Crassostrea angulata (Portugese oyster): 128180396
Help
Entry
128180396 CDS
T09348
Name
(RefSeq) transcription factor Dp-1-like isoform X1
KO
K04683
transcription factor Dp-1
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03083
Polycomb repressive complex
canu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128180396
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128180396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128180396
03036 Chromosome and associated proteins [BR:
canu03036
]
128180396
Transcription factors [BR:
canu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
128180396
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128180396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
128180396
NCBI-ProteinID:
XP_052704443
EnsemblRapid:
LOC128180396
LinkDB
All DBs
Position
4:42003692..42020801
Genome browser
AA seq
476 aa
AA seq
DB search
MANSNTTLASLWVDDVQGGSPVKIMPGTPGKSAGNGTEIRQDIVRFYKDSGLEPVAKEAG
LLDANGEIAGFQTVQAGGKAVQLVAVPISTTSPAKMSPLKEHTILPKQLTAQQVIQTISS
PRQPMIPIDISWRSGAAQKRASDFTIEADDGFGKRGKKGEKGGKGLRHFSMKVCEKVQRK
GVTSYNEVADELVAEFSDPRNLTSPSDQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIK
WIGLPTNSAQECQNLEIEKQKRLERIKHKTQQLQELILQQIAFKNLVIRNRELETTQGPP
PQNSAIQLPFIIVNTSKKTVIDCSISNDKYEYLFNFDNTFEIHDDIEVLKRMGMALGLEK
GQCNPKDVTRAIKMVPRALEPYVIDLANGGMANSGPSGIRPMSAEEGSSRYKVPAQPSVQ
SSGSSSNDMDIEVANIYSQDSNMGSHSDIHSRATETPSEDFSDDSDTDRSSPVDMS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattccaacacgaccctcgctagtttgtgggttgacgatgttcaaggtgggagc
ccagtgaagataatgcctggtactccaggaaagtcagcagggaatggaacggagatcagg
caggatattgtacgcttctacaaagacagcgggctggaaccagtcgcaaaagaggctggg
ttgcttgacgctaatggagaaattgcaggctttcagactgtccaagctggtgggaaagca
gtgcagttggttgctgtgccaatatcaactacatctccagcaaaaatgtctccactgaaa
gagcacacaattcttccaaaacagctcacagcccaacaggttatacagactattagtagt
cccagacaaccaatgatccctatagacatctcctggaggagtggagcagcacagaagagg
gcatcagatttcacaatagaagctgatgatgggtttgggaaaaggggaaagaaaggtgaa
aagggtggtaaggggctgcggcatttctccatgaaagtgtgtgaaaaggttcaaaggaaa
ggagtgacgtcctacaatgaagtggccgatgaactagtggcagaattcagtgacccacga
aacttgacttccccctctgatcaggcttatgaccagaagaacataaggagaagagtatac
gatgccttaaatgtattgatggcaatgaatatcatttctaaagaaaaaaaagaaatcaaa
tggataggattgcctacaaactcagctcaagagtgccaaaacttggagattgaaaaacaa
aaaaggctagagagaatcaaacacaaaacccaacagctgcaggagcttattctacagcaa
attgcattcaagaaccttgtgataagaaaccgagaactggaaaccacacagggaccccct
ccacagaactcagcaatacaactgcctttcattattgtcaacaccagcaaaaagacagtc
attgactgttccatatccaatgacaaatatgaatatttattcaactttgacaacaccttt
gaaattcatgatgatattgaggtgttgaagagaatggggatggcccttggtctagagaag
ggtcagtgtaatcctaaggatgtcacccgagctattaaaatggtccccagagctttagaa
ccatatgtgatagacttagccaatggtggaatggcaaactctggtccaagtggtatcaga
cctatgtcagcagaagaagggtcttccaggtataaagtcccagcccaaccttccgtccaa
tcttcagggagtagtagcaacgacatggacattgaggtggccaatatatattcacaagac
tctaatatgggctctcactcggacatacactcgcgggccacagaaaccccgtctgaggac
ttttcagatgacagtgacacagacaggtctagtccggtagacatgagttaa
DBGET
integrated database retrieval system
