Magallana angulata (Portugese oyster): 128167337
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Entry
128167337 CDS
T09348
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128167337
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128167337
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128167337
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
128167337
NCBI-ProteinID:
XP_052688963
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All DBs
Position
1:21441329..21446225
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AA seq
586 aa
AA seq
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MTDTTWRELPVSLSDTIHQTLRDGGFLYPTPVQATCIPLFLTNKDVAAEAVTGSGKTLAF
VVPVLEILRKRGSWTKKEIGAIIITPTRELAIQIHGVLSPFLTHIPELSSLLLIGGENHV
KDAEKFKANGGNIIIATPGKLETMLEKPQHGLNLAASVRSLEVLVLDEADQLLDLGFEAS
INTILSYLPKQRRTGLFSATQTDELENLIRAGLRNPVRVNVKEKKRDDGKMEQRTPSTLE
NFYMIVESDEKFNQMMNFIQARKKEKIMIFFSTCAGVDYFSKMLQLLLKNTQVLCIHGKM
KNKRNKVFAKFRSLESGILVCSDVMARGVDIPEVNWVIQYDPPKSANFFVHRCGRTARIG
NSGNALVFLLPAEDTYLNFLKINQKVELQRIDPCDSVNNYLPKLRKFALKDRALLEKGAR
AFVSFVQFYIKHECGLIFRIKDLDFGKLANGYGLLRIPKMPEVKGKDVSNFVPVEADFSK
IAYKDKQREKQRQLKVQSEEPKQSKLRRPPRSQAWSKQKERKDRKKKRREVKEISRKRKA
QDAEAADEEEEDDFQDDVKLMKKLKRGKISKEEFDSQFAPSDGEED
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccacgtggagagaattgcctgtgtctttaagtgatacgatccaccagact
ctacgcgatgggggatttttgtaccccacacctgtgcaggctacgtgtatacctttgttt
ttaactaacaaagatgttgcagccgaagcagtcacaggcagtggtaaaacattggctttt
gttgtaccagttcttgaaatcttaaggaaaaggggtagctggacgaaaaaagaaatcgga
gccatcataatcactccaacaagagaacttgccattcaaattcatggggtcttatcgcca
tttttgacccatatacctgaactatcttctttgctgctcattggaggtgaaaatcatgtc
aaggatgcagagaagttcaaggctaacggtgggaatattattattgccacaccaggaaag
ttggaaaccatgcttgaaaagcctcagcatgggttaaatttggctgcaagtgttcggtcc
ttagaagtcttggttttggatgaagcagaccagctcttggacctgggttttgaagccagc
atcaacacaattttaagttatcttccaaaacaaagaagaacaggtctattttctgcaacc
caaactgatgaactggaaaatctcatcagggctggacttagaaacccagtaagagtaaat
gtgaaagaaaagaagagagatgatgggaaaatggaacaaaggacaccctcgacgctagaa
aatttttacatgatcgtagaaagtgatgaaaagttcaatcaaatgatgaatttcattcaa
gcaaggaagaaggagaaaatcatgattttctttagcacatgtgcaggagttgattatttc
tcgaaaatgttacagcttttattaaagaacacacaggtgttatgcatacatggaaaaatg
aagaacaagagaaacaaagtgtttgcaaagtttagatctttagaaagtggaatattagtg
tgcagcgatgtaatggcccgtggggtggatattccagaggtgaactgggtaatacagtat
gatccgcccaaatccgccaacttctttgttcacagatgtggaaggacagcaaggatagga
aactcaggaaacgctttggtgtttcttcttcctgcggaggacacttacttgaacttctta
aaaatcaaccagaaagtggagttacagagaatcgatccgtgtgacagtgtgaataattac
ctgccgaagctaagaaagtttgctctgaaagaccgagctctgttggaaaagggggcaagg
gcatttgtgtcctttgtgcagttttatatcaaacatgaatgtggacttattttcagaata
aaggacttggattttggaaaacttgctaatggatatggacttttacgcattccaaagatg
ccagaagtgaaaggaaaggatgtatctaattttgttcctgtggaggcagatttcagcaaa
atcgcatacaaggacaagcaaagggaaaagcagagacaattaaaagtgcagtctgaggaa
ccaaaacagtccaaactccgcaggccacctagatctcaagcctggtccaaacagaaagaa
aggaaagaccgcaagaaaaagaggagagaggttaaagaaatctccaggaaaaggaaagca
caggatgcggaggcagctgacgaagaggaggaggatgatttccaagatgatgttaaacta
atgaagaaattgaagagaggaaagatttcgaaggaggagttcgacagtcagttcgctccc
tctgatggtgaagaagattga
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