Magallana angulata (Portugese oyster): 128179717
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Entry
128179717 CDS
T09348
Name
(RefSeq) LOW QUALITY PROTEIN: prominin-1-A-like
KO
K06532
prominin 1
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128179717
04090 CD molecules [BR:
canu04090
]
128179717
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128179717
CD molecules [BR:
canu04090
]
Proteins
128179717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Collagen_mid
ALIX_LYPXL_bnd
Zw10_N
Motif
Other DBs
NCBI-GeneID:
128179717
NCBI-ProteinID:
XP_052703217
LinkDB
All DBs
Position
4:complement(48202792..48234660)
Genome browser
AA seq
907 aa
AA seq
DB search
MGRVVRHWTGIVILLAWINWGYCDDPVLTPATLTDSGGNTANANSSIKWAPLPSFDSYKT
GDIEYDSSGLAPLNNFAKAFINGAVFPLGVPWDLMEKAIDGTLMTDITANYMNYLQQFGG
YGACIIIGFLFIFIFPLIGLCFCCCRCCCSNCGGKMMQHNEDVKADCKRRTFAIILFVLI
AFTGAGMICVYLSNDQMSTALNNFDDVVVSNMDDLTTYASNVVKETKYIVNTNFNFTTSV
ITRDLDNLGYVLGIPIRTTLKTQGNLDTAISSANNLVTRVTQIAAALTTLNTTLGDVKVK
AEILSSNLTTLKTDIDAAITGAGCPSGPNCPDTSGVVMGFDTNDFPDISGPLSSISSVEN
QNLSAIIIQASSEIENIPERVTNETRTTVSDLKTMVSNFSGEIDPLIEQVENIQDSISTN
GSIADIKKQVKDMVDVGSTYDKYRWYGGVGLTSIVLLVVLLQILGLGFGTCSQNSNTRPT
ERGCVGTSAGKMLMASVGFVFIFSSFXMLLTTFTFMLATPLHRFICDPLTDSSLSDLDTI
VDKIYKFQYGTSNGSLLGKMLFNNASIDLRVSKLLQDCQGGAAAFKALKLNNLFDVSTLT
NFTKDLNIQSEVDKINIDLSTVKILTPSLLDQLNEMKNAINVNFTKFREELGKSTTGQNM
SALADQLDTLAGSCSPGCNAATQTSLRDLATRTRSIESNELANLTTALTQLGTDLNTLES
TVNGTDTDVDNCINNFNISEIFVQNNGSDVVKNEAKKFADRIIGIVTSFADDALYALDNE
IGKCTPIWNLYNTLFVISLCQYTVDSLNGFWFSLGWCIFFFIPSIIFSTKLAKHYRRMSQ
LDNDYEDDKDELQLPEVSSDKYHFLHNKVHPEDKEWNGSKSPFGSNKVGHYDPSSAQSNP
PPYNTDW
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggagagtggtcagacattggacaggaatagtaatcctgttggcttggattaattgg
ggatactgtgatgatccagtattaactccagcaaccctcacagattccgggggaaacaca
gccaatgctaacagttctatcaaatgggctccactgcctagctttgattcatacaaaaca
ggggatatcgaatacgattcctcagggctggcacccctcaacaattttgccaaggctttt
attaacggggcggtgtttcctttaggagttccatgggatttgatggagaaagcaattgat
gggactcttatgactgacataactgcaaactacatgaattatctgcagcagtttggagga
tatggagcctgtatcatcatcggcttcctcttcattttcatcttccctctgattggactg
tgcttctgttgctgtcgatgttgctgtagcaactgtggagggaaaatgatgcaacacaat
gaagatgttaaggctgactgcaaaagaagaacatttgccatcattctgtttgtcctgata
gcatttaccggggctggaatgatatgtgtgtacctgtctaatgaccagatgtctactgca
ctgaacaattttgatgacgtcgtcgtctccaacatggatgatctgaccacctacgcttca
aatgttgtcaaggaaacaaagtatattgtgaataccaactttaattttaccacgtctgtc
ataacaagagatctggataatctaggctacgttttgggtattcccatcagaacaacactg
aagacacaaggcaatttggacacagctatatcctcagccaacaacctggtcacaagggtt
acacagatagcagcagctctgacgaccttgaatacgaccttgggagatgtgaaggtgaag
gctgaaatattgagttccaatcttactaccctaaaaactgacatagacgctgcaataacg
ggtgctgggtgtcctagtggcccaaactgtccagataccagtggggtagtcatgggattt
gatacaaatgatttcccagacatcagtggtccattgtcctccatatcatctgttgaaaat
cagaacttgtcagccataatcattcaggcctcgtctgaaattgagaacattccagagaga
gtaacaaatgagacaagaacaacagtgtcagacttgaagaccatggtctctaatttttcc
ggtgaaatcgaccccctaattgagcaagtagagaacattcaagactccatctcgacaaac
gggtccatagctgacatcaagaagcaggtaaaggatatggtagatgttggaagtacctat
gataagtacaggtggtatggtggcgtgggtctgacctccattgtgctgttagtggtactc
ctacagattctgggcctgggatttggcacctgtagccagaactcgaacacccggcccaca
gagcggggatgtgtgggtacctcggcagggaaaatgctgatggcgtctgtgggcttcgtg
ttcatcttttcctcatttntgatgttgctgacaaccttcacattcatgttagcaaccccg
ctacaccggttcatttgtgaccccctcactgactcttctctcagtgaccttgacacgatt
gtggacaagatatacaagttccagtatggtacttcgaacggctccctccttggtaaaatg
ctctttaacaacgctagcattgaccttagggtcagcaaacttctgcaagattgtcaggga
ggagctgctgcctttaaagctcttaaactgaataacttgtttgatgtcagcactttaact
aacttcacaaaagacttaaacattcagtcagaggtagataagataaacattgacctcagc
acagtcaagatcctgactccgagtctactggaccaactcaacgaaatgaagaacgccatc
aacgtcaactttaccaagttccgagaggagttgggtaaatccaccaccggacagaacatg
tctgccctcgctgatcagctggacactcttgcagggtcgtgttctcccggttgtaatgca
gccacacagacatcactgcgggacttggccaccagaactcgctctattgaaagcaacgaa
ctggccaatctgacaactgccttgacacagcttgggactgatttgaacactttagagtca
acagtcaatggaactgatacggatgttgataactgcatcaacaactttaacatctcggaa
atatttgtacagaacaatggctctgatgttgtcaaaaatgaggccaaaaagtttgctgac
cgaataattggtattgtgacctcatttgctgatgatgcattgtatgctcttgacaatgag
attgggaagtgtacccccatatggaacctgtacaacactctgtttgtgatctccctctgt
caatacacagtggattccctgaacggtttctggttttccttgggatggtgcatctttttc
ttcatccccagcattattttctccaccaagctggctaaacattatcgacggatgtctcaa
ctggacaatgactatgaagatgataaagatgagctccagcttccagaagttagcagtgat
aagtatcattttctgcacaacaaagtgcatccagaggacaaggaatggaacgggtctaag
tcaccatttggcagcaacaaggttggacactacgacccgtcttctgcccaatccaacccc
ccaccctacaacacagactggtga
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