Magallana angulata (Portugese oyster): 128170585
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Entry
128170585 CDS
T09348
Name
(RefSeq) intermembrane lipid transfer protein VPS13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128170585
Membrane trafficking [BR:
canu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128170585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
128170585
NCBI-ProteinID:
XP_052692320
LinkDB
All DBs
Position
2:20353275..20440965
Genome browser
AA seq
3273 aa
AA seq
DB search
MVFESLVADLINKYLGDFVENLDRSQLKIGIWGGDVVLQNLDLKESALDDLDLPVKIKAG
HIGKLTLKIPWKNLYTESVVASIDGLYALAVPNVAIKYNAEKEEKAKQESKQRKLLQIEE
AKKAATDKGKEKEPKKDSFAEKMAAQIIKNLQIQIRNIHVRYEDAYTDPKHPFSIGVSLA
ELLFQTTDENWKPCVVKEAVNQIFKLVKLDSLAVYWNSSSEQYASLSNERLLERLGKEIA
GQDKTSAYQFLIKPISSVAHLKLNMKPELNNFTLPKAFLTVVFDEIGIGLSKLQYNDVLN
MLESFERMYLMSVYRKYRPDVPLHKHAKTWWHFARDSVLEEKVRRRRQMFSWGHIIHHRT
VMKKYRDAYTKKLSNPKKVPQDVQKGIEEYEKVLDVFSITLMRSQAEVEAAKLGAKKAEE
KSGGWFGGFFGGSKKKKAGKEEQDIKEQFEKEFSEKEKAKLYEAIGYQENEVDPALPREF
VAVRLVTKLSTLSLTLTDETKKEPQILKLQLKDVYASVGQRPAESAIQVEGKIDRLQVVG
SPQDGSTPKMVMSQNQEKDKVYALLNFNLETNPLDKKCDTRVIVESRPLQIVYDAISINN
MADFFKPPKEVYLKQLSRAAMAKFEDIKEQSATGLKHAIEQHKYTDIRVDLKPSYVIIPH
GGVYKKGAVNMLILDLGNLKVNSEKNKVGGDDKSKLWSNSRKILYPKMAMAVEEVMSRAY
DNFKIKLDRVQLLYAKPGEDWNSARLAGTSPQHVLLPISINLLLQKSMFDNDRRLAKMKM
SGDLPLLSLSLSDLRLQEILQLAQSIPLPEAGDEDQELEDMDVFSDALDIPLDVNENRIM
KKVVNVSAEMAEQEGESGPPRPQDVVNRTILEMKFEIKEVSVCLQEHTEDGDIPMIKLVL
TTMGTNVTTRKFDMEAEAYLGGIYLQNLKFKATESLNQQLDSLTSSVLEGGPLINLINTP
TNEETRLLTFTFHKADPEGPEFESTFENTEQKIGVTFTSLEVLLHQEALLSVMKFAAQLQ
KSLQVEESPTKEAKTNADAQKKKEEQSKTAKDKQAGSKGSQKKGKVKDTERINLRVTAEL
EGFGVAVCTNNTVITNARINGISAGVVIQDSKTVVTSELREVTVYDSNTKTKYPKIVEIK
GDAVLKLNLTIYNNATEGDKYSDMSCVDTSVDVQLGCIRGVFLMRFVSDLLEYLNGFQVE
ELESQIEAAKGKVREASEAVTESAKVAMAQLAEKSPRVSIKVSMSAPVILVPQRSDSLNV
LMVDFGHLHVSNSFSPFKTDAKIPAVLDAMKIDLKSLKVARAELSTEKEVVGQCLVLEPV
SLNLSVTRNLAFGWYKEIPAVDIGGQLESIEATMSQGDYKVIMTLLSDNLSEGQKSDTVA
GSSKVKDTEMTPAQGQTVDTEKTTTAGAPAITLTPPEQSDTYKLHTQLKFQFQINSLSAT
LYSGESTLTTDGQNSRSADQALGQFMIEVVGVKGEMKSDGSLTTSVILKDTVVDDKRKQK
QEAGIKSSHPPIRMIERVTSGGKKNDMIDVQFTQDPSQNKDVNVKVCSIRVVVCLDFLMP
LADFFTSGLPDSKPAPPTTGNAHSKVATPSKPPPPPPPTSEMSVTVSMETPEIILIEDQM
DPASNSLLLSMGVEFRMRVTPETQDMSASVNSLQIASAIFNEREKRRAQILNPCDISFYS
KTPQGKSPHMDISTSDLILNISPRTIRTITLITANLSKQEESENDKEKQKVPADLWNTKK
