Magallana angulata (Portugese oyster): 128178837
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Entry
128178837 CDS
T09348
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128178837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128178837
03036 Chromosome and associated proteins [BR:
canu03036
]
128178837
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128178837
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128178837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
128178837
NCBI-ProteinID:
XP_052702168
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Position
3:complement(3564803..3582925)
Genome browser
AA seq
1133 aa
AA seq
DB search
MFSPRTPSTRARSSPYTPSGVTPRAQNRRVSNIFTPKGRQSSLTQKGIPNRSLQTSQLIE
ETEGYRIEGFGTPLPVLITEALALADKHTEITVKIDQSGWAWLVGGRKLFVWRYKGGQST
RTVFCKELTLPPSDLAHNADRVCVIPSVTDNQSASCIAVSPEGIVRYWPNIAYEGSSTEI
SAELRGDECASVVNFEPFGCLLATTTSSLVLLLPMSGQNTLTCHPLKGSQGMFSGIGRRM
SSFIFGASTLQPSGAPLQAIVCGKCEDEDERSFFVLSGTQFQKWNISQPITEKLFYQIDV
ERMFREFLSKKVWNQDSRQLTQLKTWLLDMQPTQHGVVFLGAGVNMDVDLTVHFGLAFLD
TDINGTPNELESLMILEHQDVYSEDFEYSLQKHRLLLADPRSTTAYIYDREHVLFVPGPS
TEVINLQQPGGHILGAGTSDGVGVFFSGSMGLFSISTPQRQEISIMEEPVQDMTTADMSV
LTASHAKMQELSMSEDRTARLKSAFIATMRGNIAAAQATIEELFPLDEVSTDLDQTVVSL
DKDLVDDFPASDPRWAESRQDATSSTTSLIIINQLNDKLRAHEYVINFLKKMNLWEQLKQ
VTVRGTRMLTRHVMCEHAEKLQAAIALRQLHGEFSGIVDAAIKKVLEQRQDVNVSHNLTP
QDVFYREVSRIQEVMECLLEYQEEVLLADVTVTEILTVIISINTIVEEMLHKALQYHQTK
SAMYDCEAPEEENPEYIPWTSTGGDRGVRTLLLKQFNTTMEMVLPEVRDTEGLEKIYRQL
ASIADIILDGYVGQLESLKVKANRQQHYNELQRRYEQDRQQLIMPLMEGKQYELAASLAE
KYYDFEILIQLCEVSDNTDRIEKYLRQFSDKGFANYLYTWYMKEGKRGKLLALPISQQRE
LGKFLQKEDIKTLSWLHNIQTDNFSKAHLTLLELARMEQGSLSKKKTLLSLSKLAGLAAD
PDNGDIDSNILDINEEQELIAHQQQLPALVIENLKMEPDNMAVLSPVQLIELYISGTNID
ATEYDFKKALDLLQYIDKTDQTVDYESLRMHIWAQSILRDSWQQDDSVDVMEAIMNTVFF
KTVDLAYKEGVDVKTFMPGLKSILNCEELGDLKDSASFQYLIQAGYEHIGQVL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtccaagaactccgtctactcgggccaggtcgtcaccatatacgccatctgga
gtaaccccgcgtgcccagaacagacgagtatcaaatattttcactcccaaaggaaggcaa
tcatcgctcacacaaaagggcattcccaacaggtcattacaaacatctcagcttatcgag
gaaacagaaggatatcgcatcgaaggttttgggaccccactccctgttcttatcacagag
gcactggccttagcagacaaacacacagagataactgtgaagattgaccagtctgggtgg
gcgtggctggttggaggaaggaagctgtttgtctggaggtacaaaggaggacaaagtact
cggactgtcttttgtaaagaactaacgcttccaccgagtgatctggctcacaatgctgac
cgagtctgtgtcatcccgagtgtcactgacaatcagtctgcttcctgtattgctgtgtca
ccagagggcatcgttagatactggccgaacatcgcctatgaaggttcatccacagaaatc
agcgctgagctgcgaggagatgaatgtgcaagtgtggttaactttgagccttttgggtgt
ctgctggccaccacaacaagttccctagttctcctgttacctatgtcaggacagaataca
ctgacatgccatcccctgaaaggatcacaaggaatgttctcgggaattgggaggagaatg
tcttcttttatatttggggcttcaactcttcaaccatcaggggctccattacaagccatc
