Magallana angulata (Portugese oyster): 128167341
Help
Entry
128167341 CDS
T09348
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128167341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128167341
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128167341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
128167341
NCBI-ProteinID:
XP_052688966
LinkDB
All DBs
Position
10:52603389..52614574
Genome browser
AA seq
554 aa
AA seq
DB search
MDGTIGDVYNKEVHRWRTGAAITWAVITVPIILSGYVTLAHLDVSHPSQWISGSLSLLFS
VYYLLMCVVVIFLTGLWGSFSLPTFIVEPEVYSNPLQLTASMCSPQKLLFGVVCVLLSGV
TSLLCTGILDGRYQDLTVCTNRDFCVLNEHHLFLVTYGCYTGAVFYLFHFLRQNNYLQFT
SLQQSKYFQVRSGILRVLQTSLHCVLWQTAYFYPLYWLFGHIPTEWIVHSLGLRRSTLPV
DSVYGLLDLALLWQSVLCGLLVHVSWSLTTLLIKVYITERFCFPIESMLDDRKNQCLIDA
LQCDQNPVVKYLGYLDLCLLSKHSPERRRTVFSLSQPGGHPHNWSKLSTSCLSAITALSG
RIQDANWQVFSQASVRQATDDIKKSATSHQGSTLTYRGDSVKKDTTTPQPAKNGSSFWKT
KPVISYFLTEFPDAKSRKLFASAQLDIWAVEALCNLVAASFREDNYGVVQKTLPQILTSV
IKLQENVEKHLKLVSSGRRNGGRGSLDLPLKYVLHSSLKSCIYRIINVFGAHLLNLDLPS
DTSYKLKLFMDFKE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatgggacgataggcgatgtttacaataaagaagtacatcgatggagaacgggagct
gcaataacctgggctgtcataacggtccccataatattgagtggctatgtaacattggct
catcttgatgtgtctcatccttctcaatggatttcaggcagcttgtccttgctcttctca
gtgtactacctcctgatgtgtgtggtggtgatctttctgaccgggctctgggggagcttc
tccctcccaacattcatagtggagccagaggtctactccaaccctttacagttgacagcc
agcatgtgctccccccagaagctgctgtttggggtggtctgtgttctcttgagtggggtg
acttccctgctgtgtacagggatcctggacggtcgctatcaggacctcaccgtttgcacc
aacagagatttctgtgtactgaatgagcatcacctgttccttgttacctatggctgttat
acaggtgctgtattttacctgtttcatttcctcagacagaacaactacctacagtttact
tcattacagcaatctaagtacttccaagtgcggagtgggattctgagagtccttcagacc
tccctacactgcgtgctgtggcagaccgcctacttctaccccctctactggctctttggt
cacattccaacagagtggatagttcacagtttaggactaaggaggtctacattacctgtg
gactcagtctatggcctgctggacctggctttgttatggcagtccgttctctgtggcctg
ttggtacacgtttcctggagtttgaccacactgctgatcaaggtctacattacagagcga
ttttgtttccccatcgagagcatgttggacgacagaaagaatcagtgtctcatagatgct
ctacagtgtgaccagaaccctgttgtgaagtacctgggctacctggacctgtgtctgttg
tccaaacactcacctgagagaaggaggacagtcttcagtctcagtcagccaggaggacat
ccccacaactggagcaagctgtccacttcctgtctgtcagccatcactgctttgagtggg
cggatccaggacgctaactggcaggtgttctctcaagcctctgtacgacaggcaaccgat
gacatcaaaaaatcagccacgtcccatcagggatcaacactaacatacagaggtgacagt
gtaaaaaaagacaccacaactccacagccagctaaaaatgggtcatctttctggaaaaca
aaacctgtgataagttacttccttacagagtttcctgatgccaaaagtagaaaactattt
gcctctgctcaacttgatatatgggcagtggaagctctatgcaatcttgtggcagcatca
ttcagggaggataactacggagtagttcagaagaccttgccacaaatccttacttcagtc
ataaagctacaagagaatgtagagaagcacctgaagctggtgtcctctgggcgacgtaat
ggggggcggggatctctggacctccccctcaagtatgtgctccacagctcacttaagtcc
tgtatctacagaatcatcaacgtgttcggggctcatttgttaaatttggacttacccagt
gacacttcttacaaactcaagttgttcatggattttaaggagtga
DBGET
integrated database retrieval system