Magallana angulata (Portugese oyster): 128175530
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Entry
128175530 CDS
T09348
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128175530
Membrane trafficking [BR:
canu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128175530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
128175530
NCBI-ProteinID:
XP_052697186
LinkDB
All DBs
Position
3:46567356..46595373
Genome browser
AA seq
1999 aa
AA seq
DB search
MDDRRVADYFVVAGLPDNPLPLEEFSNEAAIKPTYKQDPITDIAVIDKTLGEKVPKGYTC
IERTQFNYLADLNHGSIRCHEMFLCYKRGRDKPPLTDVGVLYEGKERLMSECEIVHTTPW
GSPANVNNGSNGRIYITFRRARETAASDTLAVVDVVIVLQNKNEVAPHAYHKIEKNLNRG
MVGSDVFVCYKKAMVKADILAYKPGLIQRYPEEDYENFPLPPEVPQFCLPMGSSIECWSA
KAQHPLPVFSTFVLTLANNEKVYGAAVTFYEEFEEEKLTDLQMRHLGLKNKHIREQYRIL
KTVHSNKSICLLSHWPFFDAFRKFLTYLYRISITGPHPVPIERHISHFMFDVPYPSPQRP
RILVQLNHDALSLSMPEDSPLPQSGASYVTMLKNMGPENCMSLLLYSLLEYKILVHSLRP
AVLTGVVEAVAGMIFPLHWQCAYIPLCPLGLSDMLSAPVPYIVGIDSRYFDLYDPPPEVV
CVDLDTVTISLPEDKKGVNYRSLPKKPARVLQDTLHKLFDELSTRHGLGHNIDEINLEMG
SFDTDFKKKRKEDLSLVFERKTLLELSIQEALLRFMACLLKGYKNFLKPITKAPTESTTD
PASLFDIQGFLRSRDKSNLKFFQQMVKTQTFISFISERSFVSDKDASIAFFDECMEKVDE
TKDEPKLIDIDESQNSERTVFIMPPDPTGLPEGKTYSYNGFPELRSELFLRKQISNVSLN
EKPAKSMHEPLSRRTKQEIRSAQKMALQYANDPQLWAKCLLSHCYSLWFIHLPAYIEQSK
ALNKCMKEAYDVLQKMQLAKLHPPDEMCYRVMLQLCCLYNQPVMAVKVLYQMKRANVQPN
AITYGYYNKAVFEGTWPSTRSNASILWRKLRNVIIGAAQFRRRLRRRSMSLNSNSGSDYD
RVSRTSIDSFLEDQSEHRSTGIMVKSDIFSDSSQISTASKGTMSSSTTTAKDESSSTGGV
SDKGYNSMSREELKSLTHQPSSGETDSEQQKANKEKTSLRFTLPSTHKGKEKKEVNGGNP
EITFSEVEPDFRNRVGSIVRKSMGSVSSSGSHETLKGSMMTSSQAGLLMLSQNSLDSTSF
PQDVNLQSSLNAGDNKRKRHRSAGDYHTKTSRSNSVFNNWRPRHISGDPSCIGRTPKEIL
LDDDIFVEENVISRGNLEGINETVDSGVIVEDPQGGALHSDRPQGLDLNHSADPEDSGTQ
PCDIPQRKSLLDGLGNVVHSVGTPVTENDPLGLFNEDDPGEEGQGEEKVVMRRKNIQTQP
FKSERLNYGRHSANFDADIHPEATLLVDPEDPDVVYSVREIDPSEAGIQCNIPDEQKASF
RIGSGLSLDDSLSTEYFGGGPRPLSQMEKIGKRLMGRTQSTPDNLDEQDRTSKSGLSAVT
NYLKSFQSPTKKSQDSLDEAGGTPSESRFRRLGSFRKGERLSGAFKSAAGALMSKVNEIK
QTISTPVKYGSSHSLGRSSDNLDVDEKRGRDMPGRSLDHHRKHRNPLEEFDNLHPYPNSS
LPSSSFMEQYVPLKEFGENKSVTFASLENTLQNIAMEIEISSCFRCNRCRALLYDEEIMA
GWSADDSNLNTTCIFCQNKLVPKLQIYVKDWRGGNVSSVEGSKDDDTDKQSSTTDTDAHS
SHSNHDPWVLQDKINSISSLDNSNNDLFFGEEHLEGEGPLNVLESPERAKRDSHLAKAAV
SNTASSRSSSSIDLEGIALNSRRRCASECFTNSTDNMMYGSSFDSVEDYGGYLSSPIRIS
IGEDVELPTGPDPTPEMKKDFMERCTTSVDPITVPYLSPLVLRKELDNILANEGDLSLGS
DEFLDQHPIIFWNLVWYFKRLEVPSHVPGFLLTAKSINGEEGNVGVYSSKHVLIRPMWDN
VRIHEEVGLPMYRSWNEGRSSHMVDALITEAQPFNKAILHQIIESIMCNDLLTPIKLVMN
CRRRLRLRKSRHRSMYRDIVFLAFVACGKENIDNDAFDREYRQAFNKLSHMEIKRTQRDD
RPRKTRIIWCRKVFGELEV
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggcgagttgcagactactttgtggtggcagggttgccagacaaccccctc
cccttggaggagttctccaatgaagcggcaatcaaaccaacatacaaacaagaccccatc
acagacattgccgtcatcgacaagaccctgggagaaaaagtccccaagggctacacctgt
atcgagaggacacaatttaactaccttgcagacctgaatcatggcagcatcaggtgccac
gagatgttcctgtgttacaagcgggggagggacaaacctccgctcactgacgtgggggta
ctttatgaggggaaagagagattgatgtctgaatgtgaaattgtacacaccacaccctgg
