Magallana angulata (Portugese oyster): 128172080
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Entry
128172080 CDS
T09348
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128172080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128172080
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128172080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
CEP63
DUF1664
Nup49_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
128172080
NCBI-ProteinID:
XP_052693808
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All DBs
Position
2:complement(49062224..49083875)
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AA seq
611 aa
AA seq
DB search
MFGGKPNPTPGFTFGATPSAGSTPATGGGFSFGTPSTQATGNVSFGAAVGQTPAAGPTSS
FSFGATPTASTGGFKLGGTTPSFPSTQSSTAAPTTGFALGTSTASTQSGGFKIGATTLPP
AFPGTTSTAPGTTATVAPAMGFAMPIPSSTATGGGGMGIGMGLGGAVKPTLTSTTSTLGG
LFNTQTPAAKPAGILGATTATGSVFGTPATTSQTVGLGGVDPKTSTTAAGGSAADPKAGD
GKTLKKSQVPPEIVKTVEDFKTYIKEEKTVQEGISRMSCKPMYKVQEDVASLKQLLSIVS
NGLQRNACAVEKLKKEMTQELKNAEMAQRTKDIPAGLQYENTAPTEYFQRLVENFETQML
SYRQQIETLEGHLHSISQPSILSPEELVELLRKLHETFIALAAQLHQVHEAVKTQKEHYL
NYRKIFLHDTKNIFEREKKAVKPKVLPEHFGPSPFSGLSNAAAVAMASALTKSQQPPAAA
PPVAGLGTLGQTTGGFGSTGLFGATTTTAPAFGFGLGSSSTTAPPPAFGGFGSTAATTTT
TSSGFTGLNTATVRPLGFGTPAPTTTTTPSLFGTPQTVQTPAFGTPQGFPSAGGEQPFQL
NKPPGSKRNKR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggaaaaccgaacccaactccagggttcacctttggggccacgcccagtgca
ggctctacaccagcaacaggcgggggattttcttttggaacaccctctacgcaggcgaca
ggaaatgtgtcattcggtgccgccgtaggacaaactccagctgctggaccgacttcttca
ttcagctttggtgccacgcctactgcctccacaggtggctttaaattgggaggcaccaca
ccgtcctttccctccacacagtcctctacagcagcccctaccacaggttttgcattagga
actagcacagcatcaacacaaagtggaggcttcaaaataggagccaccaccttaccccca
gcctttccaggaaccaccagcactgcccctgggacgacagccactgtggctccagcgatg
gggtttgccatgcccatccccagcagcactgctactggcgggggagggatggggattggg
atggggctcgggggagcagttaaacccaccctgaccagcaccacttcaaccttgggagga
ctgttcaacacacagacaccagccgccaaacctgcaggaatactgggggccacgacagcc
acaggaagcgtgtttgggacccccgccaccacctcacagactgtgggactcgggggagtg
gatccaaaaacctccaccaccgccgctggaggttctgctgccgatcccaaagcaggagat
ggaaaaactctaaagaaaagccaggttccaccagaaattgtcaaaactgtggaggatttc
aagacctacattaaggaggagaagactgtccaggaggggatttcccgcatgtcgtgtaag
cccatgtacaaagtacaggaggacgtggcctccctcaaacaacttctgtccatcgtctcc
aacggtctacagaggaatgcctgtgcggtggagaaactcaagaaagagatgacccaggaa
ttgaaaaatgcagagatggcccagagaacaaaggacattcctgcggggctgcagtatgag
aacactgcacccacagagtatttccagcgactggtggagaatttcgagacccagatgttg
tcatatcgacaacaaatcgagacccttgaaggtcaccttcactccatcagtcagcccagc
atcctgtccccagaggaactggtggagctgctcagaaagctacatgagacgttcattgcc
ctggccgcccagttacatcaggtccacgaggcagttaagacccagaaagaacactaccta
aactacaggaagattttcctgcatgacaccaaaaacatcttcgaacgagagaagaaagcg
gtcaaacccaaggtcctcccggaacattttggtcccagtccgttctccggactttccaat
gcggctgcggttgccatggcgtcggccctgaccaaatcccagcagccccctgcagcggca
cccccagtggcgggcctagggaccctggggcagaccacgggaggattcgggtcgactggg
ttatttggagccacgacgactacagctcccgcatttggatttggtttaggaagcagttct
accacagcgccgcccccagcattcggcggatttggttctaccgccgccaccaccaccacc
acaagttcaggctttactggcttgaacactgcaacagttcgcccattaggttttgggacc
cctgctccaacaaccactaccaccccatcactgttcggaacacctcagacagttcagaca
ccggcatttggaacacctcagggttttccctcagcgggaggcgaacaaccttttcagtta
aacaaaccccctgggagtaagagaaataaaagatga
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