LSERKFWFLKDPSAEELPDIDMFSPDITLDEIERGEQGPSEMLIIKVPNIVVKLEGGVGK
RTVPLLIAETSFDAQVRDWSSKLEVESNMRLEVAFYNEKLSVWESLVEPVVENGKMKKWD
LGLQVTKNDELAPEDDEEDEDSKNIVLPPPKMSINVRSNDPMEVTVTKTCLEVLNNLAKA
FGDAYRLVAPAEEAGKILSPYVIYNNTGLPVVLKLDNAFEMPPEVKNGKVTLETDQSLPL
YGRQKAVLKRQASVIKATQEGDEKKFIFQIEQFGATREVTIKRSERRLYPVNHKTYPGDT
WAVVCSIEAPIGQKILHLRSIVQMKNHLPNAVELFSRHGQDVKSCGVIEPGEKFHVPLSD
VYTPEGYFLLKPKDSGCEMSQTPFSWRGAENSPKVYLSCKFKDGSDYVICVRSEVINVYF
DETEKLSAKTYLFHLSPTIVFHNLLNIPVTFLLEGMASEVSLGKGENKPLLHAMPGHSHI
EVKIPAYQDLEWHGTQLLSTEFPELSMWTFSALFKGPQKISLILGLHCKENEGCLDMSIY
SPYWMVNKTGMTLYYKGSDSDDVIEHSPDHQEVAFFSFKPKTCLGGKKKETKPQKENSKE
KVKEWRQVGKASLRIADADWSDKFSLDTVGSSGTIQSKTKSRVYEAGVKIRLSSSGLTKI
CTFTPLYMLLNTSEVKLLCAETTKQDEWTQIPPKSCLPFWPLHSGKEMTMVAKVDGSAYS
TTPFYFNKPHTTLMRVDDEVGGINVDCQVTEAATVTSLTTYKPGMATVLMINSTDRAVVK
YNQCGEKSAHVVNPMECVLYTWENAIGKRELEWSSGEVKSQKTSLIQDGTDSFFLDSDTK
IFWVSFLDGLQRVLLFTEDLAVAINAQEAGELERIEQEINLSLHSMGVSLVNDTTQTEVA
YLGITSSGVIWEEKKKRYKALNGKTTGLLEAAYQKYVMEIELGHRPPEKIALDNKMEVNF
QEMRMIKPNNRGIRRSFQDGVWIQYKTSPHQLQVHAKINRLQLDNQTYIYVFPTVLAPIP
PPKSVASDSVPKPFAEVSILSRKHEHSNMQQFKYFKVLVQEMSLKVDQGFLNNIIDFFTS
SQQVSRDQEKEMLEADLKTVYTELLDEAGLSLAEEQKNFFDYLHFSPIKIHLSFSLQGGG
GGDGKAVHLHANIINVFLQSVGVVLTDVQDVVFKLGYFERKNTFYNQSQLTSEMGRHYAG
QAVKQLYVLVLGLDVLGNPFGLLRGMAEGMEDLFYEPYQGAIQGPEEFAEGLALGVRSLL
GHAVGGAAGAVSRITGTIGKGLAALTFDDEYQKKRREGLNKKPANIGEGFARGGKGLVMG
VFDGVTGIVRKPIEGAQKEGVEGFFKGIGKGLVGVVTRPTSGVIDFASSSFEGIKRIAEL
SDDVGRLRPPRRFHSDKIIRPYSLVEASGYAILQETEKGKFAGTDEYMAHSVIIGDSKST
KSVLLVTDRRVIYANKGDIFGHWDAEWSHTWSDLKEKPKRSAKGVEFLLKDDKKKKFPFS
LGGSAKKIEVHIPDPKRAEWLVGKISEAMEIRH
NT seq
9822 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgaatctcttgtggcggacttgattaacaaatatctgggcgacttcgtggaa
aaccttgacaggtcgcaactgaaaatcgggatatggggaggcgatgttgtgctccagaac
ttggatctaaaggaaagtgcactggatgatttggatcttccagtgaagataaaggcgggc
catatcggaaaattgacattgaagattccttggaagaatctttacactgaatcagtggtt
gcctctatagatggactctatgccttggctgtgccaaatgttgccatcaagtataatgct
gagaaggaggagaaggccaagcaagaatccaaacagaggaaactgctgcagattgaagaa
gccaagaaagctgccacagataaaggaaaagagaaggagccaaagaaggactcctttgct
gagaaaatggctgcccagatcatcaaaaacctacagatacagatcaggaacatccatgtc
cgctacgaggacgcctacaccgatcccaagcaccccttctccatcggagtcagtctagct
gaactcttgtttcagacgacagatgaaaactggaaaccatgcgtggtaaaggaagccgtg
aaccagatttttaagctggtaaagttggattctcttgctgtttactggaacagcagttct
gaacagtacgcctccctcagcaacgaacggctgctggagagacttgggaaagaaattgca
