Magallana angulata (Portugese oyster): 128175254
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Entry
128175254 CDS
T09348
Name
(RefSeq) RNA-binding protein Pasilla-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128175254
Spliceosome [BR:
canu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128175254
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GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Vigilin
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
128175254
NCBI-ProteinID:
XP_052696705
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All DBs
Position
3:21203886..21229800
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AA seq
595 aa
AA seq
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MAMNYDGMNGNEMDTSDSRKRPLETEVDNGVPKRSNQGGGTSDQLHQMMTEEPNGDTVMG
DNVHLKILVPSIAAGAIIGKGGETIAQVQKEAGARVKMSKANDFYPGTTERVCLIMGGVE
AVKRVHCFIMEKIREKPDPNPKPEETNKNFERHRQVKILVPNSTAGMVIGKGGNYIKQIK
EESGAYIQISQKSKETNLPERCITVAGEIDNNRKAVELILQKIVEDPQSGSCPNISYADY
TGPVASANPTGSPFANNAFTQNRSQEMVVNTNNYQAQGATAYSIGFNGNVLNSSLGSGMT
NLNINAALGGNPNGAFTSAGLESLKMTLRGSGYSDQATEEISMAMNTLANYGILNILGLN
QIPGLTMQSMPTQSATLGMNMNSSMGATQMIAATPTTSAQTVNSNSFLNTSNNSTTAGSL
FGPVGSGSSGLGSSGSGAGSSLFGSSSPSMGQERYGGSPMLNDSFGATTYASTPQGFPQM
DRSPNISLNLNQNSFGLGTGMYSPTEDKAGTQKQEMEVAESIVGAILGPGGKGIVELQQF
TQTNIQISKKGVYVPGTRNRIVTVTGTPNNISKARYLIQQRIQQEEIKRAQQAAR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaattacgacggcatgaatgggaacgaaatggacacttcagactcaagaaaa
aggccattggaaacagaagtagataatggggtccccaaacgatcaaaccaaggtggaggt
acatcagaccagcttcatcagatgatgactgaagaaccaaacggcgacactgtcatgggt
gacaatgtacatcttaagatcttagtgcccagtattgccgcgggagccatcattggaaag
ggaggagaaaccatcgcccaagtacagaaagaggctggcgcccgtgtcaaaatgtccaaa
gctaatgacttttacccaggaacgaccgagagggtatgcctgatcatggggggtgtagaa
gccgtcaaaagagtccactgtttcatcatggagaaaatcagagaaaagccagatcctaac
cccaaaccagaggaaacaaataaaaactttgagaggcacagacaggtaaaaattcttgtt
ccaaacagcacagctggtatggtcattggcaagggaggaaactacatcaaacaaatcaaa
gaagaaagtggggcttacattcaaatctcccagaagtcaaaagaaaccaatcttcccgag
cgctgtatcactgtggctggggaaatagacaacaatagaaaagcagtagagctcatctta
caaaaaattgtagaggatcctcagagcggaagttgtccaaatataagctatgcagattat
actggacctgtagctagtgctaaccctactggatcaccctttgcaaacaatgcattcaca
caaaatcgtagtcaagaaatggtggtgaacacaaacaattaccaggcacaaggtgccacc
gcgtacagtataggatttaacggaaatgtactaaacagcagtctaggaagtggaatgaca
aatttgaatataaatgctgcattaggagggaatccgaacggagcctttacgtctgctggg
ttagagagtctgaaaatgactctacgaggcagtggttattccgatcaggctaccgaggaa
attagtatggccatgaacactttagctaattacggaattctgaacattctgggattgaat
cagattcccggcctcacaatgcagagcatgcccacccagtccgccaccctcggcatgaac
atgaattcatccatgggagccactcagatgatagctgccacccccaccacctctgcacaa
accgtcaacagtaactcatttctgaacacaagcaacaactccactactgcaggtagtcta
tttgggccagtaggcagcggatcctctggactgggtagttccggctcgggggccggctct
agcctgtttggtagttcctctccaagcatgggtcaggaaaggtacggcggaagtccaatg
ctgaacgattcatttggtgctactacatatgctagcactccacagggattccctcagatg
gacagatctcccaacatcagcctgaatttgaatcagaattcatttggactgggaactgga
atgtacagccccactgaagacaaagcggggacccagaagcaggagatggaggtggctgag
agtatagtgggggccatactaggacccggggggaagggaatagtggagctccaacagttc
actcaaaccaacattcagatatcgaaaaaaggagtttatgtgcccggaacacgtaaccgc
attgtcaccgtaacaggaacgcccaataatataagtaaagccaggtatctaatccagcaa
aggatccaacaggaggagatcaaaagggctcagcaagctgctcgctag
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