Magallana angulata (Portugese oyster): 128172253
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Entry
128172253 CDS
T09348
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128172253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
canu04515
]
128172253
Cell adhesion molecules [BR:
canu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
128172253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Neogenin_C
ig
Pur_ac_phosph_N
V-set
Ig_DSCAM-DSCAML_C
Interfer-bind
C2-set_2
NDNF
Ig_6
TM_ErbB1
Mid2
EphA2_TM
Protocadherin
PD40
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128172253
NCBI-ProteinID:
XP_052694008
LinkDB
All DBs
Position
2:16280098..16313589
Genome browser
AA seq
1485 aa
AA seq
DB search
MDLTERSKRTVLSCVVTFAVVCLKCVHATTSFTELTFLEEPSNLVVSRGNAATLHCSVQS
EAGMPNVIWMKDGKPLGLDDQNILWPNGSLHITNVDGSNRGLYQCMATLPQTGAIISRFA
SLHTAYLSRNFIREPQDLTIYLQEVAMFECEGDGLPAPNVTWYKDNSLLRDFKPNILVYP
DGVLEINPVEFSDFGTYYCQVENTERARSSRLAKLEQNGNTDSFDDGTAPWFVATPRDTS
IPEGSSTILFCGANGFDTLRKKPEITWLKDGETIIFNSTQGRLKLKGAGSLQIFNVQPFD
AGTYSCRSNNLEDSIDAEATLTVLVRPHFETKPQSVRAYEKTEAIFNCKLKGSPAPEVRW
TKDGLPLQESNYIIENEDHLRIMGLVTSDSGYYQCHGSNELGSIQAIAQLVVLPNTLATL
TDRYSYGGQRSPPSKPTGLAAAIVSKRFITLRWDKDDDGGTTGYTVFWREQGSLRERMLN
TTQPEATLQRLNPDSRYQIQVRAFNSVQYSWSYASIEVDTEKDVAVPSPPVNIRVTPQSP
ESILVTWDPPLQPKGQILKYLLSYEDSHGSPKQIEVLDTRKLLTGLMAFRTYTLRVVAVN
ENGEGMSTREMTTKTYSDKPSEPPQNATLETASSTSLIVRWEPPPREHQNGKITGYKIRY
KMKGASRNGATVTTDGNRRLYALTNLEKMTEYQVRISALTVNGSGPLTPKLKATTYEDDL
DESRVPDAPRTVTVTPHATSIRVSWTTPPPEKKIVVRGYVLGWGKGVPDSEKKVLGPDTQ
IYTIENLIPSSEYVITVRAMNNKGEGLTRYTTAITTKESVEERLIPLFPPVGLKTMVLSS
STIVLTWTDTSIGPSQKLLDNRYYTVRYRLATETENDNNRYWYLNSTDLNAHIDHLRPNT
KYEFDVKITKGRSVSPWSMKESNKTMEDVPATAPVDLTPVPKKNDPRAVIMNWQPPAKPN
GQITGYLVFYTTDPKQDLREWVVDGVLEGDELSATIKRLTPSTTYYFKVQARNSKGYGPL
SETVIYKTPQADGSGGGQIDPEYPRISPGGKGTMPDLSEDPKKTSVGGNGNSRDSEGRRG
SNSESGLPTGIMNIIIASVVGAAFCVIIIVIAVIYCKRRDNEQRLKRQAQQNQQSPVKGK
GQGRDLKPPDLWIHDNMEMKNIDKGQRSESTLTMSTTRRSSNDYRSMDDLPPYHEDRNEM
YYHPPSDHDERERFLPPRQPGPGIIRPKATKPLMIPVDAQPPPREPIAMVTALPNGALNP
NLDRGEPGVMSRPGFPRTQYNMQYTSGGPRVNAGDLPQPPPIQAYPIDYAYKRPIYDEDD
TSSLHSCHDDRSFSSRSIGYGQKPPDCHSLGQGQPMAVIAPGQHEFDGHRSLPRGNRPMR
SFTSPNPHNQSNLFSGVHHHSTPKHQIVKPQQSPYKKAGPPLTSAPIKPRAIPVIKPKAP
DVVLKAGVDPDIQKSESTEELSAEMANLDCLMKDLNAITQQNFEV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaccgaaagaagtaaacgaacagttttgtcctgtgttgttacttttgcagtc
