Magallana angulata (Portugese oyster): 128171205
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Entry
128171205 CDS
T09348
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128171205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128171205
03400 DNA repair and recombination proteins [BR:
canu03400
]
128171205
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128171205
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128171205
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128171205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Helicase_C_2
DUF7790
Mre11_C
Helicase_C_4
Motif
Other DBs
NCBI-GeneID:
128171205
NCBI-ProteinID:
XP_052692903
LinkDB
All DBs
Position
2:complement(19205216..19207565)
Genome browser
AA seq
539 aa
AA seq
DB search
MTYSTMAASTEYQEIICKRFKIQSLTDKQSKTISAIEQAKDVFLCTRTGSGKSLTYEYFP
VLHPGKCVVVVAPLLSVMQEQCYKLNNLGFKATFIGKDFRESGALEQGAFDFVFGSPESF
INNSNWREMLKSEIYQSKLQLIAVDEAHTVTQWGEGDKDEEPFREAFANIGELRSICPKA
TLLALTATSGPSQRRRIMKMLCFRSNSDIILDSPDRENIKITSVCIPNSDNLEKVFKWLI
DSVRLNKVKTERHVVFCESISDVSKIYTTFVKHFGNDCELFEMFHSKTDEKVKEIISKDM
SKDGNIRVLICTNAAGMGVNFHNVHHVVHYKLPRKLDTFVQQMGRAGRDGHLSDELIMYK
SNKNHLKRVESELVRLAKDDSKCRHELLCEAYLSPNKKILPSHDCCEVCEKSCDCKSDLC
PRKHDYFKTENEDSASDSEDEMTRSVSDKEKKLIHDKLVFYKSQMSIDCIIDFEVVHGLT
NEVLNKLVQSSDSIFTPDDVMKKFPIWSTDTATEVSKIISEVVGDSDMYNFAGDTEESD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacgtattcaacaatggcggcctccacagaatatcaagaaataatttgcaaacgattt
aaaatacagtctttgacagataaacaatcaaaaaccatcagtgcgattgaacaagcaaaa
gatgtgtttctatgtaccagaacaggtagtggaaagtcgttaacctacgagtactttcca
gtgctacatccaggaaaatgcgttgttgtcgtggcccccttgttaagtgtcatgcaggaa
caatgttataaactcaacaatctgggttttaaagctacttttatcggtaaagactttcga
gaatccggtgcattagaacaaggtgcgtttgattttgtgtttggcagtccagagtccttc
attaataacagcaattggagagagatgttgaagtccgaaatttaccaaagtaaattacag
ttgattgctgttgatgaagcccatactgttacacaatggggtgaaggtgataaagatgaa
gagccctttcgagaggcattcgccaacataggggagttacggtcaatctgtccaaaggca
actctacttgcgttaactgcaacatctggacctagtcagcgtagaagaataatgaaaatg
ttatgctttcgttcaaattctgatatcatattagattcaccagatcgggagaacattaaa
atcacttcagtgtgtattcctaattctgacaatttagaaaaagttttcaaatggctaatt
gacagtgtgaggttaaacaaagttaaaactgagagacatgtagttttttgtgaaagtatt
tctgatgtatcaaaaatctacacaacctttgtgaaacattttggaaatgactgtgaatta
tttgaaatgtttcatagcaagactgatgagaaagtaaaagaaattatttctaaagacatg
agtaaagatggcaatatcagggttttgatctgtacaaatgctgcaggtatgggcgttaat
tttcacaatgtgcatcatgttgtccattataaactacctagaaaattagatacatttgtg
cagcagatgggaagagcagggagggatggacatttatctgatgaactgataatgtataaa
agtaacaaaaatcaccttaaaagggttgaaagcgagcttgttcgattggctaaagatgat
agtaaatgtagacatgaactcctatgtgaagcatatctttcacctaataaaaaaatatta
ccatctcatgactgttgtgaagtttgtgaaaaaagttgtgattgtaaaagtgatctgtgt
cctcgaaaacatgattattttaaaacagaaaatgaagatagtgcttcagattctgaagat
gaaatgaccagatctgttagcgataaagaaaaaaaattaatacatgataaactggtgttt
tataaatcacaaatgtccatagattgtataatagattttgaagtagtgcacggactaaca
aatgaagttctcaacaaattggtgcaaagcagcgattcaatatttacacctgatgatgtt
atgaaaaagtttccaatatggtcaactgatacagctactgaagtcagtaaaattatctct
gaagttgttggcgactctgatatgtataattttgcaggagacactgaagagtcagattga
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