ggacaagacaaaacgtcggcctaccagttcttgataaagccgatttcctccgtggctcac
ctcaagctgaacatgaagccagaactgaacaactttactctcccgaaggccttcctgacg
gtcgtgtttgatgagataggcattggactgtccaaacttcagtacaatgatgtcctaaat
atgttggagtcttttgagagaatgtacctgatgagtgtgtatagaaaataccggcctgac
gtcccactacataaacacgccaagacttggtggcattttgcaagggacagcgtattagag
gaaaaagttcgtcgaaggcgtcaaatgttttcctggggtcatataattcaccatcgaaca
gttatgaagaaatacagggacgcttacaccaagaagctttcaaatcccaagaaagtgccc
caagacgtgcagaaaggcattgaggagtatgagaaagttttggacgtgttttcaattact
ctgatgagatctcaggcagaagttgaggctgcaaagcttggggccaagaaagccgaggag
aagtcggggggatggtttggaggatttttcgggggcagcaagaagaaaaaggcgggaaaa
gaggagcaagatatcaaggaacaatttgaaaaagaattcagtgaaaaagagaaagccaag
ctgtatgaagccattggatatcaggagaatgaggtggaccccgctctcccaagagaattt
gtagcagtgaggcttgttaccaaattaagcacgctgtctttgaccttgactgatgaaacc
aaaaaagagcctcaaattctgaagctgcagctgaaagatgtgtatgctagtgttggacag
agacctgcagagagtgcaatacaagttgaagggaagattgaccgcctacaagtggtcggt
tcaccccaagatggttccactcctaagatggtcatgtctcagaatcaggagaaggacaag
gtgtacgccctcctgaactttaaccttgagacaaaccctctggacaagaaatgtgacacc
agggtcattgtggagtcgaggccactacagatagtgtacgatgcgatttctatcaacaat
atggctgacttcttcaaacctccaaaggaagtttatttgaaacagttatcgagggctgcc
atggctaagtttgaagacatcaaggaacagtctgccactggactgaagcacgccatagag
cagcataaatacaccgacatacgtgtcgacctgaaaccgtcgtatgtcatcattccacat
ggcggagtctacaaaaaaggggctgtgaatatgcttattcttgacctaggtaacctcaag
gtcaacagtgaaaagaacaaagtgggcggagatgacaagtccaaactatggagcaattca
aggaaaattctgtatccaaagatggctatggctgttgaggaagtgatgtccagagcttat
gacaatttcaagatcaagttagacagagttcaactcctttatgcaaaaccaggagaggac
tggaattctgccagactggcagggacttcccctcagcatgtccttctacccatctctatc
aacctccttctacagaagagcatgtttgacaatgaccgacgattggccaagatgaagatg
tctggggatctcccgttactgagcctgagcctgtctgacctgcgtctacaggaaatcctc
cagctggcccagagtatccccctcccggaggccggggacgaggatcaagaactggaagat
atggatgttttctctgatgcccttgatattcccctggatgtcaatgagaatcggatcatg
aagaaagtggtcaacgtttcggctgaaatggctgagcaggaaggtgaatctggtccaccc
cgcccacaagatgtagtgaacagaactattttagagatgaagtttgaaataaaagaggtg
tctgtctgcttgcaagaacacacagaggatggggatattccgatgattaaactggttctc
acaacaatgggaaccaatgtaaccaccaggaaatttgatatggaggcagaggcctactta
gggggaatctacttgcagaatctcaagttcaaagccacagaaagtttgaatcaacaactt
gattctttgacatcatcagtgcttgagggcggacctctgattaacttgattaacacgcct
actaatgaggagacacgtctactgaccttcaccttccacaaggctgatccagagggacct
gagtttgaatcgacgtttgagaacacggagcagaagatcggtgtaacatttacctccctt
