Magallana angulata (Portugese oyster): 128175404
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Entry
128175404 CDS
T09348
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128175404
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
128175404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
HMG_WDHD1
ANAPC4_WD40
Beta-prop_Vps41
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR19_2nd
HMG_box
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
DUF6476
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
128175404
NCBI-ProteinID:
XP_052696967
LinkDB
All DBs
Position
3:12978692..12996121
Genome browser
AA seq
1015 aa
AA seq
DB search
MPSCSPLRYAHSEGLTSLCYDDKGKYILTCGSDGDVRIWEGAEDDDAISHGTGDKAFCVA
YKNDRFYIATDANTVQAYTFPGGSPDGILARFTAPANHICINQMGTTLVAGSSDFTIKLV
DISSGDTKKFEGHEAPVLSVALDPKEEFLASSSCDGSVVIWRVENKEKVKKFQILPKVGD
ISLTKGLCRLCWEKNGQFLYVPLENEIQIYDRNSWSTTGSIQDSQFSGVYSVLDLSTDGT
HLAAGCYDGHILIFDLKTKTCVDRFKHESGLSIMSLSWNPSNQTEIAFCDREGQLGLLSE
INLIGGNQPAKEQRVKETLGIFEDDDDDAELVQASDEPSKEQIFDEDSNDSTPASVLKPL
DDDLASEDGEAPPVIPVQTRIIERPGFVPTPPQGAFQPGSTPKHLSSRFMMWNAVGIIKQ
FNTEEEESIDIEFHNTAIHHAMHLTNSAGYTMGDVSTEAVVLASPGEDSDPSKLTCMHFG
SWDNSKEWTIPMDDGEAIEALAIGEDWIAVATSGRLIRIFSLGGIQRDIFSIPGPVVCLS
AHTNQLLIAYHRGMGLPGDQCLGVHLMTVEGATQINHQPLPLSHKSSLAWMGFSAEGTPF
YMDSSGIVRMCNRRFGMSWVQVANTKSHTKGKSDNYWIVSVHENPQQLRCIPCKGARFPP
VLPRPAVGILPFQVPLCQMNTEKSQYEEVFHRTQLLSSHLQFWNTIGYEYDTSIASELAK
PSQEALMKLFALSARSDREFRALEVCEMMSEPHTLQLAIKYACRLKYMQLAERISEVVQR
KSAEQAEEVEEEEEEVVHRVQRVHNHQNHVQENEEMEEEDVEVDQENAETNSAGGPLLNL
KAKSKNEVLSQSYGSSGRSNPFKVLTPQKPEPTKGTQVFDGMSKKKQTSPGQVMLKNTRP
VKAVKRTPQSQGKITSVKSTNEEDKQEESQKKSKSAFDLWFEETKSQLMEELPEADEESL
VQTAAERFRKIPKEERQIWIQKSKEGDNKKRKREEEEIPTRKVNPKLAGFAFSKD
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctgttcgccgttgcgatacgctcacagcgaaggattaacaagtttgtgctat
gacgataaaggaaaatatatcttgacctgtggctcagatggagatgtcagaatatgggaa
ggggcggaggatgatgatgctatatcccatggaactggtgataaggcattctgtgttgca
tacaagaatgacagattttacatcgctactgatgcaaacactgtgcaggcatatactttc
ccagggggctctcctgatgggattctggcaagatttactgcccctgccaaccatatctgc
atcaaccagatgggaacgacattagtagctggatctagtgacttcacaataaaacttgtt
gacatttcctctggggacaccaagaagtttgaaggacatgaggcccctgtattaagtgta
gccttagaccctaaagaagaatttctggcatcctctagttgtgatggaagtgtggtgata
tggagagttgagaataaggagaaagtgaaaaagttccaaatccttcccaaagtgggtgac
attagtttgaccaaaggattgtgtaggctatgttgggaaaagaatgggcagttcctgtat
gttcctttggagaatgagatccagatctacgacagaaattcctggtcaacaactggatca
atacaagacagtcagttttctggagtgtactctgtcctggatctctcaactgacggaaca
