Magallana angulata (Portugese oyster): 128180154
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Entry
128180154 CDS
T09348
Name
(RefSeq) RNA-binding protein FXR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128180154
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128180154
Factors involved in mRNA localization
Other mRNA localization factors
128180154
mRNA cycle factors
Stress granule specific factors
128180154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
FXMRP1_C_core
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
128180154
NCBI-ProteinID:
XP_052704004
LinkDB
All DBs
Position
4:complement(5853448..5878927)
Genome browser
AA seq
726 aa
AA seq
DB search
MEDLMVEVCGPNGTYYKAFVKNVHEDEILVSFENDWQPEQRVKFTNARLPLPDQGKHRDY
RDGENVEVFTSSNEKEQMGWWPALLKMLKGEFAVIEYSGYDSKYTDIVPLERVRPVNSNP
PIDKNTFHKFSIEVPVDLREVCQDEHEHAEFKKHIGGGCVCFDHQEGTLNVLSLSESVIK
RASMLADMHLRNVRQKLMLKKRTEEAVQRLQSTKIRSGYTEEFRVRDDLMGLAIGTHGAN
IQQARHVQGITNIELEEDTCTFKVHGESQEAVKKARALLEYVEETFQVPRELVAKVIGKN
GRNIQDIVDKSGVVRVKIEGDNENETPRQEVMASLGQVPFIFVGTQESTGNAKILLEYNL
DHLKEVEKLRLEKLEIDQQLKSLAGPQAGPYFPPPRERRGSNEPSSDDRGRRGTGRGRGR
GGRRWANERRTYNTDESSPVPIADWSEEMNAEDNRQSGYYTDSILTGRGPRGGGGGYRPR
GRGGRYPRGSGYSSNRSSDFYDQRRYRSDRPSYSTSRYMAYDTDESRDFRSRRRMTDDDD
TVLDNASVTSQDQDDQRDQRPRRRRKNRNRPYGNGSAASGTETDNSVSNYRPSGGRPPQF
QNDSSSNFVNSVKTEPSKVKTEPESKPPGLSKEDNSDRINSAKSSSQSSKPSPKPGSAPP
REQRKPAAPKYSASARNGTSGSESDSKAAKNKNNTPSGKPTASGQPTASSKPTSSTKPKE
QMVNGE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccttatggtcgaagtttgcggtccaaacgggacttattacaaggcatttgtg
aagaatgtacatgaagatgaaatcctggtctcctttgaaaacgactggcaaccagagcag
cgtgtcaagtttactaacgcgcgcctcccactccccgaccagggcaaacaccgtgattac
agggatggcgaaaacgttgaggtgttcacaagctccaacgagaaggaacagatgggctgg
tggccggcattgctgaagatgctgaagggcgagtttgcagtgatagaatacagtggctac
gactcaaagtacacagacatagtccccctagagagggtcagacctgtcaactcaaaccca
cccatagacaagaacacatttcataagttctctatagaagtacctgtagacctacgagaa
gtgtgccaggatgagcatgaacacgctgaatttaagaaacatataggagggggatgtgtg
tgctttgatcaccaggagggaacactcaatgtcttgtctttgagcgagtctgtgataaag
agagcctccatgttagcagacatgcacctcagaaatgtccgtcaaaaactgatgctgaag
aagaggacagaggaagccgttcagaggttacagagtaccaagatacgttcagggtacaca
gaagagttccgagtgcgggacgacttgatgggcctggccatcggaacccacggtgctaac
attcagcaggccaggcacgtacagggcatcaccaacatagagctggaggaggacacatgt
acttttaaagttcatggagagtctcaggaagccgtgaagaaagccagagccctgttagag
tacgtggaggaaacctttcaggtgccgagggaacttgtagctaaggtcattggtaaaaat
ggtcgcaatatacaggacatcgtagacaagtctggagtcgtgcgagtcaagatcgaggga
gataacgaaaacgagacgcctcggcaggaggtaatggcgtcactgggacaagtgcctttt
atatttgttgggacacaagagagtacaggaaatgccaaaatcttgctagagtacaacttg
gaccatttaaaggaggtagagaagctacgactggagaagttagaaatcgaccaacagctg
aagagtttagcgggacctcaggcgggaccctacttcccacccccaagagaaaggagggga
agtaatgagccgtcttctgatgaccgcgggaggcgaggaacaggaagggggcgtggccga
ggtgggaggagatgggccaatgagagacgcacttacaacacagatgagtcctcccctgtc
cctatcgctgattggtcagaagaaatgaacgctgaggacaacagacagtcgggctattac
acagacagtatcctgaccgggcgtggaccgaggggaggtggtgggggataccggccccgg
gggagagggggcaggtaccccaggggatcgggctactcctccaacaggtcatcagatttt
tacgatcagcgtcgatatagatcagatagacccagttattccactagcagatatatggca
tacgatacagatgaatcacgggactttcgttcgcggcggaggatgacggatgacgacgat
acagtattagacaacgccagcgtcaccagtcaggaccaagatgaccaaagagatcagagg
cccaggagaagacgaaagaatagaaaccgtccctatggtaacggtagtgctgcctcgggg
acggaaacagacaatagtgtatcaaattaccgaccctcagggggccgacccccgcagttt
cagaatgactcttcctcaaactttgtgaattcagtgaaaactgaaccctcaaaagttaaa
actgagcctgaatccaaaccgcctggactgtccaaggaagataactctgatagaattaat
agtgcaaagtctagcagccagtcaagtaaaccgagcccgaaaccaggctcagccccgccc
agggaacagaggaaacctgctgcgcccaagtactctgcttcagcacggaacgggacgagt
gggtcggaatccgactccaaagcggctaaaaacaagaacaatacccctagtggtaaacca
accgctagtggtcaaccaaccgctagtagtaaaccaacctctagtactaaaccaaaggag
cagatggtcaacggagagtaa
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