Magallana angulata (Portugese oyster): 128180009
Help
Entry
128180009 CDS
T09348
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
canu01002
]
128180009
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128180009
Enzymes [BR:
canu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128180009
Peptidases and inhibitors [BR:
canu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128180009
Ubiquitin system [BR:
canu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128180009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
128180009
NCBI-ProteinID:
XP_052703703
LinkDB
All DBs
Position
4:38793772..38822236
Genome browser
AA seq
2565 aa
AA seq
DB search
MTIVMKGGQSGGDAPQDAPPHQGTTQVPPSTPQNNTGPPASGSVVMTDEVAPADVSIDLV
ELKDDQEPDFPMVELGRLDEMINRPRWVVPVLPNGELEVLLEAAIKLCKEGLDTKSEPCQ
RFFREGLTVSFTKIMTDEAVSGWKYEIHRCILKNAEKLIELVVAKLSQDWFPLLELLAMV
LNPHCKFHIYNGSRTSESIQAGTENSEELFARPPDPRNPKGWLVDLVNHFGKLGGFQILQ
ERFKSGQLSVPVVAALIKPFGQCAEVLTPQTVEQYFLPIVDIVPKFLNELTDEELKKESK
NEAKNDALSSIIKGLKQLVNKLPNQEDTIKTLEGFRLKMILRLLQISSFNGKMNALNEVN
KVISNVSFQSSRHSQMEEDEWLTADKMAEWIQKNGVLTIVLRDSLHQPQYVEKLEKILRF
MIKEKALTSDDLDKLWEAQSGKHDAIVKNVHDLLAKLAWDFSPEQLDHLFECFQVSWTHA
SKKQREKLLELIRRLAEDDKEGVMAHKVLGLLWNLAHSEDVPTEIMDQALTAHIKILDYS
CSQDRDAQKMTWITKFVEELKNDKWVLPALKQIREICQLFPESPQNFPHAPQRASHVYYR
NTVIAQLQSNHSIVMLVATNLSNYMKKARELAREHPDLDSSNILPDGRFNHIQQIQERLR
FLRFLLKDGQLWLCESQARQIWQCLAESAIYSSDRESCFKWFAKLMGEEPDLDPEITKDF
FEQNILQLDPSLLTENGMNCFERFFKHVNQKENKIIAKRRGGHLMDDLELIGMDYLWRVV
LLSPDEVANKAIILLKDIYTNLGPRLQQNQVEIHDDFIQSCVDRLRALYDTVCVLEKDKD
STNRVMQETTRMVRVLTVLREYVAECDEAYTEERSILPLSRACRGKLVTLIVRFPSQGRQ
MDDIDIWSHTNDTIGQVRRQVLCKIKASSNIKVDLYANGELLDPVEDKRLISQIPLREKS
LITAKLIQVGSNMPSSPDSSSDSSAGSPHHTFDGPNIEAESCLPGVIISNNNRYTQFLFQ
LSDLGCQLQVARLRDTARAVLKLMPADVHTIDQLKTICAEHSRGDTTYSNDLEAMFFTPS
ATQALYNIEVAYSLLMPAVETTSDEAFEFQFNFVKSGGVPIAMNMLTKNNFLPSADLPTR
RAAYITVMKICKLMLTTVSHAKFQVVVEACSADPQSPNITQAEHSHALILQQALQFIPNP
GAEVMTRTVGLRLGQQLLDQAAKFVPDMSVIKAIQRIAWASSSSSLHLVHATNEEIHKAL
EKRQDHVEMEDLTVARESLEVLTVCLMLCPPALDALNKDKSWQTFIKDLLLHCKNRPVRV
AASEQFYLMATRCCGGTRPMVFFITLLFCELSEAVKENAKQAHEYFNLLWKLLNYASAAE
VKLPNAEKQLNNEIQWIKKTKDLVINSGEAIVEDALLEGHLGITRELLAFQSPEKKYNIG
SEKGGSNLIRELVEDFLFPASKIVLQSRKTGGDFPLVTAVPVCATPPTVIAAFDLLVALC
TNCVPNLKCLAHMLLEMFYHGEPPLTEWEYLPPVGPRPLKGFVGLKNAGATCYMNSVLQQ