gaagtactgcttcaccaggaggcactgcttagtgtgatgaagtttgcagctcaactgcag
aagagtttgcaggttgaagaatctccgaccaaggaagcaaagaccaacgcagatgcccag
aaaaagaaagaggaacaatcaaagaccgcaaaagataaacaggctgggtcaaaggggtca
cagaaaaaagggaaagttaaggatacagagaggataaacctccgtgtgacggctgagctg
gagggatttggagtcgcagtgtgtacaaataacaccgtcataacaaatgccaggatcaat
ggtatatcagcaggtgtagtgatacaggacagcaagactgttgtaacgtcagaactaagg
gaggtcactgtgtatgactccaatacaaaaacaaagtatccgaagattgtagaaattaag
ggtgatgctgtgttgaagctgaacctgacgatttacaataatgcgacagagggtgataaa
tactccgacatgtcatgtgtcgacacgagcgtggatgtccagcttggatgtattagagga
gtgtttctgatgagatttgtcagcgatttactggaatacctgaatggcttccaagtagaa
gagctagaaagtcagattgaggccgccaaggggaaagtacgcgaggcgtccgaggccgtg
acagagagtgcaaaggtcgccatggcccagttagcagagaaatcaccacgtgtctcaatc
aaggtctccatgagcgccccagttatcctagttcctcagcgttccgattccttgaatgtc
ttaatggtggactttggacatcttcacgtcagtaattcattcagtcctttcaagacagac
gccaaaattcctgctgttctggacgcaatgaagattgatctgaagtcactgaaagttgct
cgagcggagttgagcacagagaaggaagtggtgggacagtgcctagttttagaaccggta
tcgcttaacctgtctgttaccaggaacctggcgtttggatggtacaaggaaatccctgcc
gtggatatcggtggtcagctggagagcatagaggcgaccatgagtcaaggtgactacaaa
gtcattatgaccttgctcagtgacaacttgtctgaaggtcagaagtctgacacagttgct
ggatcatcaaaggtcaaggacacagaaatgaccccggcccaaggtcaaaccgttgataca
gagaaaaccaccacagctggtgcccctgctataactttgacccctccggagcagtcggat
acatataagctccacactcagctcaagttccagttccagatcaactctctgtcagccaca
ctgtactcaggggaaagtacactgacaacagatggtcagaattctcgatcagctgatcag
gccctcggtcagttcatgattgaggtcgtcggggtcaaaggtgagatgaagagtgatggc
tccttgacaaccagtgtcattctgaaggacacagtggtagatgacaagaggaagcagaaa
caggaagcgggcataaagagctctcacccacccatcaggatgatagagagagtgacctca
ggagggaagaagaatgatatgatagatgtacagttcactcaggatccctcccagaataaa
gatgtgaatgtgaaggtttgcagtattcgggtggtggtctgtctggatttcttgatgccc
ctcgctgacttcttcaccagtggactcccagactccaaacctgccccgcccactacagga
aacgcccactccaaagtggccacaccatccaaacctccgccccctcctccccctacaagt
gagatgtcagtaactgtcagcatggagacaccagagatcatcctgatagaggaccagatg
gaccccgcctccaactcactcctactcagtatgggggtggagttcagaatgagggtgacg
ccggaaacccaggatatgtccgccagtgtcaacagtctacagattgcctcggccatattt
aatgagagagagaaacgcagggctcagatcctgaatccctgtgatatatccttctacagc
aagacgccgcaagggaaatccccccacatggacatctccacatctgatctcatactcaat
atttcaccccgaacaataagaacgatcactctcattacagcaaatctatccaaacaggaa
gaatcagaaaatgacaaggaaaagcagaaagttccggcagatttgtggaatacaaaaaaa
ctctcggagcggaaattctggttcctgaaggatccgtcagcggaggaattaccagacatt