gtctgtgggaagtgtgaagatgaggatgagaggtcgttctttgtgttgtcagggacgcag
ttccagaagtggaatatatctcagcccattacagaaaagcttttctatcagatcgatgtc
gagagaatgttcagggaatttctttccaagaaggtttggaaccaggactcgcggcagctg
acccagttaaagacctggctgttagacatgcagcccacacaacatggagttgtctttctt
ggtgctggagtcaatatggatgttgatttgactgtacattttggactagctttcctagat
actgatatcaatggaacgcctaatgagttggaaagtcttatgattctggagcatcaggat
gtgtattcggaggactttgagtacagccttcagaagcacaggctgttactggccgatcct
aggtcaaccacagcctacatatacgacagggaacatgtactatttgtcccaggtccatct
acagaagtgatcaacttacaacagcctgggggtcatatccttggggcaggaaccagtgac
ggggtaggggtgttcttttctggcagtatgggactcttctccatcagcaccccacagcgc
caggaaatcagtataatggaggagcccgtacaggatatgacgacggcagacatgtcagtt
ctgacagccagtcatgccaaaatgcaggaactgtcgatgagtgaagacagaacagctcgt
ctgaagtcagcattcatcgccacaatgcgaggcaatattgctgctgcccaagccactatt
gaggagttatttcccctggatgaagtatccacagacttggatcagacagttgtctccctt
gataaggatctggtggatgatttcccggcttctgatccccgctgggccgagtctaggcaa
gatgccacaagtagtaccacctctctcatcatcatcaaccaactcaatgacaaactccga
gctcatgagtatgtcatcaactttctgaagaagatgaatctctgggagcagcttaagcaa
gtgacggtacgaggcacgaggatgctaacaagacatgtgatgtgtgaacacgcagagaaa
ctacaggcagccatagccctgcgacagttacatggggagttcagcgggattgtagatgct
gccattaagaaggtgctagagcagagacaggacgtcaatgtctcccacaacctgacccca
caggacgtgttttaccgggaggtgtcccggatacaggaagtgatggaatgtttgttggag
taccaggaggaagtcctgttggctgatgtcacggtaacagaaatcctgaccgtcatcata
tcgatcaacaccattgtagaggaaatgctacacaaagctttacagtatcatcagaccaag
tctgccatgtatgattgtgaggcaccggaggaagaaaacccagagtacattccctggacc
tcaacaggaggcgaccgaggggtcagaacactcctactgaagcagttcaatacgactatg
gagatggtccttcccgaagtccgcgacacagagggcctagaaaagatctacagacagctc
gcctccatcgctgacatcattctggatggctatgtaggtcagttggagtcgctgaaggtc
aaggccaaccgacagcagcactacaacgaactacagcggcgctacgaacaggacaggcag
caactcatcatgcccctcatggagggaaaacagtatgaattggctgcatctctggcggag
aagtactacgactttgagattctgatccagctgtgtgaggtgtcggacaacacagacagg
atagagaaatacctgagacagttctcggacaaaggttttgccaactatctctacacctgg
tatatgaaggaaggaaaaagaggaaagctgcttgctctaccaataagtcaacagagggag
ctagggaagtttctacagaaagaagatatcaaaaccctgagttggctccacaacatacag
acagacaacttctctaaggcgcatctgactctgttggagctggccagaatggagcaaggc
tctctatccaaaaagaagacactgttaagtctgagtaaattggcagggctggcagctgat
cctgataatggagatattgacagcaatatattggacatcaatgaagagcaggaattaatc
gcccaccagcagcagttacctgcccttgtcatagagaacctgaagatggaacctgacaac
atggcagttctctcccctgtccagttgattgagttgtacatctctggaacaaacatagat
gcaacagaatatgatttcaagaaagctttggatctccttcagtatatagacaagactgac
cagacagtggactatgagagtcttaggatgcacatctgggcccagtccatactcagagac
agctggcagcaggatgattcagtagatgtcatggaagctatcatgaacacagtattcttc
aaaacagtggacctagcttacaaagaaggagttgatgtaaagacatttatgccaggacta
aagagcatattgaattgtgaagaacttggtgacttgaaagattctgccagttttcagtat
ttgatccaagctggttatgaacacataggacaggtgctgtga
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