Magallana angulata (Portugese oyster): 128178894
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Entry
128178894 CDS
T09348
Name
(RefSeq) recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03440
Homologous recombination
canu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128178894
03460 Fanconi anemia pathway
128178894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
canu03032
]
128178894
03400 DNA repair and recombination proteins [BR:
canu03400
]
128178894
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128178894
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128178894
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128178894
Bloom's syndrome complex (BTR)
128178894
FA (Fanconi anemia) pathway
128178894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
Helicase_C
HRDC
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
128178894
NCBI-ProteinID:
XP_052702244
LinkDB
All DBs
Position
3:15271528..15285372
Genome browser
AA seq
1400 aa
AA seq
DB search
MNGKAPRTFKFKKTLSLNKASNGVPALNELEAVQSSRISTNEPSDLDGDDEWLTTRPYSF
KEDSSNSAVNKESAVHSKIQNDNFIKKNAAGNRAFLASGKNKKPQQTSIMSFAQKKKPVA
AVAPHRSPVKAGDDCGAKRKRSPAKAIINILGDEDDDDFLDDFEIPASPVVNRRSLNSTS
SKKSVQETVKTSVSLNKTTEAERQIMDASGMTDLFGNSDSDEESFVATKRRRTLEEPTPS
HQSTVGGSAVLEQSTGTDPTTGVRTEQQTADIQQDPTDDSHSELFHTMEEVCDIVCKAST
ADLMSMFPQSYQRLQHLLALRKQLKDSCTVKDQHRAVTKRLSAPAGSLSSSAATNNVKLS
TSNSPQRLQYQTPSAVKAVSQQANMNSCTTSSPVLPQRSVLLSNTSTPATDRNFNSPSSG
QSKAFSFKKTTPIGFQSPIPCGESFFEEDAKLTQTHHSFISSFNKKSPSSSFKEPPVMNF
NQSTNSLLNQSDTTCANQSTSSSHFNQSAAVTYNSFSTVEAPSRTDFSFDYKLNNDSGVI
QTQSARDKFSSSVPDSEEEADVIDQFPDDLFSPDDFDSEFTEEVKTDSLPQLSSPRRQST
NQSFASPPSTKRREEEENKEFDGYNFKHSTLMTETFHQVFGLREFRKNQLKAINAALLGN
DCFILMPTGGGKSLCYQLPALVTGGVSIIISPLRALIQDQVTRLCSMDIAAGQLSSDMDQ
GQSDQIYRKMYYKNPEITLLYVTPEKISASGKLLGSLDNLHRRGKLTRFVIDEAHCVSQW
GHDFRPDYKKLGILKQKYPGVPMMALTATANMRVRKDIIYQLGMKNPKCFVQSFNRPNLK
FRVEPKKPSTLTADITKLIKEQFSGKCGIVYCLSRKECDTVAANLGKAGIQAVSYHAGLG
DSDRITIQEKWLNGHRCKVICATIAFGMGIDKPDVRFVIHYSLPKSVEGFYQEAGRAGRD
GQLAHCILYYTYQDVKRLRRIIEMDQAATFDSKRVHIDNLFRMVQYCENVADCRRSQLLN
YFGERDFNREECGNFRGAICDNCVSKESFSLRDVTDDVKAIVKCVQDLTVSGRRGNNYTL
IYFVDIFRGAKTGKICDAGHDKVALYGRGKNYSRADAERLLRKLVIDAILHEDLQITAAD
TTACYIKLGPKANDVMMGRQKVELQVQGSRKRTEVAKIGKEPVSQRENAIEECLCELLEM
AKTIAAEHGLRNYATVFPILTLRQLAEKTPLTVEEMTEKVDGLPKAKVNKYGAERFLDIT
KNYHLIMSNLQQEEVEADDSDVPEWESPYFVGESTTPSNQGRKRGSYKKRGFRGKKRGGG
SKSSAGKSWNTSDKGNKFSSYKSRGSTKKVTGNFKRGGSSSSRGGSSNSRGGFSGGGLGF
MPVPQPNRSFLSSGGGTFFG
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggaaagctcccagaacattcaaatttaagaaaactctcagtctaaacaaagca
agcaacggagtaccagctttaaatgagctggaagctgttcagtctagcagaattagcacc
aatgagcccagtgatctggatggagatgatgagtggttgacaactcgcccctattctttc
aaggaagacagctcaaattcagccgttaataaagagtctgctgtacactcaaaaatacag
aatgacaactttatcaagaagaatgcagcaggaaatagagcctttttggcaagtgggaaa
aataaaaagccccagcagacatccattatgtcatttgcacagaagaagaagccagtggca
gcagttgctccacacagatcacctgtgaaggcaggggatgattgtggggccaaaagaaag
cgatcccctgcaaaagctattatcaatattcttggtgatgaagatgatgatgatttcttg
gatgattttgaaattccagcatctcctgtggtaaacagaagaagtctcaactcaaccagc
agtaagaagagtgtacaagaaacagtgaaaacatctgtatctctgaacaaaaccacagaa
gctgagagacagatcatggatgcctcagggatgactgatttgtttggaaacagtgattca
gatgaagagagttttgtggcaacaaagcgccgtagaactcttgaggagcccaccccttcc
caccagtctacagtggggggtagtgctgtgttagaacagtctactggtacagatcccacc
actggtgtcaggaccgagcagcagactgccgacatacaacaggaccctacagatgacagt
cattctgagctgtttcacacgatggaggaggtgtgtgacatcgtgtgtaaggccagcacg
