Magallana angulata (Portugese oyster): 128178865
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Entry
128178865 CDS
T09348
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128178865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128178865
03036 Chromosome and associated proteins [BR:
canu03036
]
128178865
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128178865
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128178865
PBAF complex
128178865
GBAF(ncBAF) complex
128178865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
128178865
NCBI-ProteinID:
XP_052702213
LinkDB
All DBs
Position
1:4133789..4145125
Genome browser
AA seq
1075 aa
AA seq
DB search
MALTKKKDGSPNVKFFETVETIAQFDSVRTWLNKNYKKYMQADPPTNKNLASLVCQLLQF
MEDAFGKHVSNPALTKLPIRCFLDFKPGGALCHILAAVYKFKSDQGWRRFDFQSPSRMDR
NVEMFLQIEKTLVQNKCLILPTIYIMTDMDKVLLPKLKDIIKRHQGNITEDDEEATHIVH
VLPTHPPTEEEFIRPVMKRDRNAMIHWWYTPDSYDVWVPDVSPDLEIDNPQHSGALEVTA
KWLLDMEEYNEWMNEEDYLIEDEYETRKNKRPKNKVTVEEFIANQESDKREKRDKKSKRK
RSPSPTPAPSSEKKKRKSTRTPGGPGNSKKRLNKEDTDDDLTRDMEDPLPETNIQEVQLS
KQSSSNRSNKDSENQPIKGGTIIDMDEEATDKLIGEDRGDEEGADDDSKREKEDEDNVTE
QTHHIIIPSYSAWFDYNAIHSIERRALPEFFNGKNKSKTPEIYLAYRNFMLDTYRLNPTE
YLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDVDNRATAMGPPPTSHFHIMADTPS
GLQPVNPPKVNQPSAAKQIVSFDDKDKERDTSEGRELSDFSLRMDIYAKKALKDKGAATR
SREWTDQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPFLEESDFGHA
GQSGPLAYQPIPFSQTGNPIMSTVAFLASVVDPRVASAAAKSALEEFSKMKDEVPPALTD
AHVKMVEDANKEGKSLEAEFGLEKSGIAGTVPEKEEGMKAEEAVKEEEEKKEEEEKTEEK
KEEDKEEKKEEAMETDAQDNEEKREEEKPEKENEEEKAESKTESETKEETEEKKPEEEKE
TEEQIQEKVSKAVAKIPIKPDGNVATAAAAALASAAVKAKHLAAVEERKIKSLVALLVET
QMKKLEIKLRHFEELEAIMDRERDALEYQRQQLLQERQQFHMEQIKAAEHRARQIAMQQM
VTEQRQQNIGAGDQASGPGGPVMTANPSLAAAVGQSYPLSGSPMPPQGPQATQGSPAPPP
PASQPPAAQPVTGTAEGDLSAPASSNDVQAEPMSTDPPQTTVHPPQNMMGTSPVS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaccaaaaagaaagacggttcgccaaatgttaaattcttcgaaactgttgaa
acaatcgcacaatttgactccgtgagaacatggctgaacaaaaactacaaaaagtacatg
caagcagaccctcccacgaacaagaaccttgcaagtctggtgtgtcagctgcttcagttc
atggaagatgcgttcgggaaacatgtcagcaacccagcgctcacaaagcttcctataaga
tgtttcctggactttaagcctggtggtgcattatgccatatcttggccgctgtctacaaa
ttcaagagtgaccaggggtggagaaggtttgactttcagtccccatcaagaatggacagg
aatgtagaaatgttcctgcagatcgagaaaacccttgtccagaacaaatgtctgatcctg
cccaccatttatattatgactgatatggacaaggttcttctaccaaaactgaaagacatc
atcaaacgtcaccagggaaacataacagaggatgacgaggaggcgacacacattgtccac
gtccttcccacacacccacccacagaagaggagtttattcgtcctgtgatgaagcgtgac
cgtaacgcaatgattcattggtggtacactccagacagttacgacgtgtgggttcctgac
gtctccccagacctggagatcgacaaccctcagcacagcggggccctggaggtgaccgcg
