Magallana angulata (Portugese oyster): 128167986
Help
Entry
128167986 CDS
T09348
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128167986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128167986
Enzymes [BR:
canu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128167986
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128167986
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128167986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
Cdd1
HHH
NTP_transf_2
5_3_exonuc
Phasin
DUF4332
Motif
Other DBs
NCBI-GeneID:
128167986
NCBI-ProteinID:
XP_052689980
LinkDB
All DBs
Position
10:48920366..48925980
Genome browser
AA seq
338 aa
AA seq
DB search
MSKRKNATTENPNKDFCDFLMELANYEKNVNRQMHKYNAYRKAVGVLAKHPTRIKSGAEA
KKLDGIGDKIAKKIDEYIDTGSLRKLEKIRADDTSVAINELTKVTGIGPAAAQKLVQEGI
TSIEELRKHPDKLNHHQQIGLKHFEDFEKRIPRAEMEQIQDTAFSEIRKLDDKFEARVCG
SFRRGAESSGDIDILLTHPDYTSKTKGKPDLLHQVVKRLEKVGLITDTLVHGDFKFMGVC
CVLESSPGSSKKRCFRRIDIRLIPHDQYYCALLYFTGSDIFNKNMRAHALEVGFTLNEYT
LRPLGSTGTPGEPLPVTSEEDIFDYLGMEYKQPYQRNS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagaaagaatgcaacgacagaaaatcccaataaggatttttgtgatttcctg
atggaactggccaactatgagaagaatgtcaacagacaaatgcacaaatacaacgcatac
aggaaggcagtgggggtactggcgaaacaccccactcgtatcaagagtggggcagaggct
aaaaaactggatggaattggtgataaaattgcaaagaagatagatgagtatatagataca
ggatccttgaggaaattagaaaagatcagagcagatgacacaagtgtggcaattaatgag
ctcaccaaggtcacaggaattggacctgctgctgctcagaaattggtccaggaaggaatc
acttccatagaagaattgcggaaacatccagataagctgaaccaccaccagcagattgga
ctgaaacattttgaagactttgaaaagagaattcctcgagctgaaatggaacagattcag
gacactgccttcagtgagatcaggaagctggatgataagtttgaggccagagtctgtggc
agcttcaggagaggtgctgaatccagtggagatattgatattcttctgacccatccagac
tacacctcgaaaaccaaaggaaagccagacctgcttcatcaggttgtgaagagactggag
aaggttgggctcatcacagacacgctggtccacggagacttcaaattcatgggtgtctgt
tgtgttttggaatccagcccaggttcctccaaaaagaggtgcttcaggaggatagacatc
aggttgattccccatgaccagtattactgcgctctgctgtatttcacaggaagtgacatc
ttcaataagaacatgagagcacatgctctggaggtcgggtttaccctcaatgaatacacg
ctccggcccctcggtagcacagggactcctggggagcctctacctgtgacatcggaggag
gacatctttgattatttaggaatggagtacaaacagccataccagaggaactcttga
DBGET
integrated database retrieval system