KEGG   Magallana angulata (Portugese oyster): 128176514
Entry
128176514         CDS       T09348                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
canu  Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:canu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:canu04121]
    128176514
   03400 DNA repair and recombination proteins [BR:canu03400]
    128176514
Enzymes [BR:canu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128176514
Ubiquitin system [BR:canu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128176514
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    128176514
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 DEAD DZR Zn_ribbon_Nudix RING_XB3-XBAT31 Baculo_IE-1 zf-Nse Zn_Ribbon_1 AAA_34 Prok-RING_4 zf-ANAPC11 zf-RING_6
Other DBs
NCBI-GeneID: 128176514
NCBI-ProteinID: XP_052698876
LinkDB
Position
3:49159076..49190338
AA seq 1363 aa
MARTKQTMRNNSKKSNFQRATFQPARQRKRPRKPKREPLWMTEREARSPWFYRQYQYDPW
NNSDSESDSEGEMGHDDLDDEVLFGSLRGNIVGIRYYSGTVNNNEMVALEREPHNKYDRN
AIKVVNVVRQQVGHIKRELASALAPIMDSGWVRLEGIVPFGSQNQFSMPVDISLWGKPEH
KQGTITRLERSGILMKVAPDPVGGAIGGPSTSMMYGVVSNKRTFLTPSEVRNELDKLFES
LNEGDKTTTVEPAEAISSTMYKHQKQALHWMIKRENGDQLPPFWENKNGQYFNSVTIFTT
KTKPRSVCGGILADDMGLGKTLQTIALILTNFKDGKPLAVPVPGKIRQSKILRMQQKAQR
MEEYKSSPCKSRKSFVIKGDPNEMIDEGKPCVGQKRKTLGKLLRYNNAVDNLSSDEEEIE
DLVEEEEEEEDCEDVNDDKIMLKKDDPEFKLSKDTLKQEKIVSPIASRRPRRSVKKPTRY
TYSSDDEDQERVGSPMKRVKIDHEEKENLQKVSVPRKGHQRGKGKGKQLCKPVTQACEVN
KLIADTIEIDCANVDDVCKSLQDQRTEKETLVTERGDSLVEPKLDSVSSENKDSACNTEP
VGIVGNLESTDVELIVQNSESDAVSCPKWMTEGVGCGQEIHKGHKFCTMCGWKINTNIFK
NGAKMCHNKMEEQKFCENIVYPPQKFCSNCGHRLSFGVQAPVNVSNTKVQSSSGEILTAE
GNKQDVTKESISAMENSMPSTSSSNLNPYARPFIPGAKDIIPPKQMTSATDDLPDPALPS
LPADSTSSGPCTVEELPDIPDPSCSTPGTSKCGKFSGRTPTTGARATLIVCPLSVMSNWL
DQLEEHIHENIHLDIYTYYGPSRIRDPAVLAKQDVVLTTYSTLSFDAKNDQALQKVKWLR
VVLDEGHAIRNPNAQQTKAIYSLQAERKWVLTGTPIQNSIKDLWSLVNFLQISPFTDRQW
WTRAIERPLEQGNESAIKRVQHLMGAIAMRRTKKQMVDGKPIVELPERNVFVEHVKLSEE
ERSLYDAMQNEGKIIVSRYFQQGTLLHHYGDVLAILMRLRQMCCHPLLVAKAAAAMKDIM
NEAEASGGMNDALRQKLVDTLMMVLSSGSDEECAICLDSLKQPIITCCAHVFCRGCIEAV
IKNETPTARCPLCRGDVSIDSLTEVPAEQTRQPSVAEAATEGEWKSSTKVDALMNGLVKL
REENPRIKSLVVSQFTSLLTLLEIPLKALGFRFVRLDGTMSMKQRLRSVEEFSNPAPGSP
TIMLLSLKAGGVGINLVAASRVFLMDPAWNPASEEQCFDRCHRLGQTKDVIITKFVVEDS
VEERMMALQDQKRKLMQGAFGQKQTADDKRTNRIRDIKTLMDL
NT seq 4092 nt   +upstreamnt  +downstreamnt
atggcaagaacaaagcagacaatgagaaataactcaaaaaagagtaattttcaaagggca
acatttcagccagcccgccagagaaagcgccccagaaaaccgaaaagggagccattatgg
atgacagagagagaagcgaggtccccgtggttttatcgacagtatcagtatgatccatgg
aacaactcagattcagagtccgactcggaaggtgaaatgggacatgatgatttggatgat
gaagttttatttgggagtctcaggggaaacattgttggaattcgctattactctggaact
gtcaacaacaatgaaatggttgccttggagagagaaccacataacaagtatgacaggaat
gccatcaaagtggtcaatgttgtacgtcaacaagtcggacatatcaagcgggaactggcc
tccgctctagctcccatcatggacagtggctgggtcagacttgagggaatagttccattt
gggagccagaaccagtttagcatgccggtggacatcagcctgtggggtaaaccagaacac
aagcagggcaccattacaagactagagcggtcaggcatcctgatgaaggttgcccccgac
cccgtgggtggggctattgggggacccagcaccagtatgatgtatggagtggtgtccaac
aagagaacttttctaacaccatcagaggttagaaatgaacttgacaagttgtttgagagt
cttaatgagggtgacaaaactactacagtggaacctgcagaggcaatatctagtacaatg
tacaagcaccagaagcaggctctccattggatgatcaagagagagaacggtgaccagttg
ccgccattctgggagaacaagaacggacagtacttcaactcggtgaccatcttcaccacc
