Magallana angulata (Portugese oyster): 128172269
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Entry
128172269 CDS
T09348
Name
(RefSeq) coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128172269
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128172269
Membrane trafficking [BR:
canu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128172269
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128172269
Exosomal proteins of bladder cancer cells
128172269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
TPR_COPA_B
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
128172269
NCBI-ProteinID:
XP_052694026
LinkDB
All DBs
Position
1:4637660..4649643
Genome browser
AA seq
1229 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLTSLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
TQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTYFHHEYPWILSSSDDQTIRVW
NWQSRNCVSVLAGHSHFVMCAMFHPSEDLIVSASLDQTVRVWDISGLRKKNVSPGPGGIE
DRIKSSGQTDLFGVSDTVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDSK
AWEVDTCRGHYNNVSCCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDRFWVMS
AHPSLNMFAAGHDSGMIVFKLERERPAYAVHNNILFYVKDRYLRKLDFSTSKDNPVIQLR
GGSRNPVFSMSYNPAENAVLLCTRASNAENSTYDLYALPKTSDSQNPDAPEGKRSSGLSA
VWVARNRFAVLDRTHNIVIKNLKNEITKKVQAPNCDDIFYAGTGCLLLRDADAVTLFDVQ
QKRSLASVKISKVKFVVWSSDMSHVALISKHVIAICNRKLENLCTIHENIKLKSGAWDES
GVFVYTTSNHIKYALTNGDYGIIRTLDLPIYITRIKGNSVFCLDREVRPRVLSIDPTEFK
FKLALVNRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLALECGNI
EIALEAARALDDQACWEKLGEAALLQGNHQVVEMAYQRTKNFDKLSFLYLITGNLEKLRK
MMKIAEIRKDTSGHYQNALYLGDVGERVKILKGVGQKSLAYLTAATHGLEEEAEQLRESF
GEDEKIPELYPQAQLLQPPVPIMQQESNWPLLTMTKGFFEGAMAAGTAGTKRTGLAAAAV
DIEDGAGEGWGDDADLVLDDEGGFGGEGLDDEALVGASEEGGGWDVGDDDLELPPDLDVG
PAAAGGGEEGFFVPPTKGTSQTQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVVQFDTY
KQLFLQTFSRSRTCYQGLPSIPPLFGFPHRNWKEAGARAGMPAVGLKLNTLVQQLQVAYQ
MTTTGKFGEAIDKFRSILLSVPLLVVENKQEISEAQQLVEICREYIVGLSMEQNRKELPK
STLEEQKRICEMAAYFTHCNLQPIHMILTLRTALNLFFKLKNYKTAASFARRLLELGPKP
DVATQTRKILSACEKTPTDAHELKYDQHNPFDICAASYVPIYRGKPVVKCPLSGACYQPE
FKGQVCRVTQVTEIGKDCIGLRISPIQFR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaaatttgaaacaaaatctgcgagagttaaaggtctctcctttcacccaaag
cgaccatgggtgttgaccagtctcttcaatggagtgatacagttatgggactacaggatg
tgtacactcattgacaaatttgatgagcatgatggtcctgtgagaggaatttgttttcac
acacagcagccactgtttgtgtctggtggtgatgactataaaatcaaggtttggaactac
aagcagagaagatgtttgttcacgttattgggacaccaagattacatcagaaccacatac
tttcatcatgaatacccatggatcctgagttcctctgatgatcagacaatccgagtctgg
aattggcagtccaggaactgtgtcagtgtactagccggtcacagccactttgtgatgtgc
gccatgtttcacccctcagaggacctcattgtgtcagcctccctggatcagacagtcagg
gtctgggacatctcaggattgagaaagaaaaatgtttcccctggaccggggggtatagag
gaccgaatcaagtcctcgggccagaccgacctgttcggggtttctgatacagtggtcaag
catgtcctagagggacatgatcgtggggtgaactgggctgccttccaccccaccctccct
ctgattgtttctggtgccgacgatcgtcaggtcaaactgtggaggatgaatgattccaag
gcgtgggaggtggacacctgccgtggtcactataacaatgtgtcctgctgtctgttccac
ccgcgacaggaactcatcctcagcaactctgaggacaaaagcatccgagtctgggacatg