gtgtgtttaaagtgtgtacatgcaacgaccagttttaccgagctcacattcctagaggag
cccagcaacctggtggtttccaggggcaacgccgccacgcttcactgctccgtccaatca
gaagcaggaatgcccaacgtcatttggatgaaggacggaaaacccctgggtcttgacgat
caaaatattctttggccaaacggatctcttcacatcaccaatgtcgatggttcgaatcgg
ggcctgtatcagtgcatggccactctcccccagactggggccatcatcagccgcttcgcc
agcctacacacagcttatctctctagaaacttcatccgcgaacctcaggacctcacgatt
tacctccaagaggtagccatgtttgaatgtgaaggtgatggactgcccgcccccaatgtc
acatggtacaaagacaacagtctgctccgagacttcaagcccaacatcctggtgtatcca
gatggagttctggaaattaaccccgtggaattctcggacttcggcacgtattactgccag
gtggaaaacacggagagagccaggagtagccggttagccaagctcgagcagaacggaaat
acagattcctttgatgacggcaccgcaccgtggtttgtggcgaccccccgagacaccagt
atcccagaaggctcttccaccatactgttctgtggggccaatggcttcgacaccctgagg
aaaaagcctgaaattacctggcttaaagatggagaaaccatcatcttcaatagcacccag
ggtcgtctcaagttgaagggggcgggcagcttgcagatattcaatgtccagccctttgat
gctgggacctactcctgtcgttccaataacctagaggactctatagacgccgaggccacc
ctcactgtgttagttcggcctcattttgagaccaaaccacagagcgtcagggcatacgag
aaaacagaggccatctttaattgtaaactcaagggttccccagcgccagaggtccgatgg
acgaaagatggactcccgctacaggagtctaattacatcatcgaaaacgaagaccacctg
aggattatgggattggtgacctctgacagtggatattatcagtgtcacggcagcaacgag
ctaggaagcatccaggcaatagctcagcttgttgtgctacctaacacactggccactctc
acagacaggtattcctatggaggacagaggagcccgccctcaaagcccactggtctagcg
gctgccattgtgtccaagcggttcatcacactccgatgggacaaagatgatgatgggggg
accacggggtacactgtattctggagggagcagggctctctcagagaacgtatgctgaat
accacacagcctgaggctacacttcagaggcttaatccagactccagatatcagatccag
gtacgggccttcaacagtgtccagtacagctggagctatgcaagcatcgaagttgacacc
gaaaaagatgtggcggtgccaagtccaccggtcaacattcgagtgacgccacagtcccca
gagtccatcctggtaacttgggacccacctctacagcccaagggacagattctgaagtat
ctcctcagctatgaggactctcatggatcacccaaacagattgaggtgttggacaccaga
aaacttctgacaggtttgatggcattccgaacctacacactccgtgttgtggctgtgaat
gaaaatggggaagggatgagcacaagggaaatgaccacaaagacgtactcagacaaaccg
tcagaaccaccacaaaacgccacgcttgaaaccgcaagttctacgtcactcattgtgcga
tgggaacctccccctcgggagcaccagaacgggaaaatcacaggctacaagatccgctac
aagatgaaaggcgcctccagaaacggagccaccgttaccacggatgggaaccgccgtctg
tacgccctcactaacctggagaagatgacagagtaccaggtgcggatctcagctctgacc
gtcaacgggagtggaccactgactcccaaactgaaggccaccacctatgaagatgatttg
gatgagtctagggtacctgatgcccctcgcacagtgactgtgacccctcatgcgacctcc
attcgagtttcgtggaccacccctcccccggagaagaagatcgtggtgcggggctacgtc
