Magallana angulata (Portugese oyster): 128177650
Help
Entry
128177650 CDS
T09348
Name
(RefSeq) deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
canu01002
]
128177650
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128177650
Enzymes [BR:
canu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128177650
Peptidases and inhibitors [BR:
canu01002
]
Cysteine peptidases
Family C64
128177650
Ubiquitin system [BR:
canu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
128177650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
DUF2756
Motif
Other DBs
NCBI-GeneID:
128177650
NCBI-ProteinID:
XP_052700412
LinkDB
All DBs
Position
1:41183323..41218679
Genome browser
AA seq
1195 aa
AA seq
DB search
MRKSSSGSPDSYKILYGTCPDEQCKAKLYFPSYDKSIECTNCGQRHEKSAIKNVAEVTNP
KVALHNILKNILLGNVKPKKGADNVKVLGLSNYVCKIVSPILTKYGMDKNTGSAKLLSEL
GQPAVLDCGKILGDRAFLIEEENLDIIGYGKDRTGSAHYLSDTLKVIRIANDNETRLVPI
HADGDGHCLVHAVSRALVGRELFWHGLRVNLMHHFQSKLTTYKDLFRDFIDVDEWEAIIN
ECDPDFVPQDGEPLGLRNIHVFGLANVLRRPIILLDSISGIESSGDYSGVFLPGLLPPNE
CKGRDGVLNKPLCIAWSSMGRNHYIPLVGIKGKEQPLLPRDMIQRAWGLPSMQIDKYMDF
NENGSCVIGGNKCLSDKYIRTLVSAMEKVYMDKYGVHPQLVADTHQYLYRTLGMVGARME
EVLKTTREAIQRKTLYRCLTCEAIMEYQLHEEWFQKGGSLYNLAVKTHGKLKSDKKYSFP
QQGAVCSYDKDQDKLVPDPGRCKPSTCTYCQGENVRLVNGDGSVCYENGDRTNTPAVTSR
CMCGFKHFWDGKEYDNLPEIFPISMEWNGEVVTEKVVWFQYESDITLNSNVFEVAHKLVQ
KHFPGEFGSERLVQRVVDTILRHTAPKVKDKEGASTSVVSPYQDTEWSAEEPSKIILTGH
KQKTLHKEELTVSQKEKMVKKQIETQAPKQQQKKSQELAAAGSKSSPSKPKVETVQRKEL
SPVPMETDKSSSHKKIRVATSDGRQVMLSVEGQVNFDTLQNMIYKAVKVPPERQRIRIGF
PPKELKRPSDSDINEPIPLSHGDKISLEIIPLTHSLSESGAESSHKQEHRALKHSSSSPA
KSKQHWSSFEEDIHSNSFEPLLHSFHEHAGNTSNSLDAAVASLTIMATLKGRDLWTHVQT
MPHLFSVGGLFYKQVERDLGLVDGKHCTLPTLPGKVFRYNQPENRLELCMEPYGHFPIEP
DVENRAKETRPIFGSRSEGSFSAFSGAVGQEKSKQAAFTGQGHSLKSMPDIERMPEDIPE
NIHHHARHSHTLCNPYVHQESIAEEPEDQSVAEVEKTKGGGDRKAKHHRMGPGYSVIDHS
NVNRTNQSIQQFKDLAESIERTMHEEISKIDEEMEKLDEEEEEKKSRTSSVGSSHTPGYH
DDAKTTQDTSPSDTTDNMCSVTSEAMEVTGSEEGRKLPTMADDQVTEPGQTMDEQ
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcatcaagtggtagcccagattcctacaaaattttatatggaacatgccct
gatgaacaatgcaaagcaaagctttattttccatcttacgacaaaagtatcgagtgcacc
aattgtggacaaagacatgaaaaatcagccataaaaaatgttgcagaggtaaccaatcca
aaagtggcgcttcacaacattctgaaaaacattcttcttggaaatgtgaaacctaaaaaa
ggtgcagacaatgtgaaagtgctgggtctctcaaattatgtgtgtaaaattgtttcacca
attttgacaaaatatggcatggataagaacaccggttctgccaaactgttgtcagagctt
ggccagccagccgtcttggactgcggaaagatcttgggtgatagggctttccttatagag
gaagagaatctggatataattggatatgggaaggaccgaacaggcagtgctcactacctg
tccgacactctcaaagtcattagaatagccaatgataatgaaactagactggtcccaatt
catgctgatggagatggtcattgccttgtgcatgctgtgtcaagagctctggttggacgg
gaactgttttggcatggtctgagagtaaaccttatgcatcattttcagtcaaagctaacg
acatataaagatctttttcgtgattttattgatgtggacgaatgggaggccatcatcaat
gaatgtgatcctgattttgtgccacaagatggagaaccccttggtttacgaaacattcat
gtatttggactggctaatgtactgagaaggccaatcattttattggattctatcagtgga