LFMIEEIRSGILSVEGVAEDVIDEEYGEEKTENEANADMGEEERKDEEKPVVINRDEERK
EYNLGVLKRIQLIFGHLAASKLQYYVPKGFWKHFKLWGEPVNLREQHDALEFFNSLVDSL
DEALKALGQPPVLSKVMGGSFADQKICKDCPHRYQREEPFTTLNVDIRNHQNLLESLEQY
VKGDLLEAANAYHCEKCNKKVDTVKRLVIKKLPKVLAIQLKRFDYDWERESAIKFNDYFE
FPREFDMEPYTVQGLAKIEGEIIDDDIENKEQSTKYKLFGVVVHSGQASGGHYYSYILHR
GEDNQPKWYKFDDGDVSECKMEDDEEMKNQCFGGEYLGEVFDHMLKRMAYRRQKRWWNAY
ILFYERQDEKDEKDIYKTLQDLTIVNKPSQIKMPNCIEKCVRKQNIMFMHERSQFCPEYF
QFMKKLLNCNPVFTHGPQEKVTQDMENLAMISTELASKFLFSVGFHTKKALRGAANDWYE
ALNCHLRSSKKVRNWFAHNVFFSHTNRFAEYLLECPSSEVRNAFSKIIVCLAHFALKDGP
CPPPLVQGLYGPGQQADPSATLSDHLLLAVLQLLRKEVSDHGRHLQQYFHLFLMYSNLGE
QEKMQLLKLNVPSLFMLVALDEGPGPPIKYQYAELNRLYSVVSVLVRCCDVSSRCLSSNQ
GDPPKPNPYGDTSISQPLMPLQAQVGDLLYGKTGYVKKLIEDCNNSEDTCKLLRFCSWEN
PHFSSTVLSELLWQVAYSYTYELRPYLDLLLQMLLLEDSWQNHRIHNALKVNPDCVLILG
IPDDRDGLFDTIQRSKNHYQKRAYQCIKMMVSLFTLCAPAAEMLQSNGDVKRKWSWAVEW
LNDELERRPYPGNAQYTYNNWSPPAQSNETSNGYFLERSHSARVTLSKAYELCPEEEPDD
AELSDEQETPHPDENPPGYQARQSPQQGTSTKPEGGTTSQQPKQEGSTNQQFQNNHVNST
HNAQQVQAPIVPHDQIVNQLNNQNNSQTGENPDTGEEEKKKTNKE
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgtaatgaaagggggacagtcagggggagatgcccctcaagatgctccacct
caccaaggaacaactcaggttcccccgtcaactccccagaacaataccggacccccagct
agtggatctgtagtgatgactgatgaagtggctccagcagatgtgtccattgatctagtg
gaactgaaagatgaccaggagcctgacttccccatggtggagttggggagactggatgaa
atgattaaccggcctagatgggtggttcctgttctgcctaatggagaactagaagttctt
ttggaagctgccatcaagctctgtaaagaaggactcgatacaaaaagtgaaccttgtcag
aggttcttcagggagggactgactgtatcatttactaaaataatgacagatgaagcagtt
agtggttggaagtacgaaatccatcgatgcattttgaaaaatgcagaaaagttgattgag
ttagtggtagccaaactgtcccaggactggttcccactgttggagttgttagccatggtt
ctgaatccacattgcaagtttcatatctataatggaagtcgtacctcagaaagtatacag
gctggtactgagaactcagaggaattgtttgctcgtcctcctgatccgagaaatccgaaa
ggatggctggtagacttggtgaatcattttgggaagttaggtggatttcagattctgcag
gaaagattcaaaagtggtcaactctctgtgccagtagtagcagccctgatcaaacctttt
ggtcagtgtgctgaagtcctcacaccccagacagttgaacagtacttcttgcctattgtt
gatattgttcccaaatttctaaatgagttaacagatgaggaattaaaaaaggaatccaaa
aatgaagcaaagaatgatgctttgtcatccattatcaaaggactgaagcagctggtgaac
aagctaccaaatcaggaagatacaataaaaactttagagggttttaggctcaaaatgatc
cttaggttgttgcaaatatcttctttcaatggaaaaatgaatgcattgaacgaagtgaac
aaagtcatatccaacgtctcattccagtccagtcgacactctcaaatggaagaagatgag