gatatgttctctcccgatatcacattagacgagattgagcgcggagagcaaggcccctct
gaaatgctgataataaaggtccccaacatcgtggtgaagctggagggaggggtggggaag
cgtactgtacccctgctcattgctgagacctcgtttgacgcccaggtcagggactggagt
tctaagcttgaagtggagagtaacatgcggctggaggtggcgttctacaatgagaagttg
tcagtctgggagtcccttgtggaaccagtcgtagagaacgggaaaatgaagaagtgggat
ctgggactacaggtaacgaagaatgatgaactagccccggaggatgatgaagaggatgaa
gactccaagaacattgtgttacccccgcccaaaatgtcaatcaacgtccgctccaacgat
ccaatggaagtgactgttacaaagacttgtctggaggtcctcaacaacttggctaaggca
tttggagatgcctacagacttgttgcgccagcagaagaggcagggaagatcctgtcacct
tacgtcatctacaacaacacaggactacctgttgttctcaaactggacaatgcttttgag
atgcctcctgaagtgaaaaatggcaaggtgaccctggaaacagatcaatcacttcctctt
tatggacggcaaaaggctgtactgaaacgacaggcatcggtcatcaaagccacgcaggag
ggcgacgagaaaaagttcatctttcagattgagcaatttggagctacgcgagaggtgaca
ataaaacgttctgagagacgactgtacccagtcaaccataagacgtatccaggcgatacg
tgggccgtagtctgtagtattgaggctcccattggtcagaagattcttcatcttcgctcc
attgtacagatgaagaaccacctccctaatgctgtggagctgttttcccggcacggacag
gatgtgaagtcgtgcggggtcattgagcccggagagaagtttcacgtccccctgtctgac
gtctacaccccggaaggttacttcctcctgaaacctaaggacagtgggtgtgaaatgtcg
cagaccccattctcttggagaggtgcagagaactctcccaaagtgtacctctcctgtaaa
ttcaaggatggctccgattatgtcatctgtgtgaggtctgaggtgattaacgtctacttt
gatgagacggagaaactgtcggccaagacttacctgttccatctgtctcccaccatcgtg
ttccacaacctgctgaatattcccgttaccttcctcctagagggaatggcatcggaggtg
tccctaggtaaaggagagaacaaaccactgcttcacgccatgccagggcattcccacata
gaagtcaagatcccagcgtatcaagatctggagtggcatggaacacagcttctctccacg
gagtttccggaactatccatgtggaccttcagtgccttattcaaaggaccccagaaaatt
tccttgattttaggactgcactgtaaggaaaatgagggatgtctagacatgtctatttat
agtccgtactggatggtcaacaaaactggaatgactctatattacaagggcagtgattct
gatgatgttatagaacactcccccgatcatcaggaggtggcctttttctcctttaaacca
aagacctgccttggtggaaagaaaaaggagacaaaaccgcagaaagaaaattccaaagag
aaagtgaaggaatggcggcaagttggtaaagcgtcgctaaggatagcggatgctgattgg
tcagacaagttctccttggatacagtgggaagttctggaaccatccaaagcaaaaccaaa
tccagggtgtatgaggcaggggtaaaaattcgcctttcaagctctgggctgaccaagatc
tgtacgtttacacctctatacatgctgctgaatacatcagaggtcaaactgctgtgtgct
gaaaccacgaaacaagatgaatggactcaaattccgcccaaatcatgtctgcccttttgg
ccattgcattctgggaaggagatgacaatggtggccaaagttgacgggtctgcgtatagt
acaacaccgttctactttaacaaaccacacactactctgatgagagtggatgatgaggtt
ggaggaataaatgtggactgtcaggtgacagaggctgccacggtaacatccttgacaaca
tataaaccaggcatggctactgtccttatgatcaacagtacagaccgggcagtcgtcaag
