Magallana angulata (Portugese oyster): 128177082
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Entry
128177082 CDS
T09348
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03420
Nucleotide excision repair
canu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128177082
09124 Replication and repair
03420 Nucleotide excision repair
128177082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128177082
03400 DNA repair and recombination proteins [BR:
canu03400
]
128177082
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
128177082
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128177082
TCR (transcription coupled repair) factors
Cul4-CSA complex
128177082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
128177082
NCBI-ProteinID:
XP_052699578
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All DBs
Position
1:complement(37126991..37136978)
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AA seq
1139 aa
AA seq
DB search
MAHNYVVTAHKPTAVNACVTGNFTSPDDLNLIIARNTRMEIYVVTPEGLRPVKEVGVYGR
IAVMELFRPPGESKDLMFLLTQRYNAMILECNQNGENIDIITRAHGNVQDKIGRASETGI
IGIIDPLCRVIGLRLYDGLFKVIPLERDNKELKAFNIRLEELTVIDIQFLHGCTTPTLIL
IHQDQHGRHVKTYEISLRDKEFQKGPWKQDNVETEACMLIAVPEPFGGALIIGQESITYH
KGDNFIPIAPPAIKQSTLTCYGKVDANGSRYLLGDMMGRLFMLMLEKEEKMDSTVTVKDL
KVELLGETTIAECITYLDNAVVYIGSRLGDSQLVKLNVEPDENGSYVQEMERFTNLGPIL
DMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWSLRVNSPEY
DNMIVLSFVGQTRVLMLNGEEVEETELSGFESDQQTFLCANVVHNQLLQITPQSVRLISC
DNQKLLKEWKHPGGKNISLASSNTCQVVACVGSELYYLELLQGDIKQVSTSTMEHEVACV
DLTPLREGEEKSHLCAIGLWTDISARVLSLPDFNSLHVEMLGGEIIPRSILMTTFEGIHY
LLCALGDGSLFYFNFNIDTGYFTEKRKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTLTIGTIDEIQKLHIRTIPLGESP
RRIAYQESSQTFGVISMRMDLQDSNGLNPTRPSASTHAAMMSSSSSGKVTMGTSTMGEHS
AGDEVEVHSLLIIDQHTFEVLHSHQLMPNEFATSLISARLGEDPCNYYIVGTALVHPEEA
EPKQGRIVIFHFHEGKLNQIAEKEIKGAAYTLVEFNGKLLASINSTVRLFEWTTDKELRL
ECNYFNSIVALYLKTKGDFILVGDLMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILD
DDNFLGAENSFNLFTCQKDSASTTDEDRQNLQEVGMFHLGEFVNVFRHGSLVMQHSGETS
TPTQGSVLYGTVNGAVGLVTQVPQEFYSFLQDIQSRLAKVIKSVGKIEHSFWRSFHTERK
TEACEGFIDGDLIESFLDLNRDKMQETVKGLQIDDGSGMKREATVDDLVKTIEELTRIH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaattatgttgtcacggcacataagccgactgctgttaatgcgtgtgttaca
ggtaatttcacatcaccagatgacttaaatttgataattgcaagaaatactcgaatggaa
atatatgttgtgacaccagaaggtctacgtcctgtgaaggaagtcggtgtatatggtaga
attgcagtgatggagttatttagaccgccaggagagtccaaagatctgatgtttttactg
acgcagagatataatgccatgattttagaatgtaatcaaaatggagaaaacattgatatc
atcacaagagcacatggcaatgtgcaggataagattggtcgagcgtccgagactggaatt
attggtatcattgatccactgtgtcgtgtaattggactccgattgtatgatggactcttc
aaagttattccccttgaaagagacaataaagaactaaaggcttttaatataagactagaa
gagctgactgttattgatatccagtttcttcatggctgtaccacaccaaccctcatccta
attcaccaggatcaacatggtcgccacgtcaaaacatacgagatttctcttcgagacaaa
gaatttcagaaaggtccatggaaacaggataacgtggaaacagaagcctgcatgcttatt
