Magallana angulata (Portugese oyster): 128166836
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Entry
128166836 CDS
T09348
Name
(RefSeq) synaptobrevin homolog YKT6-like isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04130
SNARE interactions in vesicular transport
canu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128166836
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128166836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128166836
Membrane trafficking [BR:
canu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
128166836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF6396
Motif
Other DBs
NCBI-GeneID:
128166836
NCBI-ProteinID:
XP_052688202
LinkDB
All DBs
Position
10:complement(44474386..44485320)
Genome browser
AA seq
198 aa
AA seq
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MKLYCIAVLHKGETKVNSLASAHELSPFGYFQRSSVKEFMDFTCQIVAERTMVGSRASMK
EKEYICHVYVRSDCLTGLVIADHEYPQRVAHTLINKVLEEFTGKVPKSQWPTANQSRIVY
GELAGYLQKYQDPKQADSMTKIQSELDETKIILYDTIEKILERGEKLEDMVDNSDRLSMH
AKAFFQVARKTNSCCVIL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttactgcatagccgttcttcataaaggggagacaaaagtgaactccttggcc
tcagcacatgaattatcaccatttggatattttcaaagatctagtgtaaaagaatttatg
gacttcacatgtcaaattgtggcagagagaacaatggttgggtctagagcatctatgaag
gaaaaagagtacatttgccatgtttatgtcaggagtgattgtctaacgggattagtgatc
gcagatcatgaatacccacagagagtggcccacactcttatcaataaggttctggaagaa
tttacaggtaaagttcctaagtcacagtggccaacagctaatcagagtaggatagtctat
ggagagttagccggttaccttcagaaataccaggatcccaagcaagcagattcaatgacc
aaaattcagagtgaattggatgaaacaaaaattattctgtatgacacgatagagaagatt
ctggagcggggggagaagctcgaagatatggtggacaattcggatagactcagcatgcac
gccaaagcttttttccaagtagcaaggaagaccaactcctgctgtgtaatattatga
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