gggagcccggctaatgtgaataacggtagcaatgggaggatctatataacgtttcggcgg
gcacgggaaacagcagccagtgataccctggcagtagttgatgttgtcattgtactgcaa
aataagaatgaagtcgctcctcatgcctatcacaaaatagagaaaaacttaaacagagga
atggtgggctctgatgtatttgtgtgttacaagaaggccatggtgaaggcagacattctt
gcctacaagcctggattgatacaaagataccctgaggaagattatgagaattttcccctg
ccccctgaggtgccccagttctgtctccccatgggatcctcaatagagtgttggtcagcc
aaagcccagcatcctctccccgtcttctccacatttgtactaacactggctaataatgag
aaggtttatggtgctgctgtcacattttacgaggaatttgaggaagagaaactgacagat
ttacaaatgagacatttaggactgaaaaataaacatattcgagaacagtatcggattctt
aaaactgtacattccaataagagtatctgtcttctttcccactggccgttctttgatgcc
ttcaggaagttcctgacttacctgtaccgtatatctataactggtccccatcccgtcccc
attgaaagacatatatctcacttcatgtttgatgttccgtacccatctcctcaaaggccg
aggattcttgtgcagttaaatcatgatgccctctctttgtccatgccagaagattctcca
ttaccccagagtggagcgtcgtacgtgacgatgctgaagaacatgggtcctgagaactgc
atgagtttactgctgtacagtctgctggagtacaagatactggtccactcactgcgtccc
gcggtgctgaccggggtcgtggaggccgtggctgggatgatcttccccctacactggcag
tgtgcatacattcctctctgtcccttgggactctctgatatgttgtcagccccggtgcca
tacattgtaggtattgactcgagatactttgacctgtatgacccgccccctgaagtggtg
tgtgttgatctggacacggtcaccatcagtctcccggaagataaaaaaggtgtaaactat
aggagcttgccaaagaagccagcccgagtcctacaagacactctacacaagctgtttgac
gaattgtccaccagacacggccttggtcacaacatcgacgagatcaaccttgagatgggc
tcgtttgatactgacttcaagaaaaagagaaaggaggacctttctttggtctttgaaaga
aagaccctgctggagctgtccattcaggaagcgttgctgaggttcatggcgtgtctgctg
aagggctacaagaacttcctcaaacccatcaccaaggcccccacagagtcaaccaccgac
ccggcctcactctttgatattcaagggtttttgagaagcagagacaagtccaacttgaag
tttttccaacagatggtaaagactcagactttcatcagttttatctcagagagatccttt
gtctctgacaaagatgccagcatcgctttctttgatgagtgcatggaaaaggtggatgag
acaaaagatgaacccaagttgatagacattgatgaatctcagaacagtgagagaacagta
tttataatgcctcctgacccaacagggttacctgaggggaaaacatacagttacaatggt
ttccctgagttgcggtcagagttgttcctcagaaagcagatctctaatgtttctttgaat
gagaaacctgctaaaagtatgcatgagccactgtctcgaagaacaaagcaggaaataaga
tcagctcagaagatggctcttcagtatgcgaatgatcctcaactctgggccaagtgcttg
ttgagtcactgctacagcctgtggtttatccacctgccagcgtacattgaacagtccaag
gccctcaacaaatgtatgaaggaggcctacgacgtcctacagaagatgcagctggcaaaa
ctacaccctcctgatgagatgtgttatcgtgtgatgcttcagttgtgttgtctctacaac
cagcctgtcatggctgtcaaagtcttgtatcagatgaagagggccaatgtccaacccaac
gccatcacctatggctactacaacaaggcagtgtttgaaggaacttggccttccaccaga
agtaacgcctccatcttgtggagaaaactcagaaacgtcatcattggagcggctcagttc
cggaggagacttcgccggcgaagcatgtcccttaactccaactccggcagcgactacgat
cgtgtgagtcgcaccagcatcgacagtttcctggaggatcagtcagagcacaggagtaca
gggataatggtgaaatcggacatcttcagtgattctagtcagatcagcacggccagtaaa
ggaaccatgtcctcctccactacaaccgccaaggacgagagcagcagcacgggtggtgta
tccgacaagggctataactcaatgtccagagaggaactgaaatccctaactcatcaacct
tccagtggagaaacagactcagaacagcaaaaagccaacaaagagaagactagtctacgg
tttacactgcccagtacacacaagggcaaagagaagaaggaagttaatggaggaaatcca
gaaatcacattcagtgaggtcgagcctgactttaggaatcgggtgggcagtatcgtcagg
aagtcaatgggtagcgtgagcagctcaggcagccatgaaaccctcaaaggaagtatgatg
acaagctcacaagcagggctgctgatgttgagtcagaactctctggattccacatcgttt