agcaagaggactggtgttcagacattcagaagagaacacgacagattttgggtgatgagt
gcccacccctccttgaacatgttcgctgcaggacacgacagtggaatgatcgtgttcaag
ctggagcgtgagcgcccggcctacgctgttcacaacaacatcttgttctatgtcaaggac
agatatctgaggaagctggacttcagcacatccaaggacaaccctgtgattcagctcaga
ggaggcagcaggaacccagttttcagcatgtcatacaatccagccgaaaatgcggttctg
ctctgcactagagccagcaatgctgagaactccacttatgacttgtacgccctgccaaaa
acatcagactctcaaaacccagatgctcctgagggaaagagatcgtcaggcttgtctgct
gtctgggtggctcgcaacagatttgctgtcttagacagaacacataatattgtgatcaag
aatctcaagaatgaaattaccaagaaggtgcaggccccgaattgtgacgacattttctac
gctggcactggttgtctgttgcttagggatgctgatgctgtcacactatttgatgttcag
cagaagagatctctggcctcagtgaagatttccaaagtgaagtttgtggtgtggtcatct
gacatgtcacatgtcgctctcatcagcaagcatgtcattgcaatctgtaacagaaagttg
gagaatctgtgtacaatccatgagaatatcaaactgaagagtggggcttgggatgagtct
ggagtgtttgtgtacaccaccagtaaccacatcaaatacgccctcacgaacggtgactat
ggcatcatccgtaccctggacctacccatctacatcaccaggatcaagggcaacagcgtg
ttctgtctggatcgggaggtcagaccccgagttctctccatcgaccccacagagttcaag
tttaaactcgctcttgtcaacaggaagtatgaggaggtgctccacatggtcaggaatgcc
aaactcgttggacagtccatcatctcctacctacagaagaagggctatcctgaggtggct
ctccacttcgtcaaggatgagaaaactcgatttggtcttgccctagagtgtggaaatatt
gagattgccctggaggcagcccgggctttggatgaccaggcctgttgggagaagttggga
gaggcggcactgttacaggggaaccaccaggtggtggagatggcgtaccagagaaccaag
aactttgacaaactctccttcctatatctcatcacgggcaacctagagaagctcaggaaa
atgatgaaaattgctgagataaggaaggacaccagtggacattatcagaatgctctgtac
ctgggagatgtaggagagcgggtcaagattctgaagggagtcggacagaaatccctggcc
tacctgactgctgctacacatggactagaggaggaggcagaacaattgagggagagcttc
ggggaagacgagaagatccccgaactctacccccaggcccagctgctccagcccccagtt
cccatcatgcaacaggagagcaactggccattgctgaccatgactaagggattctttgag
ggagcaatggcagcagggactgcaggaaccaaacgcacaggtctggcagctgctgcggtg
gacattgaagatggagcaggagagggctggggagacgatgcagacctcgtgctggacgac
gagggaggatttgggggcgagggtctggatgatgaggctctggttggagcctcagaagaa
ggaggtggatgggatgttggggatgatgaccttgaacttcctcctgaccttgacgtgggc
ccagccgccgcagggggaggagaggagggattctttgtacccccaaccaaaggaaccagt
cagacacaagtttggtgcaataattctcagttgcctgtggatcacatcctagctgggtcg
tttgagactgccatgcgtttgctgcatgatcaggtgggcgtggtccagtttgacacgtac
aaacagctgttcctacagaccttctcccgctcaaggacctgctaccagggcctaccctcc
ataccccctctgtttggattccctcacagaaactggaaggaggctggggcacgagcggga
atgcctgcggtgggactgaagctaaacaccctggtacagcagctacaggtggcctaccaa
atgaccaccaccggcaagtttggggaagccatcgacaagttccgcagcattctgctgagt
gtgccactgttggtggtggaaaataaacaggaaatctcggaggcccagcaattagtggag
atatgtagagaatacattgtaggattgtccatggaacagaacagaaaagagctgcccaag
tccacactagaggaacagaagcgaatctgtgagatggcagcctatttcacacactgcaac
cttcagccaatacacatgatcctaacactccggacagcattaaatctcttcttcaaactg
aaaaattacaaaacagctgcatcatttgccaggagactattagaattaggacccaaacca
gacgtagctacacagaccagaaagattttatctgcctgtgagaaaaccccaactgatgct
catgaactaaaatatgaccaacacaatccatttgacatctgtgccgcctcatacgttcca
atttacaggggtaaacctgttgtcaagtgtccactcagtggagcatgctatcaaccagag
ttcaaaggtcaagtgtgccgagttacccaggtgacggagattggcaaagactgcatcggt
ttacgaatcagccccatccagtttagatga
DBGET
integrated database retrieval system