tggctcacagcagacaaaatggccgaatggatccaaaagaacggtgtgctaacaattgtt
ttacgagacagcctccaccagccccagtacgtggagaagctggaaaagatactgcgattt
atgatcaaggaaaaagccctgacctctgacgacctggacaagctgtgggaggcccagtcg
gggaaacatgatgccattgtgaagaatgtgcatgacctgttggcaaaactagcctgggat
ttctcaccggaacagctggaccatttatttgagtgtttccaggtaagctggactcatgca
tcaaagaagcaaagagaaaaattgttggagctcattcgacgattggctgaagacgacaaa
gaaggtgtaatggcacacaaggtcctaggattactgtggaacctagcacacagtgaggat
gttcctacagagatcatggatcaggcattgacagcccacatcaagatcctagactacagc
tgctcacaggatagagatgcccaaaagatgacttggattaccaaatttgttgaggaatta
aaaaatgacaaatgggtgttgccagctttgaagcagattcgggaaatctgtcagcttttt
cctgagtctccacaaaattttccccatgctccacagagggcctctcatgtttactatcgt
aacacggtgatagcacagctccagagtaaccactccatagtgatgttagtggccaccaat
ctgtccaactacatgaagaaagctcgcgaactagcacgagagcatccagatttagattct
agtaatattctacccgatggaagatttaatcatatacaacaaatacaagaacgtcttagg
tttttaaggtttttactaaaagatggtcagctgtggttgtgtgaatctcaagccagacag
atttggcagtgtttagcagagagtgcaatttattcttcagatagagagtcttgttttaaa
tggtttgctaagctcatgggagaggagccagatttggatccagaaataacaaaagatttc
tttgaacaaaatattctacaacttgatccaagtctgcttactgagaatggaatgaattgc
tttgagagattctttaaacatgttaatcaaaaagagaacaaaatcattgctaagaggcga
ggaggccacctaatggatgaccttgaactcattggaatggattacttgtggagggttgtg
ttattaagcccagatgaagtagcaaataaagcaattattttactgaaagacatttacaca
aaccttggaccacgcttacaacaaaatcaggtggagattcatgacgatttcatccagtcg
tgtgtggaccggctgagggcactgtatgacacagtgtgtgtgctggagaaggacaaggac
agcacaaatcgtgtgatgcaggagacgaccaggatggtgcgcgtgctgaccgtgctcaga
gagtatgtggccgagtgtgatgaggcctacacggaggagcgatctattctcccactcagc
agagcatgtagagggaaattagtaaccttaatagttagatttcctagtcaaggccgacag
atggatgatatagacatctggtctcatactaatgatacaataggacaagtgcgaagacaa
gttctgtgtaagattaaagctagtagtaatataaaagtggacttgtatgctaatggagaa
ctacttgatcctgtggaggacaaaagactcatatctcaaataccattacgggaaaaatcg
ttaataacggccaagttgatacaggtggggagtaatatgccttctagtccagacagcagt
tcagatagctcagcaggatcacctcaccacacatttgatggtcctaacatagaggctgaa
agctgtttacctggggtgataatatccaacaacaaccggtacactcagttcttgttccaa
ctgtcagacttgggctgtcagctacaggtggctcgactcagggacacggccagggcggtc
ctcaaactcatgccagcagatgtccatacgatagatcaattaaagacaatatgtgctgag
catagcagaggagacactacatactctaatgacttagaggcaatgttttttaccccttct
gcaacacaagctctgtataatatagaggttgcatatagtctactcatgcctgcagtagaa
acaacgtcagatgaagcgtttgaattccagtttaactttgttaagagtggaggtgttcca
