Magallana angulata (Portugese oyster): 128167106
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Entry
128167106 CDS
T09348
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128167106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128167106
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128167106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
VIR_N
Motif
Other DBs
NCBI-GeneID:
128167106
NCBI-ProteinID:
XP_052688601
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All DBs
Position
10:complement(12384477..12397295)
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AA seq
1342 aa
AA seq
DB search
MSSFMGSPQFSHQDWLENAARQVDKQLQDDRSYQDLSDQLKVPIHNQPSLSGLNELDYPS
LPEAGISIESLCEICNVKRVPLPPELVEQFGRMQCNCMMGLFPSIERAWLTIDSDIFVWR
YEDGTDLAYFDGLNETILSAALVKPKQGIFQPHIQYLLCLATPVDIVLLGVSFSRPYDGA
TSDSGSGEMHLLPEPLFSIPTDNTYIVSITGAPNGRIFMAGKDGCLYELVYQADDGWFSR
KCRKINHSTSTLSFLVPSFLNFSFSEDDPLLQLSLDDSRNILYACTEKGTIQVFDLGQDG
KSMGKVASIPLNNIVHSASLIARTVERSNFKPIVHISALTKSESGNIHLVAITKTGVRLY
FTTNPFGNNKGRPCMLTLVHVRLPPGFSASTTVHKPQNVHMAYHKKGTLLLVASQSEDSD
LLWTVSNDSFPFQVQLMEAHSTVAIEGRTWAMCEVTSGESPTAVDKPDPPTVVTQHSQPP
RQFVLLSAQGSHIFTKMRPVDQLRQLLIDCQGPDAEEVKAFFRLHKLEQACSTCLILACS
RIAADQQVATWATMAFFMYGGEPQLSFTGSAMGTDGRMMPSNLGAMGLHQTSTPAPGMGH
PYFHPAMTPGPNITQEIVFSGKHNGICLYLARILRSIWENNVTTDYPCQTSQGITNYLTS
RINGDDLNKILENVRGLSDFVEFNSRFDTGPSEGMMSQVPFSPHMMGHMDEQGRKKLQAE
AQKMEKVSLQHINDLIRRVEEVLGLWRILVDHQLHIIVSTLSKDQQNQLRGMSFKQLSTH
ATGKEMCASLITCLIDRYLDDNATIDAISCRLREVCPSLYSSDDATCSKANELLQAAKVN
QNQNEKMTQLNEALKLYKEVSQPLQLPVVCNQFALVHFYTGIVDLCLTLAKKRDPQNLAL
HYYRSGEPQEDIQGMTAFMSRMESYNCITDTLAYLLSASVSHPHAPSVPKSPGPPPQPDP
NRMTTYDAEKHKEDVFRMSLKSDDELFHVALYDWFFNASLTEKLLEVQTPFIEPYLKRKA
TCPSEAIGALDMLWKYYEKCKNFSAAARILSRLAERHGTDVNLQQRIEYLSRSIMCAKSS
STRTSSAVEGEFLHELEEKMEVARLQLQVQRAVGKLPSNILNVQYALTSLDSELMDLTRL
YEEFADRFDLSECKLAIVHCAGLYDGALIENLWQNIVDKEIEATTNMNSKLRATNLHNTL
LPIGRLYIKSDRYFPLAFLVKYLEQRSCDLDLNTKWVFLLLLDIGVSPLKLMEIYDRLFK
SRDPYWQQVHKPLRLLEVLHNLLSHICENRAIIPSVERRPFTTTCLDYVSNYLVDLQTMM
STPQQAAVVSHFKRLQAQLERF
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcatgggttcaccacagttctcacaccaggactggttggagaatgcagcc
cgacaggtggacaaacagcttcaggatgacagaagttatcaggatctctcagatcaactc
aaagttcctattcacaatcagccaagtttgagtggattgaatgagctggattatcccagt
ttaccagaagctggtatttctatcgagagtctgtgtgagatttgtaatgtgaaaagggtc
cctctacccccagagctggtcgagcaatttgggcgtatgcagtgtaattgtatgatgggt
ttgtttccctccattgagagagcatggctaaccattgacagtgacatctttgtctggaga
tatgaagatggaacagaccttgcttactttgatggattaaacgagaccatactgagtgct
gccctagtcaaacccaagcagggtatattccagccccacatccagtacctactctgcctt
gccactcctgtggacattgtcttactgggggtcagcttttctaggccatatgatggtgct
acgtcagacagcggtagtggagagatgcacctccttcccgagcccttgttctcaatcccc
acagacaacacgtacattgtcagcatcactggggcccccaacgggagaatcttcatggca
ggcaaagatggttgtttgtacgagttagtctaccaggcagatgatggctggttcagtaga
aagtgcagaaaaatcaaccactcaaccagcacattgtctttccttgtgccatcttttctc
aacttctccttcagcgaagatgatcctttgctccaactgagtctagatgattcaagaaat
attttgtatgcctgtacagaaaaaggaacaattcaggtgtttgaccttggacaggatggg
aagagtatgggcaaggtcgcatctattcctctgaacaacatagtacacagcgcctctctt
atagcaaggactgttgagcgctcgaacttcaagcccattgttcacatcagtgccttgaca
