Magallana angulata (Portugese oyster): 128180323
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Entry
128180323 CDS
T09348
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128180323
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
canu00535
]
128180323
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128180323
Meiosis-specific proteins
Cohesin complex and associated proteins
128180323
Proteoglycans [BR:
canu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128180323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
128180323
NCBI-ProteinID:
XP_052704303
LinkDB
All DBs
Position
4:21210508..21243712
Genome browser
AA seq
1203 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVEPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAFVEIIFDNSDNRIPIDKDEVVLRRVIGSKKDQYFLDKKMVTKGD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRIKLLREVAGTKVYDERKEESKVILR
ETEGKREKINDLLKYIEERLATLEDEKEELKEYQKWDKMRRSLEYTIHDHELRDTRKKLD
ELQEKRDNSGAMTQKIRDKQQSTVDKVKAITRELRDLKTKMQGVMEEKENLNSENQEVTK
RRAKLELMIKDIQDELEGDKSARSKSEDELKKINEKIQKTQQQLENNLPLYEAQKQREEN
CTQQLSLAEQRRKELYAKQGRGNQFTSRDDRDNWIKKELKSLNRAIRDKEEQIRRLREDL
VNDNKRAEHLGTQTLEISSKIDQNKDIIEQNNRNFNEMKKQRDALQNERNVLWRQETLLQ
QELQSTREELSKKEQGLRSMIGKATLNGIDSVQKVLDSFREQGRYMDVVEGYCGTLIGQL
DCEKTFFTCVEVTAGNRLFHHVVDSDRTGTKILTEMNRLKLPGEVTLMPLNKLDGKETQY
PSTNDAIPMISKIKYDPRFKRAMYHVFGKTLICRNMETATQIARTQNLDCITLEGDQVSR
RGALTGGYYDMRRSRLDLQKGKMEYQQKLAVQEREYQEHKQKLEAVETKINNLVSEMQKM
ETRNSKNKDTFDKMRADLRLMTEEKQAIEKSMSSKETSVASLKASLETMQGSAASLNEEL
GSDLLSQLSVEDQREVDYLNDQIKNLTQQNKEALTERIRLEGEKNKLENLLHNNLMKKRD
RVLHDLQEVSVADRRHKLEQYQTELEQEDEKLTNFKEQTKELDAQLEKMNKEQKEMQSNL
ENWRAKEKEYQDKISDDAKDLEKMTNKQSLLLKKKDECMKKIRELGSLPSDAFEKYQSFN
LKQLFKKLENCNQELKRYSHVNKKALDQFVNFSDQKEKLIKRKEELDSAHQSILDLMNSL
DQRKYEAIQLTFKQVSKYFSEIFKKLAPQGHAQLVMKKGDTDQGEEEDSQDSVPLVEQFT
GVGIKVSFTGNKAEMRDMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDQALDSNHR
KAVADMINELAGNAQFITTTFRPELLEHADKFYGVKFRNKVSHIECVSKEEAEDFVEDDT
THG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtaattatccaaggatttagaagttacagggatcaaaccattgtt
gagccttttagcccaaaacacaatgttatagttggcagaaatgggtcaggaaaaagtaac
ttcttctacgctatccagtttgtcctgtcagatgagtttagtcatcttagaccggagcag
agacaggcccttcttcatgaaggaacaggaccaagggttatttcagcctttgtggagatt
atattcgataattcagataacagaataccgattgataaagatgaagtagtactcaggcgt
gttattggatccaagaaagatcagtattttttagacaagaaaatggttacgaaaggagat
gttatgaacttgttagagagtgctggattttctcgtagtaatccatactatattgttaaa
cagggaaagattaaccaaatggcaacagcccctgattctcagagaatcaaacttttaaga
gaagtggctggaactaaagtttatgatgagagaaaagaggagagtaaagtaattcttaga
gaaactgagggtaagagagagaagatcaatgatctgttgaagtacatagaagagaggctg
gccacattggaggatgaaaaagaagagcttaaagaatatcagaaatgggataagatgaga
agatctcttgagtacacaattcatgaccatgaactaagagacacaaggaaaaaactggac
gagttgcaagaaaaaagggacaacagcggagccatgactcaaaagattcgagacaaacag
cagtctacagtggataaagtgaaggccattacgagagaactccgagatctgaaaactaag
