Magallana angulata (Portugese oyster): 128173739
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Entry
128173739 CDS
T09348
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128173739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128173739
Membrane trafficking [BR:
canu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128173739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Vps39_1
CNH
NUP50
zf-Vps39_C
Clathrin
Ran_BP1
Nucleoporin_FG
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
128173739
NCBI-ProteinID:
XP_052695360
LinkDB
All DBs
Position
1:complement(39990289..40030072)
Genome browser
AA seq
1585 aa
AA seq
DB search
MAKRVAERELTDRNWDQEDDVEEAGTFAVATKSELQRRQIKTAKRTGASLGAGGKTSSFS
GFGGFSFKPTQTSTPFSANVKSFTNGKPEKPSLSSVTEVNGTPEKKGVEKKKENDSEQAT
YMSSLRSLNESVLAWIKQHVEKNPYCILTPIFTDYEKHIKTIEAYKSGASQAKSQTTDNS
EKKSAPALGSKETQPSLSTLFKPAPGSWTCGTCMIQNKGDVSKCVACQTSKPGAGASNSQ
TTSAAPALGSKETQPSLSTLFKPAPGSWTCDTCMIQNKGDVSKCVACQTSKPGAGASNSQ
ATSAAPSIGSKETQPSLSTLFKPAPGSWTCDTCMIQNKGDVSKCVACQTSKPGAGASNSQ
AASAGTPDFKFGSNNVSNATTGSGFKLNTGGTTTGASSTSGFTFGSGENKSTASGFKFES
NGMANNSSMTSGFTFGKSEDKSATSGFTFGKKDEKSPSSGITFGKSEEKSPASGFVFGKK
EDKPAAPGFTFGKSDDKPTNSGFTFGKSEDKSTTSGFTFGKSDDKTGSPGFSFGKKEESS
TTSGFSFGKSGTTDTSSSSGLKSGSGNESSSATGFSFGTNAGTGNVPKPAFSFGLGSGTT
NSESTKGFSFAPSTSAPGSSSFGPGFFSRPAGASDAAGTQEEEEYEPPKVESTEIAEEGS
QYSVKCKLFYQRDGKWNEKGVGFLHLKKPDGKAQLVVRADTNLGNILLNISLSPSIPLKR
QGTNNVYMMCVPNPKISPKDEENKPAAMLLDCIDVCGKNLYIGTSDCFVVHYTIEERTQP
SGKVTFHCDKIGHKYLALKKPIVQIKSASALNRIMVLCDNTISMLNMLELEPVMGGAKIK
GVNCFCFNDNPQNSSPFSVEICVALRKKQLQFYTVTEDKFIHLRDVSLSEPAVELDLDSP
FVCVAMTSQYSMINTDTGYEQSLFPYDNENSRPLIKRVGKEEFLLGGPSALGMFVTSDGI
SQRPPLQWSDNLASISYLHPYIIAMNDEFITVHSILDQQQKQTIPFQGGVYLENFDGKVF
IASGRAVYSLVPVAWEKQVQALLADKRVTEALDLAKNANKSGLSRDKINKIYKRFQQQAA
FIEFSQQKFEEALELFKSGETDAREVICLYPKFLPSNSSFTRCAPPLHEIADINQLCRGN
EDLIMQYKDFLCSYLEEIKGTKLAVGYKQEIDVALLKLYAELNTEGLIPLISNDSGCDLN
DCVEWLEKYKRFHALGLLYRLHSDHDKALGIWQKLANGDITDESFPGLPFFIDYLSNLSD
HELVWKYVDWVLSKDPEAGVQIFTNRPASEPPSERMRPDTIIDYLHRFPEAVISYLEYLI
FQKKLEKEKYHTHLAVLYLDSVLQLMKEPNAKKEQIDIARSKLRHMLQMSSLYRVQLILG
KAKETNMHAECAILYGKLEEHDKALRILVHKLKDYGAAENYCMVNSNGKDSVVRKRLFHA
LLNVYLDPSYEQKDQLIKPAVELLNNNVADFDTVKVLQSLPDSWSVHIISQFLSRAVRKS
MNLSRNTRIERMMSRGENLRVKQTSIELQREFVTMNDDRMCAVCNRAFSDPTFVRYPNGV
VTHVHCAKNRHVCPVTGKLFSTKQS
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtgttgctgaaagagaactaactgatagaaactgggaccaagaagatgac
