Magallana angulata (Portugese oyster): 128177574
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Entry
128177574 CDS
T09348
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128177574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128177574
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128177574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
UTP15_C
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
DSE1_N
PAC11
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_ACSF4
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_NWD2_C
Beta-prop_EIPR1
ASA1
Beta-prop_DCAF12
WD40_like
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_At4g14310
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_LRRK2
Utp8_C
Motif
Other DBs
NCBI-GeneID:
128177574
NCBI-ProteinID:
XP_052700286
LinkDB
All DBs
Position
3:complement(44801107..44837227)
Genome browser
AA seq
519 aa
AA seq
DB search
MAAPFKKTSARHLQPRVDVKVTPDTLYWKNLDVPVTKKEYGAITDIDFCPTAPHYFAVTN
STRVQVYSPTSLQIHKTISRFKEVAYSGSFRSDGKLLVAGGDEGSVRLFDVDSKSLLRLF
KGHSGAIHVTKFLTDKTRIFSGSDDNSVSVWDIPSESQLLSYREHQDYVRCGIASASSTD
LILTGSYDHTVKLFDTRINDSVMTFQHGHPVESVLMFPNGGICLSAGGNYIKVWDLLQGG
RLLSTLCHHHKTVTSLAFCNNFTRILSGSVDRHIKIFDISTYKVVHTLDLPGTVLSAAVS
PDDDILVVGMAEGLLSIQKRKTPKEPTSKNKQTSRYNATGKTYQPQKTDFIVHHKRKEQL
ERYDKYFKKFEFTKALDAAMKKGVSMPSPEVTVRVLQELMKKGAIKAALACRSDLSVGYI
IQFIKRNISKPSFQPVLLDVADLLLDLYAEQVGQSPVMDCQLTELRETVEQEVNYMTELS
EVMGMLDTVFASAAMKTSTTSSETVPVMTPSAVAQAADI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccttcaagaaaacttcggcacggcatttacaaccacgtgtagatgtgaaa
gtcaccccagatacgttatactggaaaaatttagatgttcctgtgacaaagaaagagtat
ggtgctataacagacattgatttctgtcccactgcgccacattattttgctgtgaccaat
tccacaagggtacaagtttacagccctacctccctgcagattcacaaaaccatcagtcgg
ttcaaagaggtggcatactctggcagtttccgtagcgatggtaaactgttggttgccggg
ggagatgaggggtctgtccgactttttgatgtggacagtaaatcattactgaggctgttt
aaaggtcacagtggagctatccatgttacgaagtttttgactgacaaaactcgaattttc
tctggttccgatgacaacagtgtgtcggtgtgggacattccaagtgaaagtcagctttta
tcatacagagagcaccaggactatgtccgttgtggcattgctagtgcctccagcacagac
cttattttgacaggctcctatgaccacactgtaaagctgttcgatacccggattaatgac
tccgtgatgacgtttcaacatggccacccggtggagagtgtcctgatgttcccgaatggc
ggaatctgtctgtctgcaggtggcaattacattaaagtctgggatcttttgcaaggaggg
cgtctactttcaacattatgtcatcaccacaaaactgtgacgtcacttgccttctgcaat
aattttacgcgaattctgtccggatcggtagacagacacatcaagatttttgacatcagt
acctacaaggttgtgcacactctggacctgcctggtacagttcttagcgctgcagtctca
ccggacgatgacatcctagttgttggaatggcagagggattgttgtccatacagaaaagg
aaaacgccaaaagaaccgaccagtaaaaacaagcagacctccagatacaacgcaacaggg
aagacttaccaaccccagaagaccgactttattgttcatcacaaacggaaagaacaactt
gaaagatatgacaaatacttcaagaaatttgaatttaccaaagctttagacgctgccatg
aagaaaggtgtaagtatgccatcaccagaggtcacagttcgagttcttcaagaactaatg
aaaaaaggagcaatcaaagctgccctagcctgtagaagcgacctctctgttggctacatc
atacaattcatcaaaagaaacattagcaaaccatcatttcaaccagtgcttctggatgtc
gctgatttattactagatctgtacgccgaacaggtgggtcagagtcctgtgatggactgt
cagctgaccgagctcagggagacggtggaacaggaagtgaactatatgacagaactaagt
gaggttatgggcatgctcgacacggtgtttgcttcggcagccatgaaaacgagcacaacg
tcatcagaaactgtgcctgtaatgacgccatctgctgtggcacaagcagctgatatttaa
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