gctgtacctgagccatttggtggagctctgatcattggacaggaatctattacataccac
aagggagataactttattccaattgcccctcctgccattaagcaaagtacattaacatgc
tacggcaaggtggatgcaaatggttcccgttatttactgggagacatgatgggccgactc
ttcatgctgatgttagagaaggaggagaagatggactccaccgtcactgtcaaagatctc
aaagttgaactcctcggggagacaacaatagcagagtgcattacctacttggacaatgct
gtggtgtacattggatcaaggctaggagattcacagcttgtcaagctcaatgtggagcca
gatgaaaatggatcatatgtgcaggaaatggagagattcacaaatctaggtcctattctg
gacatgtgtgttgttgaccttgagagacaaggtcaaggacagcttgttacttgttctggt
gcatacaaagaaggctctttgaggataatacgcaatggtatcggaattcatgaacatgcc
agtattgatttaccaggaatcaaaggaatctggtcccttagagtgaactcccccgagtat
gacaacatgatagttctatcttttgtgggacaaacaagagtgttaatgctgaatggggaa
gaggttgaggaaacggagctgtctgggtttgaatcagatcaacagaccttcctctgtgcc
aatgttgtccacaaccagctccttcagataactcctcagtcagtccgactgattagctgt
gataaccagaaactcctgaaggaatggaagcaccctgggggtaagaacatcagtctggcc
agcagtaacacctgccaggtggtcgcctgtgtgggcagcgagctgtactacctggagctg
ctgcaaggggacatcaagcaagtcagcacaagcacaatggagcatgaggtggcctgtgtg
gacctgacccccctccgtgagggagaggaaaagtcccacctgtgtgctattggtctgtgg
acggacatctcggccagagttctcagtctcccagacttcaacagtcttcacgtggaaatg
ctgggtggagaaattataccaagatctattctgatgacaacttttgaaggcatccattac
ttactgtgtgcactaggagatggttccttgttctactttaattttaacattgacacaggt
tatttcacagagaagaggaaagtaaccctgggtacacagccaacagtgttacggacattt
agatctctctccacaactaatgtgtttgcgtgctcagatcgaccgactgttatatattcc
agcaatcacaaacttgttttctccaatgtcaacttgaaagaggtcaatcacatgtgtccg
ttgaattcagagggatatcccgacagcttggcgttagctaatgatggcactcttaccatt
ggaacaatagatgaaattcagaaattacacatcagaacaattcccttaggagaatcacca
aggcgcatagcttatcaggagtcgtcccagacgtttggtgttatttccatgcggatggac
ttacaggatagtaacgggctgaacccaacccgccctagtgccagcacccacgccgccatg
atgagctccagctccagtgggaaggtcaccatgggaaccagcaccatgggagagcactct
gccggtgatgaagtggaggtccattctctgctgatcattgatcaacatacattcgaagtg
ctacactctcatcagctaatgccaaatgagttcgccactagtcttatctcagccagactc
ggggaggacccctgtaactactacattgtggggacagccctagtccacccagaggaggca
gaacccaagcaagggaggatcgtcatcttccacttccatgagggtaaattaaatcaaata
gctgaaaaagaaatcaaaggtgctgcatacacactggtggagttcaatggaaaattatta
gccagcatcaacagcactgtgcggttgtttgaatggacaacagataaggagttaagacta
gagtgcaattatttcaatagtattgtggcattatatctgaaaaccaaaggagacttcatt
ttagtgggggacctaatgaggtcgatcacgctgttgctgtacaagccaatggagggaact
tttgaagagattgcaagggactgcaatcctaattggaccacagcagtcgagattttggat
gatgataatttccttggagcagaaaattcttttaatttattcacatgccagaaagacagt
gcttctacaacggatgaggacagacaaaatcttcaggaggttggaatgtttcatcttggt
gaatttgtcaatgtatttagacatggttctttagtgatgcaacattctggagagactagc
actcccacccaagggtctgtactgtatggtacggtcaatggggctgtaggtttggtgacc
caggtcccccaagagttttactccttcctacaggacattcagtcacgtctagccaaggtg
atcaagagtgtcggcaagattgagcattcattctggcgatccttccacacagaaagaaaa
acagaggcctgtgaagggtttattgatggagatttgattgagagcttcctagatctgaac
agagataaaatgcaggaaactgtgaaaggtctacagatcgacgatggaagtggcatgaaa
agggaagctactgttgatgatttggtgaaaaccatagaagaattaacacgcattcattaa
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