ccacaggatgttaatctccagtccagtctaaatgcaggtgacaacaagcggaaacgccac
aggagtgctggagactaccacaccaagacctcgcggtccaacagtgtgttcaacaactgg
cgtccgcgacacatcagtggtgaccccagctgtataggaaggactcctaaggagattctg
ttggatgacgatattttcgtggaggagaatgtaatttccagggggaatctggagggaatt
aatgagacagtagacagtggtgtgattgtggaggatccacagggtggagctctccacagt
gatagaccacagggactggatctaaatcattccgcggatccggaggattcaggcacccag
ccttgtgatattcctcagaggaagagcttattggatggattaggtaatgttgtacattcc
gttggaactcctgttacagagaatgatcctctggggttatttaatgaagatgatcctggt
gaggaaggacagggagaggagaaagtggtcatgaggcggaaaaacattcagactcagcct
tttaaatcagagaggctaaattatggaagacatagtgctaattttgatgcggatattcac
ccagaagcgactcttctggtcgatccggaggatccagatgtggtgtatagtgttagagaa
atagacccgagtgaagcagggattcagtgcaatattccagatgagcagaaggcttcgttc
aggattggatcaggattaagtctggatgactccttatccactgagtattttggaggagga
ccaagacctttatctcaaatggaaaaaattggaaaaaggttaatgggaagaacacagagc
actccagataatctggatgaacaagatcggacaagtaaatctggattaagtgctgtgaca
aattatctcaagtcttttcagtcgcctacaaaaaaatcccaggactcattagatgaagca
ggtggtacaccatcggaatccagattcagaagacttgggagttttcggaaaggagaacgg
ttaagtggtgcttttaaatcagcagcaggtgctctgatgagtaaagtgaatgaaataaaa
cagacaatttctacccccgtgaagtatggctcctctcactccctggggaggtccagtgat
aacctggatgtagatgagaaaagagggagagatatgccgggaagatctctggatcatcac
aggaaacacagaaatccgctcgaagaatttgataacttacatccttatcctaatagtagt
ttaccatcttcctcttttatggagcagtatgtccctctcaaggaatttggtgaaaacaag
tctgttacttttgcaagtttagaaaatacattacaaaacattgccatggagattgaaatt
agcagctgtttccgttgcaatagatgtagagctcttttgtatgatgaggaaataatggct
ggatggtctgctgatgattcaaatcttaacacaacctgtatattctgccagaataaactt
gtgccaaaactacaaatctatgtgaaggattggcgtggtgggaatgtgtcctcggttgag
ggcagcaaggacgacgacacggacaaacagtcctctacaactgacactgacgcacactct
agtcactcaaaccacgacccctgggtcctccaggataaaatcaattccatctctagtcta
gacaactccaacaatgacctcttctttggggaggagcatctagagggggaggggccactc
aatgtgttggagtcccccgagagggccaagcgggacagtcacctagccaaggcggctgtg
tccaataccgccagctcccggtcctcaagttccatagatttggagggtatagccctgaac
tctcggcgacgctgtgccagtgagtgcttcactaactctacagacaacatgatgtacggg
tcgtcatttgactcggtggaggattatgggggttatttgtcttctcctattcgtatttct
attggagaagatgtagaattacccacaggtccagaccccacaccagaaatgaagaaagac
ttcatggagcgctgtacaacctctgtggatcctatcaccgtcccatacttatctcccctg
gtcctccggaaggagctggataacatcctggccaatgaaggagacctctccctgggctcg
gacgagttcctggaccagcatccgatcatattctggaacttggtgtggtacttcaagcga
ctggaggtccctagtcatgtccctggtttcttactgactgccaagtccatcaacggagag
gagggcaatgttggcgtatacagtagtaagcatgttttgatacgccccatgtgggataac
gtccgcatccatgaagaagtgggtctgcctatgtacaggtcatggaatgaaggtcgaagt
tctcacatggtcgatgcactgattacagaggcgcaacctttcaataaagcaattttacat
caaattattgagagcatcatgtgtaatgaccttttgacccctataaaactggtgatgaac
tgtcgtcgaaggctgcgtctaaggaagagtcgacacaggagcatgtaccgagacatcgtt
ttcctggcctttgtggcctgtggcaaggagaatattgataatgatgctttcgatcgtgaa
tacagacaagcattcaacaagctgtcacacatggaaatcaagcgaacacagagagacgac
agacctcgcaaaactagaatcatttggtgtcgaaaagtgtttggggaattagaagtgtag
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integrated database retrieval system