aagtggctgctggacatggaggagtacaacgagtggatgaatgaggaggactacctcatc
gaggatgagtatgaaacaagaaaaaacaaacgtccaaagaacaaagtaacagtggaagag
tttatagccaaccaggaaagtgacaagagggagaagcgagacaaaaagagcaaacggaaa
agatccccctcccccacacccgccccatcctcggagaaaaagaaaagaaagagcacgcgg
actccaggaggacctgggaactctaagaagaggctaaacaaggaggacactgatgatgat
ctgacccgggacatggaagatcccctcccagagaccaacatacaggaggtgcaactctca
aagcagtcaagcagtaaccgtagtaacaaggacagtgagaaccagccaatcaaaggagga
acgatcatagacatggatgaggaggccaccgacaagctgattggtgaggatagaggggat
gaggaaggagcagacgatgactccaagcgagagaaagaggatgaggacaacgtgactgag
cagacccatcacatcatcatacccagctactcggcctggttcgactacaatgccattcac
tccattgagaggcgggccctgccggaattcttcaatggaaagaacaagtcgaaaacgcca
gagatatacctggcctacaggaactttatgctggacacatacagactaaaccccacagag
tacttgacaagcaccgcctgcagaagaaacttggccggggatgtgtgtgctataatgaga
gtccatgctttcctggagcagtggggcctgattaactatcaggtggatgtggacaacaga
gccaccgccatgggccccccacccacctctcacttccacatcatggctgacacaccctca
ggacttcaacccgtcaatccaccaaaagtcaaccagccctcagcagcaaaacagattgtt
agctttgatgacaaagacaaagagagggacacaagcgagggccgggagctctctgacttc
agtctacgcatggatatatacgccaagaaagcactaaaagacaagggagcagccacccgt
tctcgggaatggaccgaccaggagaccctgcttctgctggagggactggagatgtacaaa
gacgactggaacaaagtcagtgaacatgttggcagtcgaacccaggacgagtgtatcctt
cacttcctccgcttgcccattgaggacccattcctggaggagagtgactttggccatgca
ggtcagtcaggacccctggcgtaccaacccatccccttctcccagacaggaaaccccatt
atgtccactgtggcattcctggcctctgtcgttgatccaagagtcgccagtgcagcagct
aaatcagctctggaagagttttcaaagatgaaggacgaggtgccccctgcccttactgat
gctcatgtcaaaatggtggaggatgcaaacaaagagggcaagtctctggaggctgagttt
ggtctcgagaagagtggcattgcaggaactgtccccgagaaagaggaaggtatgaaagct
gaagaggcagtgaaagaagaggaggaaaagaaagaagaagaagaaaagacagaggaaaag
aaggaggaggacaaggaagaaaagaaagaggaagccatggaaacagatgcccaggacaat
gaagaaaagagagaggaggagaaaccagagaaagaaaatgaagaagaaaaggcagagagt
aagacagagtctgagaccaaagaggaaacagaggagaagaaaccagaggaagagaaggag
acagaggaacagatccaagagaaagtcagcaaggcagtggccaagatccccatcaagcca
gacggcaatgtggcaaccgctgctgcagcagcattagcatcagctgccgtgaaggccaag
cacttagcagctgtcgaggagaggaagataaagagtttagtggcattgctggttgagaca
caaatgaagaaactggagattaagttacgtcactttgaagagcttgaagccatcatggac
agggaaagagatgcattggagtaccaaagacagcaacttctacaagagaggcagcagttc
cacatggagcagataaaggctgcagaacaccgagccagacaaatagccatgcagcaaatg
gtgacagagcagagacagcagaatattggggcaggggaccaagcctcaggacctggaggc
ccagtaatgacagctaaccccagtttggcagcagctgtgggacagagctaccccctgtct
ggctccccaatgccccctcagggaccccaggccacccagggctctcctgcccctccccca
ccagcctcacagcccccggctgcccagccggtcactggcacagcagagggggacctctca
gcaccagcctcatccaatgatgtccaggccgagcctatgagtactgaccctccccagacc
actgtccaccccccacagaacatgatgggcaccagtcctgtctcctaa
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