aagacaaagccaaggagtgtctgtggaggaattcttgctgatgacatgggtcttgggaaa
accctccaaacaattgctctgattttgaccaacttcaaggatggaaagcctctggctgtg
ccagtcccagggaaaatccgacagtccaagatattacgaatgcaacagaaagctcaaaga
atggaggaatacaagagcagtccatgtaagtctcgaaagtcatttgtcatcaaaggagac
cccaacgagatgattgatgaaggcaagccgtgtgttggacagaagaggaagaccctgggg
aaactactgagatataacaacgcagtggacaacctttcctcggacgaggaggaaattgag
gaccttgtggaggaagaggaggaggaagaggactgtgaggatgtgaatgatgataaaatc
atgttgaagaaagatgaccctgaattcaagctctccaaagacacgttaaaacaggagaaa
attgtctcacccattgccagtcggagaccaagaaggagtgtaaagaaacccacaagatac
acctacagcagtgatgatgaggaccaggagagagtcggcagtcctatgaaaagagttaag
atagatcatgaagagaaagaaaacttgcagaaggtctctgtgccaaggaaaggtcatcag
aggggcaaaggaaaagggaaacaactctgtaagcctgtgacacaggcttgtgaagtgaac
aagctgattgctgacactattgagatagactgtgctaatgttgatgatgtgtgtaagagt
ctacaggatcagagaacagaaaaagagaccctggtcactgaaagaggggacagtcttgtg
gaacctaaacttgactcagtcagttcagaaaacaaagacagtgcatgtaacacagaacca
gtaggaattgtagggaatttagaaagcacagatgttgaacttatagtgcagaacagtgaa
agtgatgctgtatcttgtcctaagtggatgacagaaggagtggggtgtggacaagagatc
cacaaggggcacaagttctgcaccatgtgtggatggaagatcaacaccaatatctttaaa
aatggtgccaaaatgtgtcacaacaaaatggaggaacaaaaattttgtgaaaatattgtt
tatcctccccagaagttttgttctaactgtggacaccggctgtcatttggagtgcaagcg
ccggttaatgttagcaatacaaaagtgcaatcctcatcaggggagatactgacagcagaa
ggaaataaacaagatgtgacaaaagagtcgataagtgcaatggaaaacagcatgccaagt
acaagttcatcaaatctgaatccttatgcaagaccattcatacctggagctaaagacata
ataccaccaaaacagatgacatctgcaacagatgaccttcctgatccagctctacccagt
ctcccagcagatagtacatcgtcggggccgtgcactgtggaagaactccctgatatacct
gatccctcttgctctacgccaggcaccagtaaatgtgggaagttttcaggacgaacacca
acaacgggggcccgagccacactgatagtatgtcctctgtcagtgatgagcaactggctg
gatcagttagaggagcacatacatgagaacattcacctggacatctacacctactacggc
cccagcagaatcagggaccccgctgtactggccaagcaagacgtggtcctcaccacatac
tccacactctcctttgatgccaagaatgatcaagctttgcagaaagtgaagtggttaagg
gtcgttctggatgagggccatgccatcaggaaccctaacgctcagcaaaccaaggccatc
tactccctgcaggcagagcgcaagtgggtgctaactggaacgcccatccagaactccatc
aaggatctgtggtcgctggtcaacttcctgcagatcagtcccttcacagacagacaatgg
tggaccagggccatagaacggccgctagagcagggcaatgagagtgctatcaagcgtgtt
cagcatttgatgggtgccatcgctatgaggagaacaaagaaacagatggttgatgggaag
cctattgtagaactccctgagaggaatgtttttgtagaacatgttaaactgtcagaggaa
gaaaggtctctgtacgacgccatgcagaacgaaggcaaaatcattgtcagcagatatttc
cagcaaggcactctgcttcatcactatggagatgtccttgccattctgatgagattaaga
cagatgtgttgtcatccactcttggttgctaaggcagcggcggccatgaaagacataatg
aatgaagctgaggccagtgggggtatgaatgacgccctgagacagaagctggtggacacc
ctgatgatggtgctaagctcgggctctgacgaggagtgtgccatctgtctggactccctg
aagcagcccatcattacctgttgcgcccatgtcttctgtcgaggctgtatcgaggccgtc
ataaaaaacgaaacgcctactgccaggtgtcctctgtgtcggggggatgtatccatagac
tctcttaccgaggttccggcggaacaaactcgtcagccgagcgtggctgaggccgccact
gagggagagtggaagtccagcaccaaggtggatgctctgatgaatggattggtcaagctg
agagaggagaaccctcgtatcaagagtctcgtcgtgtctcagttcacaagtctactcact
ctccttgaaattcctctcaaggctctgggtttccgcttcgtgaggttggacgggactatg
tccatgaagcagaggctgcggtcagtggaggagttctccaaccccgccccgggatccccc
accattatgctgctgtccctcaaggccggcggggtggggatcaatctggtggctgcctcc
agggttttcctgatggatccagcttggaaccctgcctctgaggagcagtgctttgacagg
tgtcaccgcctgggacagaccaaggacgttatcatcaccaagtttgtggtcgaggactcg
gtagaagagaggatgatggctctacaagaccagaaaaggaagctgatgcagggagccttt
ggtcagaaacagacggcggacgataaacggaccaacagaatccgtgacatcaaaacactg
atggatctgtga

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