KEGG   Magallana angulata (Portugese oyster): 128176376
Entry
128176376         CDS       T09348                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128176376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:canu03000]
    128176376
   03021 Transcription machinery [BR:canu03021]
    128176376
Transcription factors [BR:canu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    128176376
Transcription machinery [BR:canu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128176376
  RNA polymerase III system
    TFIIIB
     128176376
  RNA polymerase I system
    SL1/TIF-1B
     128176376
SSDB
Motif
Pfam: TBP DSPc DacZ_T PTP-SAK Y_phosphatase PTP-NADK
Other DBs
NCBI-GeneID: 128176376
NCBI-ProteinID: XP_052698613
LinkDB
Position
3:complement(4293894..4312100)
AA seq 469 aa
MDGSGQNFASFGSGLTPQHQQSPMMSPAALSSFSLGATPNPVMPPSNASLYPPQTPLAPM
TPGVPVTPGGPPITPGGPMTPATPASEGGAGMVPLRPQLQNIVCTVNLGCKLDLKKIALH
ARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDQAKLAARKYARIVQKLGF
AAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFV
SGKVVLTGAKDWEYAMRREMQEIVPNLYLGPYATANKNKLGYLESIGITDIICVRHTAEA
NFIKPNFPEKIRYLVLNVADIYTENIIQYFPQVKAFIEDSFARNGKVLVHGNAGMSRSAS
LVIAYIMEKYGLSYRDAFVYVQQKRFCIHPNEGFVQQLHEYEPMYRAKLSFEHSYTPLES
GMLKRKFTEDPEPSHDDSFFIGSWHPADWPQLWLAVSSLSLGVRTANSP
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggacggatcgggacaaaactttgcatcatttgggagcggtcttaccccccagcatcaa
caaagtcccatgatgtcaccagcagctcttagcagtttttctttgggagccactccaaat
cctgtaatgccaccatccaatgcaagtttataccctccacaaactccattggcgcccatg
actcctggtgttccagtcacccctgggggacccccaataactccaggaggacccatgaca
ccagcaaccccagcctcagaaggtggtgctggaatggttccactcaggccacagttgcag
aatattgtttgtactgtaaatcttgggtgtaagttggatctaaaaaagattgctcttcat
gccagaaatgccgagtataaccccaagcgatttgctgctgtcatcatgaggatccgtgaa
ccaaggacaacagctcttatatttagttcaggaaaaatggtgtgcactggagccaagagt
gaagatcaggcaaagttagcagcaaggaagtatgcaaggattgtccagaaattagggttc
gcagcaaaattcctggattttaagattcagaacatggtaggaagctgtgatgttaaattt
ccgatcaggttagagggattggtcttgacccatggccagttctccagctacgagcctgaa
ttgttccctggcctgatttacagaatggtgaagcctcgtatcgttttgcttatttttgtc
tcaggaaaagtcgtacttacaggagccaaagattgggagtatgcaatgaggagagaaatg
caggagatagtgcctaacctgtatcttggaccctatgcaacagccaacaaaaataagtta
ggttatttagagtcaataggaataactgatatcatctgtgtcagacatactgccgaagca
aatttcatcaaacccaattttccagagaagatcaggtacctggtcttgaatgttgctgac
atatacactgagaatattattcaatactttccacaggtaaaggcatttatagaagacagt
tttgcaagaaatggaaaagtattggttcatggaaatgctggaatgtctcgcagtgcatct
cttgtgatagcttacatcatggaaaaatatggcctatcttacagagatgcatttgtgtat
gttcaacagaagagattttgtattcatcctaatgaaggatttgttcaacaattacatgag
tatgagcctatgtacagggccaaattaagttttgaacacagttataccccattagagagt
ggaatgttaaaacgcaagttcacagaggatcctgagccctcacatgatgacagcttcttt
attggaagttggcatccagctgactggccacagctctggctagcagtgtcttccctgtcc
ctgggggtccgtacagcaaacagcccttag

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