atagccatgaacatgttgaccaagaacaactttctcccctcagcggatttaccaactaga
agggctgcctacattactgtgatgaagatctgtaagctgatgttgaccacagtcagtcat
gccaagttccaagtggtggtggaagcttgcagtgcggatcctcagtctccaaatatcact
caggcggaacacagtcacgccttgatcctacagcaggccctgcagttcatccccaaccct
ggggcagaggtcatgacacgaaccgtgggactgaggctcggacaacagttactggaccag
gcggccaagtttgtgcccgacatgtctgtgataaaggccatacagagaatagcctgggca
tcaagcagcagctctctccatctagtgcatgccaccaatgaggaaatccacaaagctctc
gagaagaggcaggaccatgtggagatggaggatctaacggtggccagggaatccctggag
gtcctgactgtttgtctgatgctgtgtccccccgccctagacgccctcaacaaagacaag
tcctggcagacattcatcaaagacctgctactgcactgtaaaaacaggccagtaagagta
gcagcgtcggaacagttctatctgatggccactcggtgttgtgggggaacccgccctatg
gtcttctttattactctgctcttctgtgaactcagtgaagctgtgaaggagaatgcaaag
caagcccatgaatactttaatttactatggaaattactgaattatgcgtcagcagctgaa
gtgaagctaccaaatgcagagaagcaattgaataatgaaatacagtggataaagaaaacc
aaggatttggtgatcaactctggggaagccattgttgaggatgctctgttagagggacat
ttaggaatcacccgtgaactgttagcattccagtcacctgaaaagaagtacaacattggt
tcagagaaaggagggtcaaacctcattagggaactggttgaagattttcttttccctgcc
tcgaaaattgtcctacagagcagaaagactggtggagatttcccattggttactgcagtg
ccagtatgtgccacgcccccaactgtgatagcagcctttgatcttctggtggccctctgt
acaaattgtgtgccaaacttaaaatgtctagcacacatgcttttagaaatgttttatcat
ggtgagccaccattgacagaatgggaatatctgccccctgtaggtccgagacctctgaaa
ggttttgtgggcctaaagaatgcaggggctacttgttatatgaactcagttctacaacag
cttttcatgattgaggaaattcgtagtggaattttgtcagtagagggcgtggctgaggat
gtgattgatgaggagtatggagaggaaaaaaccgagaacgaggccaatgctgacatgggt
gaggaggagaggaaggatgaggagaaaccagtggtcatcaaccgagatgaggagcggaag
gaatacaatttgggggtcctcaagaggatccagctcatcttcggccatttagctgccagt
aaactacagtactatgtgccaaaggggttctggaaacatttcaagttatggggtgagcct
gttaatctacgggagcagcatgatgcattagagttcttcaacagcttggtagatagttta
gatgaagccttgaaagccctgggacaaccacctgttttgtcgaaagtcatgggtgggtct
tttgctgatcagaaaatctgtaaagattgtcctcacagataccaaagagaggagccgttc
accacactcaatgtagacatccgcaatcaccagaacctcctggagtctctggagcagtac
gtgaagggagacttgttggaggctgccaatgcttaccattgtgaaaagtgcaacaaaaag
gtggacacagtgaaacgattagtcatcaagaaactacccaaagttttagcaattcagctc
aagagatttgattatgactgggaaagagaaagtgcaataaagttcaatgactattttgaa
tttccaagagaatttgacatggaaccttacactgtacaaggacttgcaaaaattgaaggc
gagatcattgatgatgacatagagaacaaagaacagagcaccaagtacaagctgtttggg
