Crassostrea angulata (Portugese oyster): 128167017
Help
Entry
128167017 CDS
T09348
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128167017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128167017
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128167017
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
HECT type E3
128167017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
128167017
NCBI-ProteinID:
XP_052688467
EnsemblRapid:
LOC128167017
LinkDB
All DBs
Position
10:18169696..18180052
Genome browser
AA seq
1069 aa
AA seq
DB search
MYSFEGDFRRKPVQSLRGASKKEQTDSLLTRAKAERERREEIRQRHSSSLKIQSAYRGHV
VRKRQREILRDEYDKLMSRGIADPASIFNAIRRLCYFYRTDSGKDQDRLIQLCQTVIKQK
DMIKSSVTQSGKSGVFLLQHLLLLCLKNLQNASDTRSWGPPMRMLEIFTSVDTFKDKKKL
LGNIWIFLIKKEYFGSMRHLLEAKVPQSLDKSPTPPTPQAESIFNMIISPIQFAVMSKDK
EFSDLVLKSACFYLFCPAYSEQVEQFLIPAMVYSKFPFPFVELIQSLLQQTSPTPNSSKR
SNVIEPSPWLLGSVIAFADKNIESLSVSDAADFLSVLKTLLPHLPAGVLESNNDSDSDSS
DEEDSVVMISKELREVAEECVKFLNSQKFVRCVVKCLNQEMDAHLLSSVCLICHSLMLQQ
HISIHRLRLLYSLAFNTKFMKALWITCTRVSNTTVTGSQITLLQTLSRGLEMSDEDMQRI
VPLLSVFCSMFSHSLYTLHDADFYGDMKSSKDSSMPFSLRELVPMVLMLRDTCLGIIELA
HPETQRSLTEDYREALRRTAMKDPRDWSVNNKETPYRHTKTWAYLFKVIATLVRQLYTRD
SRRRFCPPNSWLSDRVQIHADKPSQMYRARGSVFCRRPFGTMRHLTKVQIDDDGPPLSNT
DVKNLVILTELPFVVSFEERVKILQKLIQNDKDENQGDAHNFLSGPSINVSIRRNYIYED
AYDKLSPENEPNLKLKMRVQLMNAAGLDEAGIDGGGIFREFLSELLKTGFDPNRGLFLMT
TDRLLYPNPQSVSLMEKYTKHYYFLGRMLGKAIYENMLVEIPFATFFLSKILSRHGGDLD
IHHLASLDPEMYRNLLSLKTLNGKEVEDLGLNFTTVDDNFGIRKEVDLKYNGRNITVTEV
NKIEYIHLMADYKINKQIRTHCTAFRQGMADLINLEWLRMFDHHELQTLISGAMIPVNIQ
DLKQHTHYSGGYTINHPVIQNFWDVVENFTDTQKRQLLKFVTSCSRPPLLGFKDLFPAFC
VHFGGNEEDRLPTASTCMNLLKLPEFHDKETLRTKLTYAIESGAGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgtatagttttgaaggagattttcgaagaaaaccagttcaatctttaagaggggctagt
aaaaaggaacaaacagattccttactaacaagagcaaaggcagagcgagagagaagggag
gaaataagacaaaggcatagctcatcattaaaaattcagtctgcttatcgtggacatgtt
gtaaggaaaagacagagggaaatccttcgagatgagtatgataaacttatgagcagaggg
attgctgacccagcatctatcttcaatgccatcaggagactttgttatttctacaggaca
gactctggaaaagatcaggacagactgattcagctttgccagactgtcatcaagcagaaa
gatatgatcaagtcatcagtgacacagagtgggaagtctggtgtttttcttctccagcat
cttctgttactgtgtctgaagaacctgcagaatgcttctgacactcgatcttggggtcct
ccaatgagaatgctggaaatatttacttctgtggatacctttaaagacaaaaagaagctt
ttgggaaacatttggatatttcttattaaaaaggaatattttggatcaatgagacatctg
ttggaagccaaagtaccacaaagtttggacaaatctcccactccacccacccctcaggca
gagagcatctttaacatgatcattagccctattcagtttgctgttatgtcaaaagataag
gaatttagtgatttggtactgaagagtgcctgtttttacctgttttgccctgcttactct