gttgaggaggctggaacctttgcagtagctacaaaatctgaattacaaagacgccaaatt
aagacagcaaaaaggaccggagcctcactgggggctggtggtaaaacttcctccttttct
ggctttggtggattttcttttaaacccacacagaccagcacaccatttagtgccaacgtc
aaatccttcactaacggaaagccagagaagccttcactgagcagtgtgacagaagtgaat
ggaaccccagagaaaaaaggggtcgagaagaaaaaggaaaatgactctgaacaagccact
tatatgtcaagcctgaggagtctaaatgaaagtgtgctggcctggattaagcaacatgtg
gagaaaaatccctactgcatcctgactccaattttcacagactatgagaaacacataaaa
accattgaggcatacaagtctggtgccagtcaagcaaagagtcaaacgacagacaattct
gagaaaaaatctgctcctgctttaggcagcaaggagacccagcctagtttgtccaccctg
tttaagccagcacctggtagttggacctgtggcacatgtatgatacagaacaaaggggat
gtcagtaagtgtgtggcctgtcagaccagcaagccaggggcaggagcatccaactcgcag
actaccagtgcagctcctgctttaggcagcaaggagacccagcctagtttgtccaccctg
tttaagccagcacctggtagttggacctgtgacacatgtatgatacagaacaaaggggat
gtcagtaagtgtgtggcctgtcagaccagcaaaccaggggcaggagcatccaactcacag
gctactagtgcagcaccttctattggcagcaaggagacccagcctagtttgtccaccctg
tttaagccggctcctggtagttggacctgtgacacatgtatgatacagaacaaaggcgat
gtcagtaagtgtgtggcctgtcagaccagcaagccaggggcaggagcttccaactcacag
gctgccagtgcaggcacaccagacttcaaatttggaagcaataatgtatcgaatgccaca
acaggatctggatttaagttgaatactggtgggactactacaggagcttcatctacttct
ggatttacattcggatcaggcgaaaacaagtctacagcatctggattcaaatttgaatcc
aatgggatggcaaacaactccagtatgacatctgggttcacctttggcaaaagtgaagat
aagtctgctacttctggatttacatttgggaaaaaggatgagaagtcgccatcttctgga
atcacatttggaaaaagtgaagaaaaatcgccagcgtctggatttgtatttggaaaaaaa
gaagataaacctgcagcacctggatttacatttggcaaaagtgatgataaacctactaat
agtggatttacatttggcaaaagtgaggacaaatctacaacatctgggtttacttttggg
aaaagtgatgacaaaactggatcaccaggattctcatttggcaaaaaagaagaaagttct
acaacatctggattttcttttggaaaaagtggaactacagacacttcctcctcatctgga
ttgaaatctggatctggaaatgaatccagttctgccactgggttttcatttggtacaaat
gctggaactggtaatgttccaaaaccagcgttcagctttggtttaggaagtggaactaca
aacagtgaaagtacaaaaggattttcgtttgccccatccacctcggctcctggctcttcg
tcatttggtccaggatttttcagcagaccagcgggagcttcagatgccgcgggtactcaa
gaagaggaagaatatgaaccaccaaaagtagagagcacagaaatagcagaagaaggctct
cagtattctgtcaaatgcaaactgttttatcaaagagatgggaaatggaatgagaaagga
gttggttttctgcacttgaagaagcctgatgggaaagcacagctagtagtgagagccgac
actaatctaggaaatattttgttgaatatcagcctgtcaccatctattcctctaaagaga
cagggaacaaacaatgtatatatgatgtgtgtgccgaaccccaagatcagccctaaagat
gaggagaacaagccggcggccatgttgctggactgtattgatgtgtgtggtaaaaacctg
tacattggaacctctgactgctttgttgtgcattacacaattgaagaaagaacccagcca
tctggaaaagttacctttcattgtgataaaataggacacaaatatcttgctttaaaaaag
ccaatagttcagataaaatctgcatctgccctgaatcgaatcatggtgttgtgtgacaat