gtggtggtacacagtggccaggccagtggggggcactactactcctatatcctccacagg
ggtgaggataatcagcccaaatggtacaagtttgatgatggtgatgtatccgagtgtaag
atggaggacgatgaggaaatgaagaatcagtgttttggaggtgaatacttgggcgaggtg
tttgatcacatgcttaaaagaatggcctacaggagacagaaaagatggtggaatgcatat
attctgttctatgaacgacaggatgaaaaagatgagaaagatatctacaaaacccttcag
gacttaacaatagtgaataagccatcccaaattaagatgccaaattgtatagaaaaatgt
gtacgaaagcaaaatattatgttcatgcatgagaggagtcaattctgcccagagtacttt
cagtttatgaaaaaattactcaactgtaacccagtgtttactcacggaccccaagagaaa
gttacacaagacatggagaaccttgcaatgatcagcacagaactagcctccaagtttctg
tttagtgtaggattccacaccaagaaggcactgaggggtgcagccaatgactggtacgag
gcgctgaactgtcacttaaggtcaagcaagaaagtcaggaactggtttgctcacaatgtg
ttcttctcgcacacaaacagatttgccgagtatttactggagtgtccatcttctgaggtg
cggaatgccttttctaagatcatagtgtgtctggctcactttgcactgaaggatggtccg
tgtcccccaccactggtccagggtctgtatggtccgggacagcaggcggacccgagtgcc
accctgagtgaccacctcctgctggcagttctacagttactgaggaaggaagtgtcagac
cacgggcgccacctacagcagtacttccacctcttcctgatgtactccaacctaggcgaa
caagagaaaatgcagttattaaaactgaatgttccctccctgttcatgctggtggccctg
gatgagggaccggggcctccaatcaagtatcagtacgctgagctgaaccgtctctactct
gttgtctctgttctggtgcgatgctgtgatgtttcctcccgatgtctttcatctaatcaa
ggggaccctcccaaacctaacccctatggtgatacctccatcagtcagcccctgatgccc
ctccaagcacaggtgggagacctgttgtatggcaagacagggtacgtcaagaaactgata
gaggactgtaacaactcggaggacacctgtaaactactaaggttctgtagttgggagaat
ccccatttctcctccacagtcctcagtgagctgttgtggcaggtggcttattcatacacg
tacgagttacggccgtacttagacctgttactacaaatgctgctgttggaggactcatgg
cagaatcacagaattcataatgctcttaaagtaaatcctgactgtgtgttaattttaggg
ataccggatgacagggatggcttgtttgacaccatacagagatctaagaaccactaccag
aagagagcctaccagtgcatcaaaatgatggtctccttattcacactttgtgcccctgct
gcagagatgttgcagagcaatggtgacgtcaaaaggaagtggtcttgggcggtagagtgg
ttaaacgatgagctggagcgacgtccatacccaggcaatgcccagtacacctacaacaac
tggtccccaccagcccagtctaacgagacttctaacgggtatttcctggagaggtctcac
agtgccagggtgactttgtctaaagcctatgaactttgtccggaggaagagccagatgat
gccgagctctcagatgaacaggaaaccccccatcctgatgaaaacccgcctggctatcaa
gcccgccaatccccacaacaggggacttccaccaaaccagaggggggaaccaccagtcag
cagcccaaacaggagggctccaccaaccagcagttccagaacaaccacgtgaactctacc
cacaatgcacagcaagttcaggcccccatagtaccacatgatcagattgtcaatcagcta
aacaaccaaaacaactctcagactggggaaaatccggacaccggcgaggaggaaaagaaa
aagacaaataaagagtga
DBGET
integrated database retrieval system