gaacaagtggaacagttcctgattcctgccatggtttacagtaaattccccttccccttt
gtggagctgatacagtctctccttcagcagacctcccccaccccaaactcctcaaaaagg
tcaaatgtcattgaaccatctccatggcttctgggatctgtaattgcttttgcagacaaa
aatattgagagtttgagtgttagtgatgccgcagactttttgtcggtacttaagacacta
ctaccacacctaccagctggtgtgttagagtccaacaatgacagtgacagtgacagtagt
gatgaggaggattctgtggttatgatctcaaaggaattgcgcgaagttgctgaagaatgt
gtgaagtttttaaattcccagaagtttgtgcgctgtgtggtgaaatgtttaaatcaagaa
atggacgctcatcttctctcctctgtctgtctgatatgtcattctctcatgctacaacag
catatctccattcacagacttaggttattgtatagtttagcttttaacacaaaatttatg
aaagcgttatggataacctgtactcgtgtatccaacactacagtcacaggatcccagatt
acattgctacagacactgtctcgtggactggagatgtcggatgaggacatgcagagaatt
gtccccctgctctctgtcttctgttccatgtttagtcactcactttatacccttcatgat
gcagacttctatggagacatgaaaagcagcaaggatagcagcatgcccttctccttgagg
gagctggtgcccatggtgttaatgctcagggacacctgtctggggatcatagaactggcc
caccctgagacccagaggagtctgaccgaagactatagagaggctctccgcaggaccgcc
atgaaggatcctcgcgactggtcggtcaacaacaaagaaaccccttatagacacaccaaa
acatgggcatatttgttcaaggtcattgcgaccctagtcagacagctttacaccagagat
tccagaagacgattctgtcctcctaactcctggctgtctgacagggtacagatacatgct
gataagccatcccagatgtacagagctagaggatccgtcttctgccggcgtccatttggc
acgatgaggcacctcactaaagtacagatagatgatgatggtcctccattatcgaacaca
gatgtcaagaatctggtgatactcactgaactcccatttgttgtttcatttgaggaaaga
gtcaagattttacagaagcttatacagaatgacaaggatgagaaccagggtgacgcccac
aacttcctgtctggtccctccattaatgtgtccatccgacggaactacatctatgaggat
gcttatgacaaactctcaccagaaaacgaaccaaaccttaaacttaaaatgagagtgcag
ctcatgaatgcagcaggattagatgaagctggtatagatggtggcggaattttccgagaa
tttctgtcggagctcctaaagacaggatttgatccaaacagaggcttgtttctaatgaca
acagacaggttgctgtatccaaatccacagtctgtgtctctgatggaaaaatataccaag
cattactacttcctgggacgcatgctgggcaaggccatctatgaaaacatgctggtggaa
attccttttgctactttctttttatccaaaattcttagtcgacacggaggtgacttggac
attcatcacctggcttctcttgaccctgaaatgtacaggaacttgctgtcactgaagaca
ttaaatggtaaagaagtggaggatctaggtttaaatttcacgacagtagatgacaatttt
ggaattagaaaggaggtagatttgaaatataatggaagaaatattactgtgaccgaggta
aacaaaatagagtacatacacctaatggcagactacaaaatcaacaagcagatcagaacg
cactgcacagcgttcaggcagggcatggccgacctaattaacttggagtggctgcggatg
tttgaccaccatgagcttcagacgctgatatctggtgctatgatccctgtcaacattcag
gacctgaagcaacacacacattactcagggggctatacaataaatcacccagtcatacag
aatttctgggatgtggtagaaaacttcacagacactcagaaacgtcaacttctgaagttt
gtcacaagctgctcaagacctccactgctaggcttcaaggatttgtttccagcattctgt
gtccattttggaggaaatgaggaggacagactccccacagcaagcacctgtatgaacctt
ctaaagctgcccgaattccatgacaaagagaccctcagaaccaaactcacatatgccatt
gagtcaggggcagggtttgaactgagttga
DBGET
integrated database retrieval system
