Magallana angulata (Portugese oyster): 128176376
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Entry
128176376 CDS
T09348
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128176376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128176376
03021 Transcription machinery [BR:
canu03021
]
128176376
Transcription factors [BR:
canu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
128176376
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128176376
RNA polymerase III system
TFIIIB
128176376
RNA polymerase I system
SL1/TIF-1B
128176376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DSPc
DacZ_T
PTP-SAK
Y_phosphatase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
128176376
NCBI-ProteinID:
XP_052698613
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All DBs
Position
3:complement(4293894..4312100)
Genome browser
AA seq
469 aa
AA seq
DB search
MDGSGQNFASFGSGLTPQHQQSPMMSPAALSSFSLGATPNPVMPPSNASLYPPQTPLAPM
TPGVPVTPGGPPITPGGPMTPATPASEGGAGMVPLRPQLQNIVCTVNLGCKLDLKKIALH
ARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDQAKLAARKYARIVQKLGF
AAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFV
SGKVVLTGAKDWEYAMRREMQEIVPNLYLGPYATANKNKLGYLESIGITDIICVRHTAEA
NFIKPNFPEKIRYLVLNVADIYTENIIQYFPQVKAFIEDSFARNGKVLVHGNAGMSRSAS
LVIAYIMEKYGLSYRDAFVYVQQKRFCIHPNEGFVQQLHEYEPMYRAKLSFEHSYTPLES
GMLKRKFTEDPEPSHDDSFFIGSWHPADWPQLWLAVSSLSLGVRTANSP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggacggatcgggacaaaactttgcatcatttgggagcggtcttaccccccagcatcaa
caaagtcccatgatgtcaccagcagctcttagcagtttttctttgggagccactccaaat
cctgtaatgccaccatccaatgcaagtttataccctccacaaactccattggcgcccatg
actcctggtgttccagtcacccctgggggacccccaataactccaggaggacccatgaca
ccagcaaccccagcctcagaaggtggtgctggaatggttccactcaggccacagttgcag
aatattgtttgtactgtaaatcttgggtgtaagttggatctaaaaaagattgctcttcat
gccagaaatgccgagtataaccccaagcgatttgctgctgtcatcatgaggatccgtgaa
ccaaggacaacagctcttatatttagttcaggaaaaatggtgtgcactggagccaagagt
gaagatcaggcaaagttagcagcaaggaagtatgcaaggattgtccagaaattagggttc
gcagcaaaattcctggattttaagattcagaacatggtaggaagctgtgatgttaaattt
ccgatcaggttagagggattggtcttgacccatggccagttctccagctacgagcctgaa
ttgttccctggcctgatttacagaatggtgaagcctcgtatcgttttgcttatttttgtc
tcaggaaaagtcgtacttacaggagccaaagattgggagtatgcaatgaggagagaaatg
caggagatagtgcctaacctgtatcttggaccctatgcaacagccaacaaaaataagtta
ggttatttagagtcaataggaataactgatatcatctgtgtcagacatactgccgaagca
aatttcatcaaacccaattttccagagaagatcaggtacctggtcttgaatgttgctgac
atatacactgagaatattattcaatactttccacaggtaaaggcatttatagaagacagt
tttgcaagaaatggaaaagtattggttcatggaaatgctggaatgtctcgcagtgcatct
cttgtgatagcttacatcatggaaaaatatggcctatcttacagagatgcatttgtgtat
gttcaacagaagagattttgtattcatcctaatgaaggatttgttcaacaattacatgag
tatgagcctatgtacagggccaaattaagttttgaacacagttataccccattagagagt
ggaatgttaaaacgcaagttcacagaggatcctgagccctcacatgatgacagcttcttt
attggaagttggcatccagctgactggccacagctctggctagcagtgtcttccctgtcc
ctgggggtccgtacagcaaacagcccttag
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