Magallana angulata (Portugese oyster): 128168045
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Entry
128168045 CDS
T09348
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128168045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128168045
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
128168045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
128168045
NCBI-ProteinID:
XP_052690087
LinkDB
All DBs
Position
10:30513238..30525324
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AA seq
516 aa
AA seq
DB search
MATSSTASQPGSSNSTTQEFTVRVPKDRKKKFKMMKFSTGNDVDFVKMSQTPIRMERENN
YKEFKSAYDIDVAPKFGAGSEYGREQKEEARRKKYGIVSRKYKPEAQPWILKIGKNKEMK
KMKGVREGTITENTSYYIFTQCADGAFEAFPVEEWYTFSPVIKYKYLNSEEAEEEFSRRD
KTLNLFSVMVRNRVRNEDDETNPDEEEKVKTKTKKSKKKEKSEFLITEDEEWANFSDDGN
EDEEDGEGPEEEDDDDPKSKKKGKKNAKGKRNAKHNSDDEAVEESDEGDFDDKEVDYITD
SSSDDEMEDREKKDVYEEKGVDEERGLRKLIDSEEESEEEEDKKSEKAEEEEEDEKAKKE
KKKDDGTDSSSSSSSESDSDIEREENLASVIFMQKGKKERNSPVPQSGAPGTVDGDDKKA
LKRKLESEDVSSKKSRTESPGASGKATSAGITEEAIRRYLMRKPMTAKELLKKFKSKKVN
MSKEEMTSTLTKYLKKIQPEKKTINKKMYFSLKKDG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccacaagtagcacggcaagtcagccaggatcatctaacagcacaactcaagagttt
actgtgagggtgccaaaagacaggaaaaagaaattcaaaatgatgaagttcagcactgga
aatgatgttgactttgtcaaaatgagtcagacaccgattagaatggaaagagaaaataat
tataaagagttcaagtcagcttatgacattgatgttgccccaaaatttggagctgggagt
gagtatgggcgggagcagaaagaagaggccaggcgcaaaaagtatggaattgtgtcacgc
aaatacaagccggaagcccagccatggattctaaaaattggaaaaaacaaagaaatgaag
aaaatgaagggagtgcgggagggaacaatcacagaaaatacttcctactatatttttact
cagtgcgctgacggggctttcgaggctttcccagtagaggagtggtacacattcagtccc
gtcatcaagtacaaatacctcaactcagaggaggcagaggaagaattcagcagacgagac
aaaactttaaatctgttctcagtaatggttagaaatcgggtcaggaatgaagatgatgaa
actaatcctgatgaagaagaaaaagtcaaaacaaagactaaaaagtccaagaaaaaggaa
aaaagtgaatttttgattactgaggatgaagaatgggctaacttttctgatgatgggaat
gaggatgaagaagatggagagggacctgaagaagaagatgatgatgatcccaagtcgaaa
aagaaaggaaagaaaaatgctaaagggaaaagaaatgccaaacacaattctgatgatgag
gcagttgaggaaagcgatgaaggggattttgatgacaaggaggtggattacatcacagac
tcaagcagtgatgatgaaatggaagacagagagaagaaggatgtttatgaagaaaaagga
gtagatgaagagcgaggtctaaggaaactgattgattctgaagaggagagcgaagaggag
gaagataagaaatcagagaaagctgaagaagaggaggaggatgaaaaagcaaagaaagag
aagaagaaagatgatggtacagatagcagtagcagttctagttcagagagtgactcggat
atagaaagggaggaaaacctggcctctgtcattttcatgcagaaaggaaaaaaagagcga
aattctcctgtacctcagtctggcgctcccggcacagtggatggagatgataaaaaagca
ttgaaaaggaaattagaatcagaagatgtctcctcaaagaagtccagaacagaaagccca
ggggcgagtggcaaggcaactagtgctggaataacagaggaggcaattcgccgatatttg
atgagaaaaccaatgacagcaaaagaactgctgaaaaaattcaaatccaagaaagtgaac
atgagcaaggaagagatgacaagcacacttacaaagtacctgaagaagattcagcccgag
aaaaaaaccatcaacaagaaaatgtacttttctctcaaaaaagatggatag
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