Magallana angulata (Portugese oyster): 128171552
Help
Entry
128171552 CDS
T09348
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128171552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128171552
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128171552
REST complex
128171552
Heterochromatin formation proteins
Other heterochromatin formation proteins
128171552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
CPDase
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
128171552
NCBI-ProteinID:
XP_052693294
LinkDB
All DBs
Position
2:complement(54961614..54980093)
Genome browser
AA seq
1323 aa
AA seq
DB search
MNTQPRRVPQGESQYPRVIAPSAQRFDIAGSTAAENLSQIQFPMHNFPTTQSHVHSSGMH
HQPNPTLPGHHGAPAGQGGSQPPIQQAHAQGPPPQAHSAASQGQQQQFQRLKVEDALSYL
DQVKLQFGNQPQVYNDFLDIMKEFKSQTIDTPGVINRVSNLFKGHPDLIVGFNTFLPPGY
KIEVQANEISVHQPGQQTLCIPTNAPVMLPSATPMPGHKLDMFSMQPKTTPPPAHMATPP
THGSSHHSYHQSPHRGAAADQIGGTTPQSHQPQPQQPQAGQPVEFNHAINYVNKIKNRFQ
GQPEIYKAFLEILHTYQKEQRNLKEGIVSPACKPLTEAEVYSQVAKLFQNQEDLLAEFGQ
FLPDANGSAYGGYLNMLQGDSSLGVRNDHSSTVKKPSLSNKSQMGKSGNQHRRPSGGPQP
PQKVSRVKGSQMSGQKQRTGTLKDISLAEAGRYGTLNEFAFFDKVRKFLKHPEVYENFLR
CLVLFNQEVISRTELVQLVQTFLQRSPELYKWFKDFLGYKESGGTTEAVPQGALGKERVS
GELAMEIDYATCKRYGASYRALPKSYPQPKCSGRSPLCREVLNDTWVSFPSWSEDSTFVT
SRKTQYEEHIYRCEDERFELDVVIETNLATIRCLEAVQKKMGRMSSEEAAKFRLDNALGG
SSDVLQRKAIQRIYGDKAPDIIDGLKKNPVVAVPLVLRRLKAKEEEWREAQRDFNKYWRE
QNEKYYLKSLDHQGINFKQNDIKAIRSKALLNEIETIYDERSEQDTETAEAFNPHLSYVY
KDRSVIEDASSLILHHMKRQAAIHKDDKHKIKLLLRQLIPDLFFSPRQEMSDDEDEDDME
TDEAVDKETTKSEEKRDSERDRSSSSGKNGKDSEAGTPKIKEEKMETTEIKQEDEESKSA
DSAIINGSQDENTNDGDMEDDDIYSLFFVNNNWYLFFRLHQILCERLYKIYTYSVKIAAE
EAQCRKDRKESTAIALRLKAPSEIEPEEYYPYFLEMVKSLLDGNLESTQYEDQLREMYGI
HAYIAFTMEKLVQNLVRQMQHIVQDEVCLRITALHQEERKNGATGGRVATVHQRTVKETA
YHKRAEQCLSEENCFRIVIFKKECRLTFELMDTEHEQSDDPIEVERWSEYVEKYVSKDDT
VSDDLKEHLNRKPVFLPRNVRQWRRHQKNQKSRSDTETEEILGSPKQSTEEMDILDNTEC
KFNVNSFKIVYVVNSEYYLYKRTALTKARESHKRVSLKLHDKFSSWIEGWREENLSEDQR
SNCEDWLMGHGEDVVACTTTKEPRGDQDSTPYFSYNKYHVEYEYETKSEAGEPAEIPKEA
ATS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcagcccagacgcgttccccaaggggagagtcagtatcccagagttattgcc
ccttcagctcagcgctttgacattgcaggcagcacagcagctgaaaatctctcccagatt
cagtttcccatgcacaattttccgactacacagtcgcatgttcattcatccgggatgcat
caccagccaaacccaactttaccgggtcaccatggagccccagcagggcagggtggctcc
cagccccccatccagcaggcccatgcccagggaccgcccccacaggcccactcagcagca
tcccagggacagcagcagcagtttcagaggttaaaggtcgaggacgcgctgtcctacctg
gaccaggtcaagctacagtttggaaaccagccacaggtctacaacgacttcctggacatc
atgaaggagttcaagtctcaaacaatcgacacccctggagtgattaatcgagtgtccaac
ctgttcaaaggacacccagacctgattgtgggcttcaacacgttcctgcccccgggctac
aagatcgaggtccaggccaatgagatcagtgtacaccagcccgggcagcagaccttgtgt
atccctaccaatgcccccgtaatgctgccctctgccacgccaatgccgggacacaagttg
gacatgttctccatgcagccgaagacgacacctccccctgcccacatggcgaccccgccc
actcacggctcctcccaccactcctatcaccagtccccccaccgcggggccgcggccgat
cagatagggggaaccaccccccagagccaccagccccagcctcagcagccacaggctggt
caaccggtggagttcaaccacgccatcaactatgtcaacaagatcaagaatcggttccag
ggtcagccagagatctacaaggcgtttctggagatactgcacacctatcagaaggaacag
cgcaacctgaaggaggggattgtctcccctgcgtgtaagccgctgacggaggcggaggtt
