Magallana angulata (Portugese oyster): 128180679
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Entry
128180679 CDS
T09348
Name
(RefSeq) GATOR complex protein WDR24-like
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128180679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128180679
Membrane trafficking [BR:
canu04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
128180679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
zf-RING_16
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
eIF2A
MIOS_WD40
Beta-prop_Vps41
TFIIIC_delta
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
PALB2_WD40
TcpQ
zinc_ribbon_16
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
128180679
NCBI-ProteinID:
XP_052704773
LinkDB
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Position
4:32674373..32685279
Genome browser
AA seq
769 aa
AA seq
DB search
MNVMHNVSRVVHDRVSPNQLKTLSVNCDGPINALDTSKDNSQVVVAGRSVFKIYSIEEDK
FEEKLNLRVGKNLNLNFSSTDVAWNHIEDHYLASAATNGAVVVWDLNRHSHSKQDFVFSG
QHKRTVNRVRFHENDAHLLLSGSQDGTMHIFDLRKKESSTVFKTGNSIRDVQWCPPRFND
FFFAAADESGNVHMWDMRRPDRYEKQITAAHNGPVFTVDWHPEERNLFATGGRDKTIKIW
DFPKNQVVHQIHTLASVARIRWRPQRRHFIASCSFVVDFSVSVWDINRPYVPFASFDKHT
DVATGIIWRKDDPHVLYSSSRDCYLYQHVFKDAKRPADELVPAGLDMSIHGDISYATLDK
PDLTVKTGRFFTTPKKDVSKTDEFLTYKNSLMFVISNTNKCLSMDYFVDCARNYQLSGAP
LQEMCEHNAELAERYNNDQVAQSWRILKVMFTSSEPTQRVLNATRKETQQEILSEAATPT
NQIGNGDADNSSNTDSEEEEVVNKEDLTNIARGQIPEEWGILFADGDQDIPYNNIDGLQE
FSLQPEAFQPRHEIKDLGTPLDSIQNGHDSPTISANESENNLLSFPTYSNGKEEDEVLGL
FRNTVELPEFTFPHFVSKMLYHYAEQGDVQTAVCILSVLGPKHRPQIEPEVQENWFLSYL
DLLARFQLWTTSNKIIKLCHLPLVSSLNQQSTRIHVNCHRCNRPLQRVGWLCDRCKRVIN
NCSVCHLPVKGLFIWCQGCSHGGHLGHIKEWFGENKQCPTGCGHLCEFT
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaatgcataatgtgtctcgcgtggttcatgacagagtttctccaaaccaattg
aaaacgttaagtgtgaactgtgatggacccataaatgccctggacacaagcaaggacaat
tcccaagtggtggtggcagggagaagtgtattcaaaatatacagtattgaagaggacaag
tttgaagaaaagttaaacctcagggttgggaaaaatctcaatttgaatttcagctccaca
gatgttgcttggaatcatatagaagatcattatttggcgtccgcagccaccaacggtgct
gtggttgtgtgggatttaaatagacattctcactcaaagcaagattttgtgttttctggt
cagcacaaaagaactgttaaccgagttcgttttcatgaaaatgatgcacatcttttgctc
agtggctcacaggatggaaccatgcatatatttgatctacgtaaaaaagagtcgagcacc
gtgttcaaaacaggaaacagtatcagagatgtgcaatggtgtcctccacgcttcaatgac
ttcttctttgctgcagctgatgagagtggcaatgttcatatgtgggatatgcggcgacca
gatcgctatgagaaacagataactgcggctcataatggacctgtcttcacagttgactgg
catccagaggaaagaaatctgtttgccactggtggacgagataaaactattaaaatttgg
gactttcctaaaaatcaggtcgtacatcagattcatactctagcatctgttgctaggata
cggtggcgtcctcagcgacggcactttattgccagctgttcctttgtggtggatttctca
gtcagtgtgtgggacattaacagaccctatgtaccttttgcttccttcgacaaacacact
gatgtagccacaggtattatatggagaaaagatgacccccatgttttgtatagttctagt
cgagattgttacctatatcaacatgtttttaaagacgcaaaaagacctgcagatgagctg
gttcctgcaggcttagacatgagtatccatggagatatatcatatgctactctagataaa
cctgatttaactgttaaaacagggcgattcttcaccacaccaaagaaggatgtgtctaaa
actgacgagtttcttacctacaaaaacagcttaatgtttgtgatatctaatactaataag
tgtttatcaatggactattttgtggactgtgccaggaactatcagctcagtggggcacca
ttacaggagatgtgtgaacataatgcagagcttgcggagagatataacaatgatcaggtt
gctcaaagttggaggattttaaaagtgatgttcacatcatcagagccaacacagagagtt
ttaaatgcaacaagaaaagaaacccaacaagaaatattatcagaagctgccactcccaca
aaccagattggtaatggtgatgcagataattcatccaacaccgactcagaggaagaggaa
gttgtgaacaaggaagatttgacaaacattgcccgaggtcagattccggaggaatggggg
atactgtttgctgatggggaccaagacattccgtacaacaacattgatgggctgcaggaa
ttttccctgcagccagaagcattccagcccaggcatgaaattaaagaccttggcacccca
ttagattccatacagaatggccacgactcgccgacgattagtgctaatgagagcgagaac
aacctcctcagttttccgacctacagtaatggtaaagaggaggatgaggttttgggactt
ttccgaaacaccgtggaactcccagaattcaccttcccccactttgtgtccaagatgttg
taccactatgcagagcagggagatgtacagacagcagtgtgcattctgagtgtactcgga
ccaaaacacagacctcagatagaacctgaagtgcaggaaaactggtttttatcttactta
gatctgctggccagatttcagttatggacaacatccaataagattataaaactttgccat
cttccattggtcagttccctgaaccaacaatctacacgcatccatgtgaactgtcatcgc
tgtaacaggcctctacaaagggtggggtggttgtgtgatcgctgtaaacgagtcatcaac
aactgctctgtatgtcatttacctgtgaaaggattgttcatctggtgtcaaggttgttcc
catggcggtcaccttggacacatcaaggagtggtttggtgaaaataaacagtgtcctaca
ggctgcggtcatctatgcgagttcacgtga
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integrated database retrieval system