatcccagaacctgtctaatgatgtagaactaaag
ccccaggtcatcaaaactgaagaaagcagtcttgccaccaccctggatatctcggacacc
agctctctgcttggagaactagactacatgactgagtcctcttcccaggacactctgtcc
ccagagctggagattctgtcccaggagatggccaataaaggaccccgccagtcagaaatg
gaactcaggtacctgctgcaaattctattggaggccggttgtctggagtgggcgctgatt
atctcccttgtgctgcgtgacgtggaggctgtggtgaggactgtgaacaccgccagcatg
acggacacgcccctagagatggtggccaggatgagggagggaatctcatacttggaactc
tgggcagacactgagtgcctggggtataaaccattcctacacttcataagaaagcagatt
caggtgttagggaagcttgcagaacaaactcctccgacattacagctgagtacctctgtg
atgaacgatgagagcagtgacagtgaacagctgtccccggtgttacagacaattcacacc
aagaacccagacagctcccctgagcttagccccactcagccacgcgatccagctaaagcc
agtgaatgtgcgatatcttga
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