Magallana angulata (Portugese oyster): 128178594
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Entry
128178594 CDS
T09348
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04145
Phagosome
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128178594
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128178594
09142 Cell motility
04820 Cytoskeleton in muscle cells
128178594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128178594
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128178594
00536 Glycosaminoglycan binding proteins [BR:
canu00536
]
128178594
Membrane trafficking [BR:
canu04131
]
Endocytosis
Phagocytosis
Opsonins
128178594
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128178594
Exosomal proteins of colorectal cancer cells
128178594
Exosomal proteins of bladder cancer cells
128178594
Glycosaminoglycan binding proteins [BR:
canu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128178594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
128178594
NCBI-ProteinID:
XP_052701805
LinkDB
All DBs
Position
3:complement(58070775..58086245)
Genome browser
AA seq
1161 aa
AA seq
DB search
MNHKFVFLTCVLLGLIKVSLEFNKVEQDAVSSAFLMTSDVYLTGELFDEEERQGALVLFR
GEDEALGTKFIVYLEFTSHQVIIHVKSRDGKELQITFPCQPQLKEKDIRITLHFQDLLNS
PNKILLYINCKLVGNETSSIPIREGLVGTQRQQINPRFWFYIGSDVRPILQNQGCPVSIP
TQSPSSRNVHETIVRVVLPKKPKDKEMTSSKDKTDHSARTSGHQLPESHNKITLPDPKST
NTMDPAEARILSTSLQSLTSAVQQLQREITLQSQETRYLREVLSRCEMCRGGTPSTNTNR
PEVVATCQEKPCFNGVVCEDTSQGFRCGECPVGFTGDGITCAPKITCDNNPCYPGVSCTE
TEGGARCGQCPVGVTGHASRGGCQTVERCESDPCYPGVACIETTYGYTCGDCPEGMEGNG
TANGCEPIPVRCEHFPCFDGTTCLDTSDGYQCGACPQGMTGNGTKFGCRPIECADNTCFP
GVECVDSAAGFQCGSCPDGYKGNGSHCTDIDECRVFNPCSEMAECINLTPGFRCSNCPTG
FSGNDVFGVGVEGIESLKQVCEDVNECEDGKNGGCVDYSHCTNTLGSFVCGDCFEDYAGN
QTIGCQEMTTLCPDAITECHKHALCIMGTSGYDCQCRIGYAGNGKFCAKDSDLDGVPNIE
LRCKEFRCARDNCREVPNSGQEDVDLDGIGDACDEDIDGDGVGNDPDNCPYVANPEQEDS
DEGDKDRHGDACDNCPSVPNSDQEDTDKDGLGDACDPDIDDDGLLNEVDNCPKVDNPDQI
DSDEDGVGDLCDNCPFTANKVQNDSDHDFVGDVCDTNEDEDRDGVQDNYDNCEFLPNADQ
LDTDDDNLGNVCDDDDDDDGILDDDDNCPLVWNPDQTDSDGDEYGDACAEDSDGDGYADV
EDVCPEHKDIHSTDFRTFQTILLDPVGDSQIDPEWHIRNQGAEIIQTKNSDPGLAVSNTT
FSGVDFSGTFFVNTEVDDDYAGFIFSFQDSSKFYCIMWKKSAQTYWHPTPFRAVAEPGIQ
LKLVNSKTGPGEYLRNALWHTGDTEDEVKLLWKDPRNAGWKEKTAYRLELIHRPDIGLIR
MLLFEETNLVADSGNVYDATLRGGKLGVFSFSQEGVIWSNLVYRCNDYVPSGLLREGAEP
LEPMDGFLEDSGLHEFVRRRR
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaccataagttcgtatttttaacctgtgttcttttgggattaatcaaagtttctttg
gaatttaataaagttgaacaagatgccgtaagttcggcgtttctgatgacgtcagatgtc
tacctgacgggggaactgttcgacgaggaggaacggcagggggcgctggttctgttccgg
ggtgaggacgaggctctggggacaaagtttatcgtatacctggagttcacgtcgcatcaa
gtaattatccatgtaaaatcccgagatggaaaggaacttcaaataacgttcccgtgtcaa
cctcagctaaaagagaaagatattcgaataacgcttcatttccaagatctgctcaactct
cccaataaaatcctactgtatattaattgtaaattggtgggcaacgaaaccagttctatc
cccattagagaggggctagtcggtactcaaagacagcaaatcaaccccagattttggttt
tatatcggaagtgacgtccgaccaattcttcagaaccagggctgtcctgtcagcataccg
acacagagcccttcttccaggaatgtccacgagaccatcgtccgagtggtgcttcccaaa