tactcccaagtggccaagctgttccagaaccaggaggacctgctggccgagtttggacag
ttcctgcccgacgccaacggatcagcctatggcggttatctgaacatgttgcagggtgac
agttccctgggggtcaggaatgaccactcatccactgtcaaaaagccctccctgagcaac
aagagccagatgggcaagagcgggaaccagcacagacgcccctctggtgggccccaacca
ccccagaaggtgagcagagttaaagggtcacagatgagcggtcaaaaacagagaacagga
actttgaaagacatctcattggcagaggctgggcggtatggaactctgaacgagtttgcc
ttctttgacaaagtgaggaagttcctgaagcacccagaggtctacgagaacttcctgcgt
tgtctggttctcttcaaccaggaagtcatttcccgtactgaactggttcagctggtccag
acattcttacagcggtcccccgagttgtacaagtggttcaaagatttcctggggtacaaa
gagtcaggaggcaccaccgaggcggtcccccagggggcgctcggcaaggagagggtcagc
ggggagctggccatggaaatagactatgctacctgcaagcgctatggagcgagttacaga
gcactgccaaagtcctacccccagcccaagtgttcaggccgcagtcccctgtgtagggag
gtactaaacgatacctgggtgtccttcccctcgtggtcagaagactctacctttgtcaca
tcgcggaaaacacagtacgaggaacacatctaccgctgtgaagacgagcggttcgagctt
gatgttgtcatagaaacaaatctggccaccattcgttgcttggaggctgtgcagaagaaa
atgggacgcatgtcctcagaggaagccgccaagttccggctggacaacgccctagggggg
tcatccgacgtcctgcagaggaaggccatacaaaggatatatggcgacaaagccccggac
attatcgacggactgaagaagaatccagtcgtggcagtacccttagtgctgaggaggtta
aaggccaaagaggaggagtggcgcgaggcccagcgggacttcaacaagtactggcgcgag
cagaatgagaagtactatctgaagtcgctggaccaccagggcatcaacttcaaacagaac
gacataaaggccatccgatccaaggcgctcctcaacgagatcgagaccatctacgacgag
aggtctgaacaggacacagagaccgcggaagccttcaaccctcacctaagttacgtgtac
aaggatcggtcagtcatagaggacgcctcctccctcatactgcaccacatgaagcgacag
gccgctatccacaaagatgacaaacacaagatcaagctgttgctacggcaactaattcct
gacctattcttttcacctcggcaggaaatgagcgacgatgaagatgaagatgacatggaa
acagatgaagcagttgacaaggaaacaacaaaatcagaagaaaagagagactcggagagg
gacagatcatcaagttcagggaaaaatgggaaggacagtgaagcaggcaccccgaaaatc
aaagaggagaagatggagacaacggaaatcaaacaggaagacgaggagagtaaatcggcg
gactcagccatcattaacggcagccaggacgaaaacacaaacgacggggatatggaggat
gacgacatctactccctgttctttgtcaacaacaactggtacctgttcttccgcctgcac
cagatcctttgcgagcgcctgtacaagatctacacctactccgtcaaaatcgctgcggag
gaggcgcagtgccgcaaggacaggaaggagtcgaccgccatcgctctacgcctcaaagct
ccaagtgagatagagccggaggagtactacccgtacttcctggagatggtgaagagtcta
ctggacggtaacctggagtccacgcagtacgaggaccagctgcgtgagatgtacggcatc
cacgcctacatcgccttcaccatggagaaactcgtacagaacctggtcagacagatgcag
cacattgtgcaggacgaggtgtgtctgaggatcaccgcgctgcaccaggaggagaggaag
aatggtgccactgggggacgggtcgccactgtacaccagcggaccgtcaaggaaactgcc
taccacaagagggccgaacagtgtctcagtgaggagaactgcttcagaatcgtcattttc
aagaaggagtgcaggttgacctttgaactgatggacactgagcatgagcagtcggacgac
ccgatagaggtggagcgctggtccgagtacgtggagaagtacgtctccaaggacgacacc
gtctccgacgacctgaaggaacacctcaaccgcaaacctgtcttcttacccaggaatgtc
cgacagtggcgacgtcaccagaagaaccagaaatcccggtcggacacagagacagaggaa
atcctgggctctcccaaacaatcgacggaggagatggacatcctggataacacggaatgt
aaattcaacgtcaactcattcaaaatcgtctacgtggtcaacagcgagtactacctgtac
aagagaaccgctctcaccaaagccagagagtcccacaagagggtctcgctgaagctccat
gacaagttctcgtcatggatcgagggctggcgtgaggagaacctaagcgaggaccagcgg
tccaactgtgaggactggctaatgggtcacggcgaggatgtggtggcatgtactaccacc
aaggagccgcgcggcgaccaggactccacgccctacttttcctacaacaagtaccatgtc
gagtacgagtatgagaccaagagcgaggcaggggaaccagctgagatacccaaagaggcg
gccaccagttaa
DBGET
integrated database retrieval system