ctggggtgggggaaaggtgttccggactcggagaagaaagtccttgggcctgatacccaa
atatacacaatagagaacctcattccttcctccgagtacgtgattacagttcgcgccatg
aacaacaaaggggagggattgacccgctacaccacagcaatcaccaccaaggagtccgtg
gaggagaggctcattccactttttcccccggtgggtctgaagacgatggttttgtcctcg
tccaccattgttctgacctggaccgacacctcgattggccccagtcagaaactgctggac
aatcgttattatactgtcagatatcgtctggcaacggagacggaaaatgacaataacagg
tactggtacctgaactcgacagacctaaacgctcacattgaccacctacgtcccaacact
aagtacgagtttgacgtcaagatcacgaaggggcggagcgtaagtccatggagcatgaag
gagtccaacaaaaccatggaagatgttcctgctacagccccggtagatctgacccctgtc
cccaagaagaacgacccccgggcagtcatcatgaactggcagccccccgctaaacccaac
ggacaaatcacagggtacctagttttctacacgacggacccaaagcaggacctgcgtgag
tgggtggtagatggggtcctcgagggggatgagctgtcagcgaccatcaaacgcctcacc
ccctcaaccacatactacttcaaggtccaggcacgcaacagcaagggttacggtccgctg
tctgagaccgtcatctataaaacacctcaagcggacggaagtggtggtggccagattgat
ccggagtatccacggatcagtcccggtgggaaagggacaatgcccgatttgtccgaggac
ccgaaaaaaaccagcgtgggaggtaacggaaatagtcgagacagtgaggggagaaggggc
agtaactcagagagcggtctgcccaccggcatcatgaacattatcatcgcctctgtggtg
ggggcggcattctgtgtcatcatcatcgtcatcgctgtcatttactgtaagagaagagac
aacgaacaaaggctcaaacgccaagctcaacaaaaccagcagtctcctgtgaaaggcaaa
ggtcagggtcgtgacctaaagccccctgacctctggatccatgacaacatggagatgaag
aacattgacaaaggtcagaggagtgagagtacgctgaccatgagcaccacgcggcgaagc
tccaacgactaccgctcaatggacgacctgccaccctaccacgaggacagaaatgaaatg
tactaccatccaccctctgatcacgatgaaagagagaggttcctgcccccaagacaaccc
ggtcctgggataattcgccccaaggcaacaaaacccttaatgattccagtggatgctcaa
cctccacctagggaacccattgcaatggtgacagctttacctaatggagcgctcaacccg
aacctggatcggggagagccgggggtaatgtctcggccaggattcccccggactcagtac
aacatgcagtacacaagtgggggaccaagagtcaacgccggggatcttccccagccacca
ccaattcaagcctacccgatagattatgcatacaagcgtcccatttatgatgaagatgac
acatccagcctgcatagttgtcatgacgaccgttccttttccagtagatccattggttat
ggccagaagccccctgactgtcattccctaggtcaaggccaaccaatggccgtcattgcg
ccaggacagcacgagttcgacggccaccgcagtctgcccagaggaaaccgaccaatgaga
agcttcacatccccaaacccccataaccaatcaaatctcttctcaggggttcatcaccat
agcaccccaaaacatcagatagtcaagccccagcagtctccctataagaaggccgggcct
cctctcacctctgctccaatcaaaccccgtgccatacctgttataaagcccaaagctcca
gacgtcgtgctgaaggccggagtagatccagacatacagaagtcagaaagtactgaggaa
ctttcagcagaaatggctaatttggattgtctgatgaaagatctgaatgccataacgcag
caaaactttgaggtttag
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integrated database retrieval system
