Magallana angulata (Portugese oyster): 128178850
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Entry
128178850 CDS
T09348
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128178850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128178850
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128178850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Phage_holin_3_6
Pet100
Motif
Other DBs
NCBI-GeneID:
128178850
NCBI-ProteinID:
XP_052702189
LinkDB
All DBs
Position
1:19117090..19129600
Genome browser
AA seq
426 aa
AA seq
DB search
MNCRVGLDWIGCVVQVVGALFFTIGFGTRYWATSDSSVNAGLFTTCDGSYCYDTHVFYHG
KSEKGAIMGAAVLQIFTLCGLYLVLLLMLLYMCGLFNERSVSRGAAFTAFATALFGFISV
IMFGSAMTSLQYSLNWSCAFVIIGLIVDIAAGICIYIGGQQWEEAQKVQRKRELFPPIKS
SRLDPRLEQRIQAANQKGSNKILKAGIISQARGSAYIEQNETKVMCAVYGPREVTKKEEF
SMKGQLTCEFKFATFSCRVRRQYQQDNEERDYSCQLQDALEPAVRMDKFPKAQVNVYVTV
LQNDGSPLAASLTCASVALANAGIEMYDLVVGCSARITPSEVFIDPTESEDYKAENDNEA
GNGSVTLGLMPSLNQVSAITSKGEVEFELLNKGTKQCVDVCQKLYPVLQQAVAKAVEDRL
SSDHVT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaattgccgggtggggttagactggatcggctgtgtggtgcaagtggtgggggccctc
tttttcacgattgggtttggcacccgatactgggccaccagcgacagttccgtgaacgct
ggacttttcaccacgtgtgacgggtcgtactgttacgacacccatgtcttctaccacgga
aagtcagagaagggggccattatgggggcggcggtgcttcagatcttcacgttatgtggt
ctctacctcgtccttctactgatgctgctttacatgtgtggtctgttcaacgagcgatca
gtgtccaggggtgcggcatttaccgcttttgcgacagctttgttcggatttatcagtgtc
atcatgtttggttcagccatgacgtcactacagtacagcctaaattggtcgtgtgctttt
gtgataatcggcctcattgtggacattgctgccggaatttgcatctacatcggcggccag
cagtgggaggaagcgcagaaagtacaacggaagagagaactatttccaccaatcaaatcc
tcgcgtcttgacccgcggctggagcagagaatacaagccgccaatcaaaaaggatctaat
aaaattctaaaggctgggatcataagtcaggcccgaggatcagcctacattgaacagaat
gagacaaaagttatgtgcgctgtatatggaccaagagaagtaacaaagaaggaggaattc
agcatgaagggtcagctgacctgtgagtttaagttcgcgaccttctcatgtcgagttcgt
cgccagtatcaacaggacaatgaggagagagattacagctgtcagttacaggatgccctg
gaacctgctgtccgtatggataaattccccaaagctcaagtgaatgtatatgtgactgtg
ttacaaaatgacggctctcctttagcagcctctttgacctgtgcctcagtggctctggct
aatgcagggatagagatgtacgacctggtggtgggatgctcagctagaattactccctct
gaagtgttcatagaccccacagaatcagaagattacaaagcagagaatgacaatgaggcg
gggaatggcagcgtgaccctggggctgatgccgtccctcaatcaggtgtcggccatcacc
tccaagggcgaagtggaatttgaattactaaataagggcaccaaacaatgtgttgatgtt
tgtcagaaactgtacccagttctccagcaggcagtggctaaagcagtggaggataggttg
tccagtgatcatgtgacgtga
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