Magallana angulata (Portugese oyster): 128175398
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Entry
128175398 CDS
T09348
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128175398
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128175398
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
Helicases
128175398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
128175398
NCBI-ProteinID:
XP_052696960
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All DBs
Position
3:12963812..12972460
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AA seq
564 aa
AA seq
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MDGFDLFRKLGVGTKFDFKRFKSDANVLNLLPAASVSKSATKKARLDAGHEQQESDNEVQ
EAPDVNHEKHTEEGDLTVLQGLKKKGEKQRTKKSKQSFAQMKQEKINHIRNKNRIHCFGQ
DPPNPCTSFEQLAATYGLNPQIIKNIASIGYTQPTPIQIQAIPAMMDRREILACAPTGSG
KTAAFLLPIMHHLKEHKKKGYRALILAPTRELAKQIYREFLRLSEGVGLKAHYISKSTTE
KRLEKKYDVLVSTPNRLVYMLQEDPPLINLSQVEWLVIDESDKLFEDGKTGFRDQLAKVY
QACNSNNVKRAMFSATFAVEVEEWCKLNLDNVLQVYIGAKNSATTTIEQELKFVGTESGK
LLAVRDIIAKGVQPPVLIFVQSKERARELFHELIYDGMNVDVIHSDQTQEQRDNAVKNFR
SGKTWILICTELMGRGMDFIGVNLVINYDFPNSAISYIHRIGRTGRAGRSGRAITFFTEN
DSMYLRSIARVMVNAGCPVPNYMLDMKRPNKKIRRAAKRVPKRDRISTVSQYDIDKLNKK
RKYISKDKGKSNKRAKLKRGAEKS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatggatttgatttgtttcgaaaattgggagtgggaacaaaatttgattttaaacga
tttaagagtgatgcaaatgtcctaaatctactaccagctgcttctgtgtcgaagtctgct
acaaagaaagcaagattagatgctggtcacgaacagcaagaatctgacaatgaagtgcaa
gaagcaccagacgtaaatcatgaaaagcatacagaagagggagacctgactgttttacag
gggcttaagaaaaaaggagaaaaacaacgcacaaagaaatctaaacagagctttgctcag
atgaaacaagaaaagataaaccacataagaaataaaaacagaattcattgttttgggcaa
gatccgccaaatccttgtacgagctttgaacagttagccgctacttatggacttaatcct
cagatcatcaaaaacattgcttccattggatacactcaaccaactcccatccaaatacaa
gctattccagcaatgatggataggagagaaatattggcttgtgcacccacaggatcagga
aaaacggcagcttttctccttcccatcatgcatcacttgaaggagcacaaaaagaaaggc
taccgagctctgatactggctccgacccgcgagttagccaaacagatatacagagagttt
ttaagattatcagaaggtgtaggacttaaagctcattacattagtaagtcaacaacagaa
aaaagactggagaaaaaatatgatgtgttggtttctacccccaatagactggtgtatatg
ttacaagaggatcctccccttatcaacctcagtcaggtggaatggctggtaattgatgaa
tcagataaattgttcgaagacgggaaaactggcttcagagatcagttggccaaggtttat
caagcctgtaacagcaataatgtcaaacgagccatgtttagtgcgaccttcgccgtggaa
gtagaagaatggtgtaaactgaacttggataatgtgttacaagtgtacataggagccaag
aattctgctacaacaacaatagagcaggaactaaagtttgtgggaacagaatcaggaaaa
ttactggcagttcgtgacatcatagcaaagggagttcagcctcctgtcctaatatttgtt
cagtccaaggaaagagcgagagaacttttccatgagctgatttacgacggaatgaatgtg
gatgttattcacagtgatcagacacaagagcagagagataatgctgtcaaaaatttccgc
tcagggaagacttggatattaatctgtacggagttgatgggaagaggaatggacttcatt
ggagttaatctggtcattaattatgatttccccaacagtgccatcagttacattcacaga
ataggtcgtactggaagagctgggcggtcggggagagccatcacattcttcacggagaat
gactccatgtacctcaggagcattgctcgagtgatggtgaatgcgggatgtcccgtccct
aattacatgttagatatgaaacgtccaaacaaaaaaataaggagagctgctaagagagtt
ccaaagcgagatcgaatctcaaccgtctctcagtatgacattgataaactcaacaagaaa
aggaaatacatatcaaaggacaagggaaaatcaaataagcgagcaaaactgaagagaggt
gcagaaaaaagttga
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