attgaaagttcaggcgattattcaggtgtgtttctgcctggcctgttgcctccaaatgaa
tgtaaggggagggatggagttctgaacaaaccactgtgtattgcctggagtagcatgggg
agaaaccactacataccactggttggaataaaagggaaggagcagcccctattgccccgt
gacatgatccagagggcatggggcttgccctccatgcagatcgacaagtacatggacttc
aacgagaatggcagctgtgtgatcggaggaaacaagtgtctgtcggataaatacataagg
accctggtatcagcaatggagaaggtttacatggacaagtatggagttcacccccagctt
gtggctgacactcaccagtatctctacagaacactaggtatggtgggagcccgaatggag
gaagttctaaaaaccaccagagaagccattcagaggaagactctgtatcggtgtctgact
tgtgaggcaattatggagtatcagcttcatgaagaatggttccagaaaggaggcagtctc
tataacctggctgtgaagactcatgggaaactaaagtcggacaaaaagtactcctttccc
caacaaggagctgtgtgtagttatgataaggatcaggataaacttgttcccgacccaggc
cgatgtaaacccagcacttgcacgtattgtcagggtgagaacgttcgtctggtgaatggg
gatggcagtgtctgttatgagaacggcgatagaaccaatactccagcagtgaccagtcga
tgcatgtgtggatttaaacatttctgggacggcaaggaatatgacaacctaccagaaatc
tttccaatttctatggaatggaatggagaagtagtgacagaaaaagttgtgtggtttcaa
tacgagtctgatatcacattgaacagcaatgtttttgaagtggctcataagctagtccag
aaacactttccaggagagtttggcagtgagcgactggtacagagagtggtagacaccata
ctgcgtcacacagccccaaaagtcaaggacaaggagggagccagcacctcagttgtgtcc
ccttatcaagacactgaatggtcagcagaggagccctcaaagatcatactgactgggcac
aagcaaaaaacactccataaggaggaactgacagttagtcagaaagagaaaatggtaaag
aagcaaatagagactcaggccccgaaacagcaacagaaaaaatcccaggaattggctgca
gctggaagcaaatcttctccttcaaagcccaaagttgagactgtacagagaaaagaatta
tcaccggttcccatggaaactgataaatcctctagtcacaagaaaatccgggtagccaca
tctgatggaagacaggttatgttgtctgtagaaggacaggtaaactttgataccctacag
aacatgatatacaaggcggtgaaggttccgccggagagacagagaattcggattgggttc
cctcccaaagagttaaagaggccctctgactcggacattaatgaaccaattccactctct
cacggagacaaaatatcccttgagattattccacttacacattctctctccgagtctgga
gcagagagttcccataaacaggaacacagagctttgaaacattcctcctcttcccccgcc
aaatccaagcagcactggagcagctttgaggaggatatccactccaattcctttgaacct
ctgcttcatagttttcatgagcatgcaggtaatactagtaacagcttggatgctgcagtt
gcctctctcacaataatggctaccttgaaaggtcgtgacctttggacccatgtacagacc
atgcctcatttgttttctgtgggtggattgttctacaaacaagtggagcgtgacttaggc
ctagtcgatggaaaacattgtactctaccaacacttcctggaaaggtattcagatataac
cagccagaaaatagactggaactttgtatggaaccatatggacatttccccattgaacca
gatgtggagaacagagctaaagaaacgagacccatatttggttctcgaagtgaagggtca
ttcagtgcattcagtggtgctgtgggacaggaaaaaagcaagcaggccgcattcacaggt
caaggacattccctaaaatcaatgcctgacattgaaagaatgccggaggacatcccagaa
aatattcatcaccatgctcggcactcccacactctgtgtaacccctacgtccaccaagag
tccattgctgaggagcccgaggatcagtctgtggccgaggtggagaaaaccaagggggga
ggggacaggaaggcaaaacatcacaggatgggacctggatacagtgtgattgaccactcc
aatgtaaacagaacaaaccagtccattcagcagtttaaggacttggccgagagcattgaa
agaacaatgcatgaggaaatttccaaaattgatgaagagatggaaaagcttgatgaagag
gaagaggagaagaaaagtagaacatctagtgtgggctccagccatacccctggttaccat
gacgatgctaagactacacaggacacgtccccaagtgatactacagacaatatgtgctct
gtcacttcagaggctatggaggtcacaggaagtgaggaagggagaaaactcccaacaatg
gccgacgatcaagtcacagaaccaggtcaaacaatggatgaacaatag
DBGET
integrated database retrieval system
