Magallana angulata (Portugese oyster): 128170560
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Entry
128170560 CDS
T09348
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128170560
09123 Folding, sorting and degradation
03018 RNA degradation
128170560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128170560
03041 Spliceosome [BR:
canu03041
]
128170560
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128170560
mRNA degradation factors
5'-3' decay
Lsm complex
128170560
Spliceosome [BR:
canu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128170560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128170560
NCBI-ProteinID:
XP_052692306
LinkDB
All DBs
Position
2
Genome browser
AA seq
113 aa
AA seq
DB search
MSQAPKQTQQGGDKDKEKKKKETILDLAKYLDKTIRVKFSGGREAAGVLKGYDPLLNLVL
DDTTEYLRDPDDPYKLTEDTRTLGLVVCRGTSVVLICPADGMEAIANPFVQQE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggctccaaagcaaactcagcaaggaggagacaaagataaggaaaagaagaag
aaggaaacgattttagaccttgcgaaatacctcgacaagacgatcagagtgaagtttagt
ggtggaagagaagctgctggtgtgttaaagggttatgaccctttgttgaatctggtactg
gatgacacaacagaatacctcagggatccagacgatccatacaaactgactgaggacaca
agaactctgggattggttgtatgtagaggaacctctgtagttcttatctgtccagccgac
ggaatggaagccattgccaaccctttcgttcaacaagagtga
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