aaaccaaaggataaggaaatgacgtcttcaaaggacaaaacggaccactctgcgcggacg
tcagggcaccaacttccggaaagccataacaagataacgcttccggatcctaagtccaca
aacactatggatcctgccgaagcccgaattctttctacatctttacaatcgttgacttcc
gccgtacagcagttacaacgggagataaccctacagagtcaggagacgcgctatctccgt
gaggtgctgagccgctgtgagatgtgcagaggcggaactccttccaccaatacaaaccga
ccggaagtcgtggccacgtgtcaagagaagccctgttttaatggcgtggtgtgtgaggat
acgtcacagggcttccggtgtggagagtgtcctgttggttttactggagatggaatcacg
tgtgctccaaagatcacgtgtgacaacaacccatgttatccaggtgtttcgtgcacggaa
acggagggtggggcccggtgtggtcagtgtccagtaggggtcaccggtcacgcctcacgg
ggcggttgtcagaccgtggagcgctgcgagtccgatccttgttacccaggcgtcgcgtgc
atcgaaacgacctacggttacacgtgcggggactgtccagaggggatggagggtaacgga
acagccaatggctgtgaacctatccctgtacgctgcgaacatttcccatgctttgatggc
accacgtgtttggataccagtgatgggtaccaatgtggcgcatgcccacagggaatgacc
ggaaatgggaccaagtttggatgtcgtcctattgaatgtgcggacaatacttgttttccg
ggagtggagtgtgtggattctgccgcgggattccagtgtggctcttgtccggacgggtac
aaaggaaacggaagtcactgcaccgatatcgacgagtgtagggtattcaacccctgcagt
gagatggcggaatgcatcaatcttactcccggattcaggtgttcgaactgtcctactgga
ttttcaggaaatgacgtatttggtgttggcgttgaaggcatagaatccttaaaacaggtt
tgcgaggacgttaacgagtgtgaggacgggaagaatggtggctgtgtggattactcccat
tgtaccaacacactgggctcctttgtatgcggggactgctttgaagattacgcggggaac
cagacgatcggctgtcaggaaatgaccacgttatgtccagacgccatcaccgagtgtcac
aaacacgcactgtgcattatgggaacttccggctatgactgtcagtgtagaattggttac
gcaggcaacgggaaattttgcgcaaaagacagtgacctggatggagttcctaacattgaa
cttcgttgtaaagaattccggtgtgcaagggataactgccgggaggttccgaacagcggc
caggaggacgtggacttagacgggatcggcgatgcttgtgatgaggacatagacggtgat
ggagtcggaaacgatccggataattgcccgtatgtggcaaacccggaacaggaagactcg
gacgagggggacaaagatcgccatggtgacgcgtgcgataactgtcctagtgtccccaac
tctgaccaagaggacacggacaaagacggcctaggggacgcctgtgacccggatattgat
gatgacggacttttgaatgaggtggacaactgtccaaaggtagacaaccccgaccagatt
gactctgacgaggacggggtgggagacctctgtgataactgtccgttcaccgccaacaaa
gtacagaatgactcggaccacgattttgtcggcgacgtctgtgacacgaatgaggacgag
gatcgtgacggtgtccaagacaactacgataactgtgagttcctgcccaacgccgaccaa
ctggacacagacgatgacaacctgggcaatgtttgtgatgacgacgatgatgacgatggt
atccttgatgatgacgacaactgccccctggtgtggaacccagaccagactgattcagat
ggcgatgagtacggagacgcatgcgcagaagacagtgacggggatggctatgctgacgta
gaggacgtctgtccggaacataaggacatccactccaccgacttccggacctttcagact
atcctgctggacccggtaggagattctcagattgatccagagtggcacatccgtaatcag
ggggcggagattatacaaacaaagaacagcgacccagggctggcagtcagtaataccact
ttctctggagtcgacttcagtggaacattctttgttaacaccgaggtagatgatgactat
gcagggttcatctttagtttccaggacagttctaaattctactgtatcatgtggaagaag
tctgcgcagacatactggcaccctactccattccgcgcagtcgcagaaccagggattcag
ctgaagcttgtgaattccaaaactgggcccggtgaatatctccgaaatgctttgtggcat
actggagacacagaggatgaagtaaagcttctctggaaagacccccgtaatgctggctgg
aaagagaagacagcgtacagactagaactcatccatcggccagacattggcctcatcagg
atgttgttatttgaggaaaccaatctggtggcggattccggaaacgtttatgatgccaca
ctgcgaggcgggaagctgggagtgtttagtttctcccaggagggcgtgatttggtccaac
ctggtctacagatgtaacgactacgttcctagtggtttactgagggagggggctgaaccc
ctggagcctatggacgggttcctggaggactcggggctgcacgagtttgtcaggagacgt
cgctag
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integrated database retrieval system