atgcagggggtgatggaggaaaaagaaaatttgaactctgaaaaccaagaagtgacaaag
cgcagagccaagctagaactgatgatcaaagacatccaggatgagttggagggagataaa
agtgctaggagcaaatcggaggatgagctgaaaaagatcaatgaaaaaatccagaaaaca
caacaacagctagaaaacaacttgccactgtatgaagctcagaaacagagggaggagaac
tgtacccagcaattatcattagcggaacagaggcggaaggaactgtatgcaaaacagggc
agaggaaatcagttcacctccagggatgatagggacaactggattaaaaaagaactcaaa
tctctcaacagggcaatccgagacaaagaagaacagattcggagactgagagaagattta
gtgaatgataacaaaagagctgagcacctgggaactcaaacactggaaataagcagcaaa
attgaccagaataaggatatcattgagcagaataacagaaatttcaatgaaatgaagaaa
cagagggatgcattacaaaatgaaagaaatgtattatggaggcaagaaacattattacaa
caagaattacagagtacaagagaagaattgagtaaaaaggagcaaggcctgaggtcaatg
attgggaaggccaccttgaatggaattgacagtgttcaaaaggtgctggattccttccga
gagcagggaaggtacatggatgtggtggaaggttactgtggaacgttaatcggtcaacta
gactgtgaaaagacattctttacctgtgtggaagttacagctggaaatagactttttcat
catgtggtggattcagacaggacgggcacaaaaatcctaacagaaatgaatcgtcttaaa
ttaccaggagaggttacgctaatgccgctcaataaattagacggaaaggagacgcaatat
cccagtactaatgatgccattcctatgatcagtaaaattaaatatgatcctcgatttaaa
cgtgcaatgtaccatgtctttgggaaaaccctgatttgtcgaaatatggagaccgccacc
cagattgctcgaactcaaaacctagattgtataacattagaaggtgaccaggtgagtcgg
cggggggccctgacagggggttactacgacatgcgtcggtcacgactggacctccagaaa
gggaagatggagtaccaacagaagctggccgtccaggaacgggagtaccaagaacacaaa
cagaaactagaggccgtggagaccaagatcaacaacctggtcagtgagatgcagaagatg
gagacaaggaacagcaagaacaaagatactttcgacaaaatgagggcagatttgcgactt
atgaccgaagaaaaacaggcaatagaaaaatcaatgtcttcaaaggaaaccagtgttgct
agtttaaaagccagtttagaaacaatgcagggttcagctgcttcattaaatgaagaacta
ggatctgatcttctgtctcagctcagtgtggaggatcaaagggaggtggactacctcaac
gatcaaatcaagaatctcacccagcagaataaggaggccctgacagagagaatcaggttg
gagggtgaaaagaacaaactggagaatctgttgcataataacctgatgaagaagagggat
cgcgtcctccacgacctccaggaagtgtccgtggctgaccggcgccacaagctggagcaa
taccagacggagctggaacaggaggacgagaaactcaccaacttcaaggagcaaaccaaa
gagttggatgcacagcttgagaagatgaacaaagaacagaaggaaatgcagtcaaattta
gaaaactggagggcaaaagagaaagagtatcaggacaaaatctctgatgatgcaaaagat
ctggagaaaatgacaaacaagcaaagcttgttactgaaaaagaaagatgaatgcatgaag
aaaatcagggaactgggttcacttccaagtgatgcatttgaaaagtatcagagctttaac
ctcaaacagcttttcaaaaagcttgagaactgcaatcaggagctaaaaaggtacagccat
gtgaacaagaaagccttggatcagtttgtgaatttctcagaccagaaagagaagctgatc
aaaaggaaagaagagttagacagtgctcatcagtcaattcttgatctgatgaactcattg
gaccaaaggaaatatgaggctattcagctcacatttaaacaggtgtctaaatacttcagt
gagatattcaaaaagttagccccacaaggtcatgcccagctggtgatgaagaagggggac
actgaccagggggaggaggaggactcccaggactcagtgccactggtggagcagttcacc
ggggtcgggattaaggtatccttcaccggaaacaaggcggagatgagggacatgcagcag
ctgtccgggggacagaaatctctggtggccttgaccttgatttttgccatccagaagtgt
gaccctgcccccttttacctgttcgatgagattgatcaggccctggactctaatcacagg
aaagcagtagcagacatgatcaatgagttggcagggaatgctcagtttattacaacaacc
tttagacccgagttactggagcatgcagacaaattttatggtgtgaagttcaggaataag
gtatctcatatagaatgtgtcagtaaggaggaggcggaagatttcgtggaggacgatacc
acccacgggtga
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