aagtcagagtctggaaacattcatctggtggctatcacaaaaactggggttcgactgtat
ttcacaactaacccgtttggtaacaacaaggggcggccttgtatgctaactctggttcat
gttcgcctgccgccagggttctcagcctcaaccactgttcacaaaccacagaatgttcac
atggcttatcacaagaaaggcaccttgcttctggtggcctcccagtctgaggacagtgat
ctattgtggacagtcagtaacgactcgttcccattccaagtacaactgatggaagctcat
agcactgttgctatagagggtcgtacctgggctatgtgtgaagtcacctcaggggagagc
cccactgccgtggataaacccgaccctcccacagtggtcacccagcactcacagcctccc
cgccagttcgttctcctcagtgcccagggaagtcacatcttcaccaagatgcgtccagtt
gaccagctgcgccagctgttgatagactgtcagggcccagacgctgaggaggtcaaggcc
ttcttcaggcttcacaagcttgagcaggcttgttctacatgccttattttagcctgttct
aggatagcagcagatcaacaggttgccacctgggctaccatggccttctttatgtatggg
ggtgagccccagctgagtttcactgggtcagcaatgggtacagatggtcgtatgatgcca
agtaatctgggagccatgggccttcaccagacatctacaccagctccaggaatgggtcat
ccctactttcaccctgccatgacgccaggacctaacatcacccaggagattgtcttctca
gggaaacacaatgggatctgtctgtacctggccagaattctcaggtccatttgggaaaat
aatgttaccacagattatccttgtcagacctcacaaggaatcacaaattatttaacgagc
agaataaatggtgatgatttgaacaaaatacttgaaaatgttagagggctctcagacttt
gtggaattcaactccaggtttgacactggaccatcagaagggatgatgtcacaagttccc
ttttctccacacatgatgggacacatggatgaacaaggacgtaaaaagttgcaagcggag
gcccagaaaatggagaaggtgtcattgcaacacattaatgacctgatcagacgtgtggag
gaggtgctggggctgtggaggattttggtagatcaccaactccacatcattgtctccaca
ctgtcgaaggaccaacagaatcagctgagaggaatgagttttaaacaactttcaactcat
gcaactggaaaagagatgtgtgcatctttgatcacctgtttgattgatcgctaccttgat
gacaatgctactattgatgccataagttgtagactgagagaagtgtgcccatctctttat
agctccgatgatgccacttgttcaaaggctaatgagctcttgcaagctgccaaagtcaat
cagaatcagaacgagaagatgacacagttaaacgaggcattgaaactgtacaaggaggta
tcccagcccctacagctaccagtggtctgtaaccagtttgcattggtccatttctacact
ggcatcgtcgacctctgtctgaccttggccaagaagagagacccccagaacctggccctg
cattactacaggagtggggagccccaggaggacatccagggaatgactgctttcatgtcc
aggatggagtcttacaactgtataacagacaccttggcgtacctgctctctgccagtgtg
tcacaccctcacgcccccagtgttcccaaatctccagggcctcccccccagcctgacccc
aacaggatgacaacatatgatgctgaaaaacataaagaggatgttttcagaatgtcactg
aagtcggatgatgagttgttccatgtggctctgtatgactggttcttcaatgccagtctc
acagagaagctgttagaggtgcagactcctttcattgagccatatttaaaaagaaaggcc
acctgtccatcagaggctataggggcgttggacatgttgtggaagtattacgagaaatgt
aaaaacttttcggcagcagcgagaattctgtcacgactggctgagagacatgggaccgat
gttaaccttcagcagagaatagagtacctgtctagatctatcatgtgtgccaaaagttcc
tccactcggaccagctcggcagtggagggggaattcctgcatgaactggaagagaaaatg
gaggtggcacgtctacagctccaggttcagagggcggtgggtaaactcccaagtaacata
ctcaacgttcagtacgctcttaccagtctagactcggagctcatggacctgaccaggctg
tatgaggagtttgctgacagatttgacctctctgagtgtaagctggccattgttcattgt
gctggtctgtatgatggagctctcattgagaatctctggcagaacatcgtcgacaaagaa
attgaagcaaccacaaatatgaattcgaagctgagagcaacaaatctacataacactctg
ttgccgattggaagattgtatatcaaatcagacagatactttcctctggctttcctagtg
aaatacctagagcagagaagctgtgatttagatttgaatacaaagtgggtttttctcctt
ttactggatattggtgtctcccctttgaagcttatggagatatatgaccgactgttcaag
tctagggacccatattggcagcaggttcataagccgttgagattgttggaagttttacat
aatttgttgtcacatatatgtgagaatcgtgcaatcatcccatctgtggaaaggcggccc
ttcaccaccacctgtctggactatgtatcaaactacctggtggacctgcagacaatgatg
agcaccccccaacaggcagcggtggtcagccacttcaagcgccttcaggctcagctcgag
aggttttga
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