Crassostrea angulata (Portugese oyster): 128167632
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Entry
128167632 CDS
T09348
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
canu
Crassostrea angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128167632
03012 Translation factors [BR:
canu03012
]
128167632
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128167632
Translation factors [BR:
canu03012
]
Eukaryotic type
Initiation factors
eIF-3
128167632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
128167632
NCBI-ProteinID:
XP_052689411
EnsemblRapid:
LOC128167632
LinkDB
All DBs
Position
10:38424500..38430924
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AA seq
701 aa
AA seq
DB search
MAADRGSDSESRRHRKSESQSQGSVNGDEIEEPDFSDPEGYVDDISEEELLGDLLRSKPK
ESDGIDNIVVVDNVPQVGPDRQEKLKNVIRKIFEKFGKINREFFPVTNEKTKGYVFIEYT
SPLHASEAVKMANGYKLDKQHTLQVNIFSDFDKYEKIPEEWEPPKPKPYHDVGNLRYFLQ
EPDCYDQFSVIYDGGDRTAIFKNTAREPVLIEERARWTETYIRWSPQGTYLATFHAKGIA
LWGGEKFEQIMRFSHPGVQLIDFSPCERYMVTFSPILSTQEDQQQIIIWDIRTGMKKRGF
HCETQSTWPILKWSNDGSYFGRITPDTLSVYETPSMGLLEKKSLKITGLRDFSWSPSDNI
IAYWVPEQQNVPARVTLIQMPSRQELCIKNLFNVADCKMHWQKNGDYLCVKVDRYSKAKK
IDEKDQFKYSGLYYNFELFRIREKQIPVDKVEVKENVIAFAWEPVGSRFAFIHGESPRIS
VSFYQIRPGKVETIKTLERKQANHLFWSPTGQFIVLAGLRNMNGVLEFVDASDVTVMAQT
EHFMATDVEWDSTGRYVVSAVSWWGHKVDNGYWIWSFQGRLLQKIQLERFCQLLWRPRPP
SLLSLEQMRAIKKNMKKYTEQFEVMDRLRQSNVSTEILEKRSEMMNEYKSFRERATEEWE
SMKYRRLELRDGVDTDTLEYEENDEEIVEFLLKVEEVVVEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacaggggctcggatagcgagtcaagaagacatagaaagtctgaatcgcag
tcacaagggagtgtaaatggtgacgaaatagaggaaccagatttcagcgatccagaggga
tacgtcgatgacatttctgaagaagaattgctaggagatttactgaggagcaaacctaaa
gaatctgatggcattgataacattgtcgtggtagataatgttccccaagtaggacctgac
agacaagaaaaactgaaaaatgtcatcagaaaaatcttcgagaagtttggcaaaatcaac
agggaattttttccagttactaatgaaaagacaaaagggtacgttttcattgaatacacc
tcacctctccatgccagtgaggctgtcaagatggcgaatggatacaagcttgacaagcag
catacccttcaagtgaacatcttttctgactttgacaagtatgagaaaatcccagaggag
tgggaaccacctaaacccaaaccttaccatgatgtcggaaacctgcgctacttcttgcaa
gaaccagactgttatgatcagttcagtgtcatttatgatggaggagacagaacagctata
ttcaagaacactgccagggaacctgtgcttattgaagaaagagcaaggtggactgagacg
tacattcgctggtcaccccagggaacctacctagcaaccttccatgctaagggcatagct
ctgtggggaggggaaaagtttgaacagatcatgaggttcagccaccccggggttcagctg
atcgacttctctccctgtgagcgatacatggtgacgttcagccccatcctttccacccag
gaagaccagcagcagatcattatctgggacatcaggactggcatgaagaagcgaggcttc
cactgcgagacacaatccacctggcccatactcaagtggagcaatgatggaagctacttt
gggaggattaccccagatactctcagtgtttatgaaacaccatcaatggggttgcttgag
aagaaaagtttgaaaattactggactgagggacttttcctggtctccctctgacaacatc
atagcctactgggtgcctgaacagcagaacgtaccagctagagtcactctcatccagatg
cctagtcgccaggaactgtgtatcaaaaatctcttcaatgtcgctgactgcaagatgcac
tggcaaaagaatggggactacttgtgtgtcaaagtcgatcgctactccaaggccaagaag
attgatgagaaagaccagtttaagtacagtggtctttattacaatttcgagctgtttaga
attcgagaaaagcagattccagtggataaggtagaagtcaaagaaaatgtgattgcattt
gcctgggagcctgttggcagtcgatttgcatttatacatggagaatcgcccaggatttca
gtttcattttaccagatcagaccagggaaagtggaaactatcaaaactctggaaagaaaa
caagcaaaccacctgttctggagtcctactggacagtttattgttctagcaggattacgc
aacatgaatggagtgctggagtttgtggatgcctctgacgtgactgtgatggctcagact
gagcacttcatggctacagacgttgagtgggactccacaggcagatacgtggtgtccgcc
gtcagctggtggggacacaaggtcgacaatggctactggatctggtctttccaagggcgt
ctgctgcagaaaattcaactggagcgattctgtcagttgttatggcgaccacgccctccc
tccttgttgtctctagaacagatgcgcgccattaagaagaacatgaagaaatacactgag
cagttcgaggtcatggacagacttagacaatccaatgtttctactgaaattcttgagaag
agaagtgaaatgatgaatgagtacaagagcttcagagaacgagccactgaagagtgggag
agtatgaaatacaggagattagaactcagagacggggtggatacggacacgttggagtac
gaggagaacgacgaggagattgtagagtttttgcttaaagtcgaagaagtcgtggtggaa
gagtaa
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