gctgatctcatgtccatgtttccccagagttaccagcgcctacagcacctactggccctc
agaaaacagttaaaggattcctgtacagtaaaagatcagcatagagcagtcaccaagagg
ctatcagcccctgcaggttccctctcaagcagtgcagcaacaaacaatgtgaaactgtca
accagtaactccccacaaagattgcaatatcagacacccagcgcagtgaaagctgtgtcc
caacaggccaacatgaattcctgtactacctctagtccagtcctacctcagagatcagtg
ttgttgtcaaatacctcaaccccagccacagacagaaacttcaattctccaagctctggc
cagagtaaggctttctccttcaagaaaactaccccgattggtttccaatccccaattcca
tgtggtgaaagtttctttgaagaagatgctaaattaacccagacacaccacagtttcatc
agttcattcaacaaaaagtcccctagttcttcttttaaagaaccacctgtaatgaatttt
aatcagtcaactaattcattactgaaccaatcagatactacatgtgctaaccaatcaact
tcttcctcacatttcaaccaatcggcagcagtcacttataactccttcagtactgttgaa
gccccttctaggactgactttagctttgactacaaattaaacaatgacagtggtgtgatt
caaacccagtcagcaagggacaaattttcatccagtgtgcctgattcagaggaggaggct
gatgtgattgatcaatttccagatgatctgttttctcctgatgattttgattctgaattt
acagaggaggtgaagacagactctctaccccagctctcctctccccgaagacaaagcacc
aatcaaagctttgcctctccaccaagtacaaaacgtagagaagaggaagagaacaaggaa
tttgatggatacaattttaagcacagtacccttatgactgagacttttcatcaggtgttt
ggactgcgggaattcaggaaaaaccaactcaaggccatcaatgctgccctgctgggaaat
gactgctttattctcatgccgacaggcggtgggaagagtctgtgctaccagctgcctgcc
ctggtaacagggggtgtgtccatcatcatctcacccctcagggcactgatacaagaccag
gttacacgactttgctctatggatatagcagcaggacagttgtcctcagacatggaccag
ggccagtctgatcagatctacagaaagatgtattacaaaaatcctgagatcacactgctt
tatgtaaccccagagaagatatctgctagtggtaagcttttgggaagtctggacaattta
cacaggagaggaaagttgactagatttgtgattgatgaagcccactgtgtgagccagtgg
ggccatgatttcagaccagactacaagaaactggggattctgaaacagaagtaccccggg
gttcccatgatggccctgactgccacagccaacatgagggtccgtaaagacatcatctat
cagctgggaatgaagaaccctaaatgctttgttcaaagtttcaatcgtccaaatctgaag
ttccgagtggagccaaagaaaccatcaacactgacagctgatatcaccaaactgataaag
gagcagttttctggaaaatgtggcatagtgtactgtctctcaagaaaggagtgtgataca
gtagctgcaaacttgggtaaggcaggcattcaggctgtgtcctaccatgctggactgggg
gacagtgacagaatcactatccaggagaaatggttgaacggacaccgctgtaaggtcatt
tgtgccaccattgcgtttgggatggggatcgacaaaccagatgtacggtttgttattcac
tactccttacccaagtcagtggagggcttctatcaggaggcggggcgggcggggagagac
ggacagctggcccactgcatcctgtactacacctaccaggacgtcaaacggctgcgcagg
attatagagatggaccaagcagctacgtttgactccaagagagttcacatagacaacttg
ttcaggatggttcagtactgtgagaacgtagccgactgtcgacgttctcagctcctgaat
tactttggagagcgagactttaacagagaggagtgtgggaacttccgcggagcaatctgt
gacaactgtgtatcaaaggagtccttctcgcttcgtgatgtaacagatgatgttaaggcg
attgtgaaatgtgttcaagatttgactgtcagtggaagaaggggaaacaactacactctc
atctattttgtggacatattcaggggagccaaaactggcaagatttgtgatgctggacat
gacaaggtagctctgtatggtcgggggaagaactacagtcgggcggacgctgagagacta
ctcaggaagttagtgattgacgccatcctacatgaggacctccagatcacggcagctgac
accaccgcatgttacatcaagctcggacctaaagctaatgatgtcatgatgggcaggcaa
aaggtggaattacaagtccagggcagcagaaagagaacagaggtggcaaagattgggaaa
gagccagttagtcagagggaaaatgctattgaagaatgtctgtgtgagctcctggaaatg
gccaaaactattgctgctgagcatggactacgaaattacgccactgtgttccctattcta
actctgagacagctggcagagaagacaccactgactgtggaggaaatgacagagaaggtt
gatggcttgccaaaggctaaagtcaacaaatacggagctgaaagattcttggacattacg
aaaaattatcatttaattatgtcaaacttgcagcaggaggaggtagaggctgatgactcg
gacgtccccgagtgggagtcgccgtactttgtgggtgagtccaccaccccctcaaaccaa
ggcagaaagcggggatcctataaaaagagaggatttagaggaaagaagagaggaggtggc
agcaaatctagtgctggaaaatcttggaatacatctgacaaagggaacaaattttcatcc
tacaaatcccgagggtcaactaaaaaggttacaggtaatttcaaaagggggggatcaagt
agttcgcgtggaggatccagcaattctagaggtggatttagtggaggagggctaggattc
atgcctgtaccccagcctaaccggtccttccttagcagtggcgggggtactttctttgga
tga
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