actatatccatgttgaacatgttagaactggagcctgtaatgggaggagccaagatcaag
ggagtgaactgtttctgttttaatgataacccacaaaacagcagccctttcagtgttgag
atttgtgttgcccttcggaaaaaacagcttcagttttacactgtcacagaagataagttt
atccatctaagggatgtttctctctcagaacctgcagttgaattggatttggatagtccc
tttgtttgtgttgccatgacatcacaatactctatgatcaatacagacacgggttatgaa
cagagtctgttcccttacgataatgagaacagtagacccctgatcaagagggtgggcaag
gaagaattcctgttgggtggtcccagtgccctggggatgtttgtgacatctgacgggata
tctcagagaccacccctccagtggtccgacaatctggccagcatcagctacttacacccc
tacatcattgccatgaatgacgaatttatcactgttcacagcatcctcgaccaacagcag
aagcaaactattccattccagggcggtgtttacttggaaaactttgatggcaaagtgttt
atagcatcaggccgagctgtctattccttagtcccagtggcttgggaaaaacaagtacaa
gctctcttggcagataaaagagtgacagaggctctggacctggccaaaaatgccaataaa
agtggactcagcagggataaaattaataagatatacaagagatttcaacaacaggcagct
tttattgaattctcccaacaaaaatttgaagaggcactggaattatttaaaagtggagaa
acagatgctagagaggtgatttgtctgtatccaaaattcttgccctccaacagcagtttt
acccgctgtgcacccccgctgcacgagattgctgacatcaatcagctatgtcgtgggaac
gaggacttaatcatgcaatataaagacttcttgtgttcatacttagaggaaattaaagga
acaaaattagcagtaggatataaacaggaaatagatgtggcattattgaagctctatgca
gagttaaacacagaaggtctaattccattgatatcaaatgattcgggatgtgatttaaat
gactgtgttgagtggctggagaaatataaacgttttcatgctctaggattattgtataga
cttcacagtgatcacgataaagcgctaggtatatggcaaaaattagctaatggagatata
actgatgaatctttcccaggtttaccattttttatagactatttatccaatttaagtgat
catgaacttgtgtggaagtacgttgattgggtgctgtctaaagatccagaggctggtgtt
cagatttttaccaatcgtcccgccagtgagccgccgtcagagaggatgcgaccagacacc
atcattgactatttacaccgattccctgaagctgtgatatcatacttagaatacctcatc
ttccagaaaaaactagagaaagagaagtaccatacccacctagctgttctatatttagat
tctgtgttacaacttatgaaagagcctaatgccaaaaaggaacaaatagatattgcaagg
tcaaagcttcgtcacatgttacagatgtcaagtctgtatcgagtgcagctcattctagga
aaagcaaaagaaacaaatatgcatgctgagtgtgcaatactgtatggaaagttggaggag
catgataaggccctgcgaattctcgtccataagctcaaggattacggggcggcagagaac
tactgtatggttaactccaatgggaaggactcggtggtccgtaaacgattgtttcatgct
ctacttaatgtgtatctggatccatcttatgagcaaaaagaccagctgataaaacctgcg
gtcgagctgttgaataataatgtagcagactttgacactgtgaaggtccttcaatccttg
cctgacagttggtcagtacacatcatttcccagttcctttctcgtgcagtccgcaagagc
atgaacttaagtcggaacaccagaatcgagagaatgatgtcgcgaggggagaatttacga
gtgaaacagacaagcatagaactacagcgggagtttgtgacaatgaatgatgacaggatg
tgtgctgtgtgtaatcgcgccttcagtgatccaacgttcgtccgatacccgaatggagtt
gtgactcatgtccattgtgcaaaaaaccgacatgtctgccccgtgactgggaaactcttc
agcacaaaacaatcttga
DBGET
integrated database retrieval system