tacaaccagtgtggtgagaagtcggcacacgttgtgaatcccatggagtgtgtactgtac
acctgggagaatgccataggaaagagggagctagaatggagctctggagaagtgaaatct
cagaaaaccagccttatccaggacggtacagacagttttttcctggattcggacaccaag
attttctgggtctccttcctggacggactacagagagtgctgttgtttactgaggacctc
gccgtggccattaatgctcaggaggcaggagagttggagagaattgagcaggagatcaac
ctctctctccacagtatgggtgtatccctggtcaatgacacaacacagactgaagttgct
tacctcggcatcacaagttctggagtaatttgggaagagaagaaaaagaggtataaagca
ctgaatggaaagacaacaggattactggaggcagcctatcagaagtatgtcatggagata
gaattaggtcaccgtccaccagagaaaattgccctggacaataaaatggaggtgaatttc
caggagatgaggatgataaagccaaacaacagggggattcgaagatctttccaggatggg
gtgtggatccagtataaaacatcaccccatcaacttcaggtccatgccaagatcaatcgc
ctacagctggacaaccagacctacatctatgtgttccccacggtcttggctcccatccct
ccccccaaatcagtcgcctcagacagtgttccaaagcctttcgctgaggtcagcatattg
tcacggaaacatgaacacagcaacatgcaacagtttaaatatttcaaggtgttggtccaa
gaaatgtcgttaaaggtggaccagggcttcctgaacaacataatagacttcttcacctcc
agtcaacaggtgtcacgtgatcaggagaaggagatgctggaggcagacctgaagacagtg
tatacggagttacttgacgaggccgggctttcacttgccgaggaacagaagaacttcttt
gactacctccacttctcacctatcaagatccacctgagtttctccctgcaaggaggggga
ggaggagatgggaaggcggtccatctccatgccaacattatcaatgtcttcctgcagagt
gtcggggtggtgctgactgatgtacaagacgtggtgttcaagcttggatattttgagaga
aagaacactttctacaaccagtcgcagctgacttcagaaatgggtcgtcattatgctggc
caagcggtcaaacagctctatgtcctggtacttgggcttgacgtacttgggaatccgttt
ggacttttgcgtggaatggctgagggaatggaagatctattctatgagccgtatcaggga
gctattcagggacctgaagagtttgctgagggtctggcccttggggtcagaagtctccta
ggtcatgctgtaggtggcgctgcaggagcagtttctcgaatcaccggtacgattggcaag
ggactggcagcactgacatttgacgatgagtatcagaagaagaggagagagggactgaac
aagaaaccagccaacatcggagaggggtttgccaggggagggaaaggccttgtcatggga
gtttttgacggagttacaggaattgtccgaaaaccaatagagggcgctcagaaggaaggt
gtggaaggtttcttcaaagggatcggtaagggcttggttggcgtggtaaccagaccgacc
agcggcgtgatagattttgccagcagctccttcgaaggaatcaagagaattgcagaactg
tcagatgatgtaggaagactacgtccccctagacgatttcactcagacaaaataattcgt
ccgtacagtctcgtcgaggcctcaggatacgccattttacaggaaacagagaaggggaag
tttgctggaacagatgaatacatggctcattctgtgatcattggagacagcaagtccacc
aagagtgttctactagttaccgacagacgagttatctatgccaacaaaggtgacatcttt
ggacactgggatgcagagtggtcacacacatggagtgatttaaaagaaaaaccaaagaga
tctgccaaaggagtggagttcctgttaaaggatgacaaaaagaaaaagttccctttttcc
ctgggaggatctgccaaaaagatcgaagttcatatccctgatcccaagagagcagagtgg
ctggtcgggaaaatatcagaagcaatggaaataagacactga
DBGET
integrated database retrieval system
