Magallana angulata (Portugese oyster): 128181071
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Entry
128181071 CDS
T09348
Name
(RefSeq) aprataxin-like
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128181071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128181071
Enzymes [BR:
canu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
128181071
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
128181071
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
128181071
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128181071
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
128181071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2_4
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
128181071
NCBI-ProteinID:
XP_052705282
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All DBs
Position
4:2928490..2934605
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AA seq
240 aa
AA seq
DB search
MKSTQRILSANPGKNPLMRSIGFGFTVALSVSYLKYSQVMASKRKSEGKSEDDKVSAKKP
APFWKTGLLSAMHDPDLQVYKDDKVIIIKDKYPKAKFHFLVMPKDNIPNLKSLKKENIEL
LKHMHEKGKETAEKSDPDLQFRLGYHAVPSMSHLHLHVISQDFDSPCLKNKKHWNSFTTE
YFVDSEDIIKELEKNSKVIKDVSHSQELLKKNLRCHVCRKEMTTMPALKTHIKQHSYKKS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgacacagcgcatcttgtcggccaatccgggaaagaatccgttgatgcggtct
attggttttggatttactgtagcgctgtcggtttcctacctgaaatattcacaagttatg
gcatcgaagagaaagtcagagggaaagtctgaggatgacaaagtgtcagctaagaaacca
gcaccattctggaagaccggtcttttatctgcaatgcacgaccccgatttacaagtttac
aaagatgacaaagtcatcatcataaaagacaaatacccaaaggcaaaatttcattttctg
gtgatgcccaaagacaacattcctaatttgaaaagtttgaaaaaagagaacattgaactt
ttgaagcatatgcacgaaaaagggaaagaaacagcagaaaagtctgatccagatttacag
tttcggctgggttaccacgctgtgccaagcatgagccatctacacttacatgtgatcagt
caggatttcgatagtccatgtctgaagaataagaaacactggaactcattcactacagag
tactttgtggactcggaggatattatcaaagagcttgagaaaaatagtaaagtcatcaaa
gatgtatctcattcacaggaactgctaaagaaaaatctgaggtgtcatgtgtgtagaaaa
gaaatgacaactatgccagccttaaaaacacatatcaaacaacacagctacaagaaaagt
tga
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