Crassostrea angulata (Portugese oyster): 128166618
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Entry
128166618 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128166618
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128166618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128166618
03009 Ribosome biogenesis [BR:
canu03009
]
128166618
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128166618
Spliceosome [BR:
canu03041
]
Complex A
U1 snRNP components
U1 related factors
128166618
Complex B
128166618
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128166618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128166618
NCBI-ProteinID:
XP_052687862
EnsemblRapid:
LOC128166618
LinkDB
All DBs
Position
10:7069238..7074908
Genome browser
AA seq
677 aa
AA seq
DB search
MSYRDRMFDSSGRSDRKGFGASSGLPKAFGSSKFGDRGGPRSGGRGGGGGRFGMDRGGMR
GGKMGKGHQPGENLRKPRWDMSRLQKFEKNFYVEHPGVSSRSQMDIDQFYNEHQVTVKGT
GIPKPIFAFEEGGFPDYVMSTFRRLGWTRPTSIQTVSWPVAMSGRDVVGIAQTGSGKTAG
FIVPSIVHINHQPHLQPHDGPIVLVLVPTRELAQQVQEVANDFGHASRIRNVCVYGGAPK
GPQIRDLERGAEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVE
QIRPDRQTLMWSATWPKDVRKLAEDFLKEYIQLNIGALQLSANHNILQIIDVCDENEKEF
KLTKLLEEIMQEKENKTLIFTETKRKADEITRRMRREGWPMMCIHGDKSQQERDWVLNGF
RSGQTPILVATDVASRGLDVGDIKFVINFDYPSSSEDYVHRIGRTARAGQTGTAYTFFTP
DNVKQANDLISVLQEAKQVVNPKLVTLSQSARFGGRKSRFDDKRDKFGRGYGGGGRDRGG
SRGGMGSRGGYGGRGGSSASASRGSGGSSSGFNTRSGGSRFSSSDRGSSGGGRGYGSQSQ
SSGYGGSQSYSQPNGSTSGSYGQQNGYGSQQRGGASSSGANDWSNQMAYMFNSWSGQQPS
AGQPPLPTGNPPPPPPM
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacagagatagaatgttcgattcttcgggacgttctgataggaaaggatttgga
gcaagtagtggtttacccaaagcttttgggtcctcaaagtttggagatcgaggaggtccc
agaagtggaggaagagggggaggtggggggagatttggaatggatagaggtggtatgcga
ggtggtaaaatgggcaaaggacatcaacctggagaaaatttacgcaagcctaggtgggac
atgtcacgactacagaagtttgagaaaaatttctatgtagaacatccaggtgtttccagc
agatcacagatggacattgatcagttttataatgaacatcaagtaacagttaagggcaca
ggtatacctaagcctatcttcgcatttgaagaaggcggatttccagattatgtaatgtcc
acattccgtcgcttgggctggactagacccactagcattcagactgtaagttggccggtt
gcaatgtctgggagagatgttgttggaattgcacagactggttctggaaaaacagcaggg
tttattgtgccatccattgtacacataaatcatcagccacacttgcaacctcatgatgga
cccattgttcttgtattggtaccaaccagagaactggcccaacaagtacaggaagtagca
aatgattttggccatgcttccagaataaggaatgtttgtgtttatggtggtgctccaaaa
ggacctcagatacgagacttggagagaggtgctgaaatctgcattgcaacacctgggcga
ttgattgattttctggaggcaggaaaaacaaacctcagaaggtgcacctatcttgtattg
gacgaggcagataggatgttagacatgggttttgaacctcagatcagaaaaattgtagaa
caaatcagacctgacagacaaaccctaatgtggagtgccacttggccaaaggatgtgaga
aaattggccgaggatttcctgaaagagtacatccagcttaacattggggcacttcagctg
agtgcaaatcacaacattctgcaaattattgatgtctgtgatgaaaatgaaaaggaattt
aagctgaccaaattactggaagaaatcatgcaagaaaaggaaaacaagaccttaattttc
acagaaacaaagagaaaggcagatgaaataaccagaagaatgaggagagaaggctggcca
atgatgtgtatacatggagataaatctcaacaagagagagactgggtcttaaatggattt
aggtctggccagactcccattcttgttgccacagatgttgcgtccagagggttagatgtt
ggagacatcaaatttgtcataaactttgactacccctcctcatcggaggactacgtccac
aggattggacgaactgccagagcaggacaaacagggacagcctacacattcttcactccc
gacaatgtcaaacaagcaaatgatctcatctctgtccttcaagaggccaaacaagtggtc
aatccaaaattggtgactttaagtcagagtgccaggttcggaggtcggaaatccagattt
gatgataagagagacaaattcggtaggggctatggagggggtggtcgtgacagggggggc
tctaggggtggaatgggctctaggggtggatatgggggtcgaggtggaagcagcgctagt
gcaagtagaggaagtggggggagttcatctgggttcaatacgcgatcaggtggcagtaga
ttctctagctcagatagggggagctcagggggtggtagagggtatggttcccagagtcag
agtagtggatatgggggcagtcagagttactctcaaccaaacggatctacctctggtagc
tatggacagcagaatggatatggaagtcaacaaaggggaggagctagtagtagtggggcc
aatgattggtccaatcagatggcctacatgttcaacagttggtctggtcaacaaccgtcc
gcgggacagcctcctctccccacaggaaatcccccaccccctcctcccatgtaa
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integrated database retrieval system
