Magallana angulata (Portugese oyster): 128180316
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Entry
128180316 CDS
T09348
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04120
Ubiquitin mediated proteolysis
canu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128180316
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128180316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128180316
03036 Chromosome and associated proteins [BR:
canu03036
]
128180316
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128180316
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128180316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
EIF3I
Beta-TrCP_D
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR35_TULP_N
F-box
Beta-prop_VPS8
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_WDR11_2nd
WD40_2
KNTC1_N
Frtz
F-box_5
Motif
Other DBs
NCBI-GeneID:
128180316
NCBI-ProteinID:
XP_052704267
LinkDB
All DBs
Position
4:36017315..36027023
Genome browser
AA seq
529 aa
AA seq
DB search
MNSIETKMETCSSIDDRSERKLDTDAQIKSLQPAPQKNSEQYLKDRDSCTKSFDNWTEYD
QITFVEHLLSRMCHFQHGQINSFLKPMLQRDFITALPAKGLDHVAETILSYLDAKSLCAA
EAVCKEWYRVISEGMLWKKLIERMVRTDTLWRGLAERRGWAVYLFKGKAGDTPTDHKFYR
NLYPQIIEDIERIETNWRTGRHTLQRIHCRSETSKGVYCLQYDETRIISGLRDNTIKVWK
SKMDSDSQMWDRNTLECVQILTGHTGSVLCLQYDENIIISGSSDSTVRVWDVHTGEMLNT
LIHHCEAVLHLRFCDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAVNVVDFDEKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDCLVVSGSSDNTIRLWDIESGAC
LRTLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLAAALDPRSPAGSLCLRTLVEHSGRV
FRLQFDEFQIVSSSHDDTILIWDFLNVPIETSSTSSTRSPTRTYTYVNN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatagaaacaaagatggaaacgtgtagttccattgatgatagatctgaacgg
aaattggatactgatgcccagattaagtctcttcagcctgcccctcagaagaactcggag
caatacttaaaggacagagatagttgtaccaagtctttcgacaactggacagaatatgac
caaatcacttttgtggaacatttgttatcacgcatgtgtcattttcaacatggacaaatt
aacagttttctgaaacctatgttacaaagagattttatcacagcactaccagcaaaaggt
cttgaccatgtggcagagaccattctttcgtacctggacgccaagtctctgtgtgcagca
gaggcggtgtgtaaggagtggtaccgtgtgatatcggagggcatgttatggaagaaactg
atcgagagaatggtgcggacagacaccctctggagggggctggcagagaggagaggatgg
gcagtgtatttgttcaaggggaaagctggagatactccaacagaccacaaattttataga
aacttatatccacaaattatagaagatatagagagaattgaaacaaactggaggaccgga
cgccacaccctccagagaatccactgtcgcagcgagaccagtaagggggtgtactgtctc
cagtatgacgagacccgcatcatcagcggactcagagacaacacaatcaaagtctggaag
tccaaaatggattctgattcgcagatgtgggatcgtaacacattggagtgtgttcaaatt
ctaactggtcacaccggttctgtgctatgcttacaatatgatgaaaacatcattatatca
gggtccagtgattctacagtcagagtgtgggatgtacacacgggggagatgttgaacaca
ctgattcaccactgtgaggcggtcctacacttgagattctgtgatggcattatggtcact
tgttcaaaggatcgcagcattgctgtttgggacatgcagtcccccacagaaattaattta
cgccgtgtgttagtgggacatcgtgctgccgtcaacgtagtagactttgatgagaaatac
atagtatccgcctcaggagaccggacaatcaaggtgtggagtacatcaacttgtgaattt
gtgcgaacattaaatggacataagcgtggcattgcatgtctccagtaccgagattgtctt
gtagtcagtggcagctcagacaacactatcaggttgtgggacatagagagcggagcgtgt
ctgcggactttggaggggcatgaggaactggtacgctgtatcagatttgacaacaaacga
atcgtcagcggagcttatgatggtaaaatcaaggtgtgggacctagccgcggccctggac
cctcgatctcctgccggcagtctatgtttacggacactagtggagcattctggtcgagta
ttccgcctacagttcgacgagttccagattgtcagtagttctcatgatgacaccattctc
atttgggactttttaaatgtgccaatagaaacttcatctacgtccagcacccgctctccc
acgcggacctacacttatgtgaacaattga
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