Magallana angulata (Portugese oyster): 128179449
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Entry
128179449 CDS
T09348
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128179449
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128179449
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128179449
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
128179449
NCBI-ProteinID:
XP_052702839
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All DBs
Position
4:11342912..11352557
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AA seq
560 aa
AA seq
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MSEDTLSFHEMGLDDRLLKAISQLGWSEPTPIQEKAIPLALDGKDILARARTGSGKTAAF
CIPVIQKILTAKQTSSTEQCVKALVLTPTKELCHQAYRNLMDLTSSCSREVKVLDISPQV
PLPTQKPMLMEKPDIIVATPTRALAHIKAGNLDLRQSLELLIIDEADLLFSFGYEDDVRG
ILSNLPKIYQAFLMSATLSEDVRALKRMVLHNAVILKLEESQLPEASQLTQYHIKCEEQD
KFTLVYALMKLNLLRGKSIIFVNEVNRCYKLKLFLEQFAIPACVLNSELPVNSRCHIVNQ
FNEGLYDIIIASDENLLMDPKTKPLDPEKKKDKKRKKKDKEYGVSRGIDFQNVSNVINFD
FPCDVDTYIHRVGRTARGDNQGSALSFVSVKDMDLLVEVEKTLSESGTEEDSVFKPYNFK
MDEIDGFRYRAKDAMRMVTKTAIREARLKEIKQEMLASNKLKTYFEDNPRDLQVLRHDKS
LHTVKVQKHLKNVPDYLVPQTLRHMRGMSDKPCKSKARRKNMAPKGPTKAEIKYKKRKAD
PLRSFESAGLVGGGKKKKKS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagacactttgtcttttcatgagatgggtcttgatgacaggcttcttaaggca
atttcccaactgggttggtctgagccaacaccaattcaggagaaagctatcccacttgcg
cttgatggaaaagatatattggcacgggcaagaacaggatcaggcaagacggctgcattt
tgtatcccagtcatacagaaaatactaacagctaaacagacaagtagcacagagcaatgt
gtcaaggcattggtccttacccctaccaaggagttgtgtcatcaagcatacagaaattta
atggacctcacatcaagctgttccagagaagtgaaagtccttgacatttcaccccaggtg
cctcttcctacacaaaagcccatgttgatggagaaaccagacatcattgttgccacgcct
acccgagcattggcccacatcaaagcgggtaaccttgacctcagacagtcactggagttg
ctgattattgacgaggctgacctacttttctcctttggatatgaggatgatgttcgagga
attcttagtaatcttccaaagatataccaggcctttctgatgtcggctacactgagtgaa
gatgtgcgggccctgaagagaatggtgctccataatgcagtgattttgaaacttgaagaa
tcacaattacctgaggcatcacagctgactcagtatcacataaagtgtgaagaacaggat
aagtttacattggtgtatgctttgatgaagttaaacctacttcgtgggaagtccatcatc
tttgttaacgaggtcaatcgttgttataagttgaagttatttttggaacagtttgcaatc
ccagcttgtgtgttaaactccgaactcccagtcaattcaagatgccatatagttaaccag
tttaatgagggtctgtatgacatcatcattgcttctgatgaaaatttactgatggatcca
aaaacaaaaccattggatcccgagaaaaagaaggacaaaaaacgaaagaagaaagacaag
gagtatggtgtgtctagaggaatagactttcagaatgtgtccaatgtaataaactttgac
ttcccttgtgatgtggatacatacatacacagagttggcaggacagcccgtggggacaac
caaggcagtgctctgtccttcgtcagtgtcaaggacatggacttgttagtggaggtggag
aagacgctctcagaatcaggcactgaggaagacagtgtttttaagccatacaacttcaaa
atggatgaaatagatggattcagatacagagctaaggatgccatgaggatggtgacaaaa
acagcaatacgagaggctcgactgaaggagatcaaacaggaaatgttggcctccaacaaa
ctgaaaacatactttgaggacaatccacgagatctacaggtcttgagacacgacaaaagt
cttcacacagtgaaagtacagaaacatctcaaaaatgtccccgattatctagttcctcag
actcttagacacatgcgaggtatgtcagacaaaccttgcaaatcaaaagcaaggcggaaa
aatatggcacccaaaggacccacaaaggcggaaattaaatacaagaagaggaaagcagat
cccctgagaagttttgaatcagccggactggtgggaggggggaagaagaaaaagaagtca
tag
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