Magallana angulata (Portugese oyster): 128178941
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Entry
128178941 CDS
T09348
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
KO
K13884
macrophage receptor with collagenous structure
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128178941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128178941
Membrane trafficking [BR:
canu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
128178941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
128178941
NCBI-ProteinID:
XP_052702336
LinkDB
All DBs
Position
3:47354328..47366860
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AA seq
349 aa
AA seq
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MEKSREILEVTRIAFHVKVLYGCLIVHFSVSVFMAVTLFRSRDCDQTPNVGNSTDQKGFH
ASHRTKNTYSENTEENLHWVHRFRRSYYLLQDENCETFLRVCRSSLGNSFLIKGNKGDRG
YNGFSGAPGNPGQTGPKGDMGIPGLEGPMGPKGEEGLPGLRGLPGERGPQGGEGRPGLPG
LTGAKGDKGKQGILGFPGKIGEPGPRGDKGSTGERGLIGPMGFDGPSGPPGPAGPKGYKG
DKGPTGINGYPGDKGEVGEKGERGYPGYPGPMGLPGPKGQKGECQVSTIKMENLRMGKVA
TNRPARTPPQRNTYAGIPNQEGGVRNGAESILNTIYVMLYSFIFFYAFC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagccgtgagatattggaagttacaaggatagcgttccatgtcaaagtcctg
tatggatgtttgattgttcacttttcggtgtccgtgtttatggcagttaccttgttcaga
agtcgggattgtgaccagactcctaacgtcgggaattccactgaccagaaagggttccat
gcttcacataggaccaaaaatacttatagtgagaatacagaagaaaaccttcattgggtc
catcgatttcggaggtcgtattatcttctacaggacgaaaattgtgaaacatttctccgg
gtttgccgcagttcactagggaactctttcttaataaaaggtaacaaaggtgatcgaggg
tacaatggattttctggagccccgggcaatccagggcaaactggacccaaaggagatatg
ggaatcccggggcttgaaggtcctatgggtcctaagggagaagaaggtctacctgggctg
cgaggtctacctggagagagaggaccccaagggggagaaggacgtcccggacttccagga
ttaacaggtgccaaaggagataaaggaaaacagggcattctgggatttcccgggaaaatc
ggggagccagggccccggggtgacaagggatctaccggtgagagaggcctcattggtccc
atgggattcgatggaccctctggcccacctggtccagccggaccaaaaggatataaaggt
gacaaaggaccaactggcatcaatggttaccccggagacaaaggagaggttggtgagaaa
ggcgagagaggttacccaggataccccggaccaatggggttaccgggacccaagggacaa
aagggagaatgtcaagtttcaacaattaaaatggaaaacttaagaatgggaaaagttgcc
acgaaccgtccagctcgcactcctcctcaaaggaatacatatgcagggattccgaatcaa
gagggcggcgtgcgaaacggggcagagtcaatactaaacactatctacgtgatgctctat
tcatttattttcttctatgcattttgttga
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