cacctggcggcaggatgttatgacggccatattctcatctttgacctcaaaaccaaaacc
tgtgtggataggtttaaacatgagagtggattgtccatcatgtcactatcttggaatcct
agcaaccagacagaaatagcattttgtgatagagagggacagcttggacttttgagtgaa
ataaatcttataggaggaaaccagcctgcaaaggaacaaagagtaaaagagactctgggg
atttttgaggatgacgatgatgatgcagaattagttcaagcctctgatgagccgagtaaa
gagcagatttttgatgaagacagcaatgactcaacaccagccagtgtcttaaagcccctt
gatgatgacttggcatcagaggatggtgaggctcctccggtcatcccagtacagaccaga
atcattgagagaccggggtttgtaccaacaccccctcaaggggccttccagccaggatcc
acccccaaacacctctctagcagattcatgatgtggaatgctgttggaattataaagcag
tttaacacagaggaagaggagtcaatagatatcgagttccacaacaccgctatacaccat
gccatgcacttaacaaactcagcgggttacactatgggggacgtctcgacagaagctgtg
gtcctagccagcccgggggaggactctgacccaagtaagttgacctgcatgcattttgga
tcttgggataattctaaggagtggaccattcccatggatgatggagaagcaatagaggct
ctggcaatcggcgaggactggattgcagtagccacctcagggagactaatcagaatcttt
tctctgggaggcatccagagggatattttctccataccaggtcctgtggtgtgcctctca
gctcacacaaaccagctgctcattgcctaccacagaggaatgggtttgccgggagaccag
tgtcttggagtacatctgatgacagtagagggagccacccagataaaccaccagccactc
cccctgtcccacaagagctcacttgcttggatgggattttctgctgaaggcacacctttt
tacatggattcatctggaatagtgagaatgtgtaatagaagatttgggatgagctgggtg
caagtagcaaataccaaatcacatacaaaaggaaaatccgataattactggattgttagt
gtacacgaaaatccccaacaacttcggtgtataccttgtaagggggcccgctttcctccg
gtcctcccccgaccagctgtgggaatccttcccttccaggttcccctttgtcaaatgaac
actgaaaagagtcagtatgaggaagtatttcacagaacacagttgctaagcagccattta
cagttctggaataccattggttatgaatatgacacttcaatagctagcgaacttgctaag
ccctcacaagaagccctgatgaaactatttgctttatctgctagatcagatagagagttt
cgggctttagaggtttgtgagatgatgtcagagccacacactctgcagctagccattaaa
tatgcctgtcgcctgaaatacatgcagctggccgagaggatcagtgaggtggttcagagg
aagtccgctgaacaagcagaggaggtggaggaggaagaggaagaagtggttcatagggtt
caaagagttcacaatcaccaaaatcatgttcaggaaaatgaagagatggaagaagaagat
gtggaggttgaccaggaaaatgcagaaacaaacagtgctggtgggcctttgttgaatttg
aaagccaagagcaaaaatgaggtgttatcccaatcttatgggtcttcagggaggtctaat
ccattcaaggttttaacaccccagaaaccagaaccaacaaaaggaactcaggtgtttgac
ggcatgtcaaaaaagaaacagacgagtccaggacaggtcatgctgaaaaatacgagacct
gtcaaggctgtaaagagaactcctcagagccaaggaaagataacttctgtaaagtcaaca
aatgaggaagacaaacaggaagaatcacagaaaaaatctaaaagtgcttttgacctgtgg
tttgaagagacaaagtctcagctaatggaggaattgccagaagcagacgaagaaagtttg
gtacaaaccgctgcggaacgattccgaaaaattccaaaggaagaacgacagatctggatt
cagaaatcaaaagaaggagataataagaagagaaaacgagaagaggaagaaattcccaca
aggaaggtcaaccccaaactggcaggctttgccttctccaaagactaa
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