Magallana angulata (Portugese oyster): 128175499
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Entry
128175499 CDS
T09348
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128175499
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
canu04812
]
128175499
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
128175499
Membrane trafficking [BR:
canu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128175499
Cytoskeleton proteins [BR:
canu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
128175499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
MIT
TIP49
AAA_5
Mg_chelatase
AAA_14
AAA_16
AAA_2
IstB_IS21
nSTAND3
AAA_33
NPHP3_N
AAA_24
RNA_helicase
AAA_17
Motif
Other DBs
NCBI-GeneID:
128175499
NCBI-ProteinID:
XP_052697099
LinkDB
All DBs
Position
3:39729284..39741506
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AA seq
618 aa
AA seq
DB search
MNRKGNGRFFGRRRGDKSKGPQRQRIPFYRRNFDFAARPILFIFGLIRQIAFQLWLVLTL
VVCKSRNLSREGTYRRIRADVTADAESAMTSPARAKSPSPAEPILTQQKHYHRKAFEYIS
KALKIDEEDAGKKDQAVEMYRKGIDALQKGIAVEVNYGHGESWDKARRLQEKMITNLVMA
RDRLEVLEKALLLCAQEPLISDIAEGVDRNPNLRERRPASNDAQAPSGRAQKPPSTGEVN
KRKASEGSEAAATSKTNKPLRQKPMAIHKSNSLPRSNPRAENKINSPAAAREYYKQTPRL
NAPGSKKKPDLSKMKLKNVDKNIAETILNEILDTGPTVTFKDIAGQEAAKEALQEIVILP
ALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVANESNATFFNISASSLTSKWVGEGEK
LVRAMFVIARELQPSVVFMDEIDSLLCERREGENDASRRLKTEFLVHFDGVSGIAGSGDD
KVLIMGATNRPQELDNAVLRRFVKRVYVRMPNKDTRKGMLCHLLSKHGNPLSSQELDHIA
RLTEGYSGSDLNALAKDAALGPIRGLSAKEVKTVDANQVRNIKKEDFEEALRRIRRSVAP
DSLKQYEDWNSEYGAVGF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagggaaacggtcggttttttggccgaagaaggggtgataagagcaaagga
ccgcagcgacaaagaataccattctacagacgaaattttgacttcgcagccaggccgatt
ttgtttattttcggtttgattcgtcagattgcattccaactttggctcgtgctcactttg
gtggtctgcaagtcccgaaatttatcacgagaaggtacttaccgtcgaattagggctgat
gtcacagcggacgctgagagcgctatgacgtcaccggcaagagcaaaatcgccgtcccct
gcggaacctatactgactcaacagaagcactaccacagaaaagcatttgaatatatttca
aaggcgctcaaaatagacgaagaagatgcagggaagaaggatcaagcggttgagatgtac
agaaagggaatagatgccctacaaaaaggcattgcagtggaagtgaactatggccatggt
gagtcctgggacaaagctcgcagacttcaagagaagatgatcacaaacctggtcatggcc
agagacagactagaggtgcttgaaaaagcattactcctctgtgctcaagagcctctcata
tcagacattgctgaaggggtagatcgtaatcccaatttacgtgaacgtcgaccagcatcg
aatgatgctcaagcaccgagcggcagagcccagaaacccccctctacaggtgaggtaaac
aagagaaaggcgtctgaaggcagcgaagctgcagcaaccagcaagacaaacaaaccttta
agacagaaaccaatggcaatacataaaagtaattcacttcccagaagcaatccaagggca
gagaacaaaataaacagcccagcggcggccagagagtactacaaacagacgcccagacta
aacgctccaggcagtaagaaaaaaccagatttgtccaagatgaaattaaaaaacgtagac
aaaaatatagcagaaacaattctgaatgagattttggacactggacctacagttacattt
aaagacatagctggacaggaagcagctaaagaggccttacaggagattgtcatactccca
gccttacgaccagagttattcaccgggctgagagcccctgcccgtggcctcctcttgttt
ggtcccccagggaatggtaaaactatgctggctaaagcagtggccaacgaatccaatgca
acattcttcaatatcagtgcctcaagtctcacatccaagtgggttggtgaaggtgaaaag
cttgttagagctatgtttgttattgctcgagagctccagccatcagttgtgttcatggat
gaaattgattcgcttttatgtgagcgaagggaaggggaaaatgatgctagtcgcagactg
aaaacagagtttcttgtacactttgatggggtgtctgggattgcaggcagtggtgatgat
aaagtattaattatgggtgccaccaatcgaccccaggagttggataacgcagttctaagg
aggtttgttaaacgtgtgtatgtgaggatgccaaacaaagacacacggaagggtatgcta
tgtcacctgttgtccaaacatggcaaccccctgtccagtcaggagcttgaccatatagca
cgattaacagagggctattcaggaagtgaccttaatgcacttgccaaggatgcagcttta
ggtccaattagaggtttgtcagcaaaagaggtcaaaactgtggatgcaaatcaggttcga
aacataaagaaagaagactttgaggaggccctcagaaggattcgccggagtgttgcacca
gatagtttaaaacaatacgaggactggaactccgaatatggtgcagttggtttctga
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