Magallana angulata (Portugese oyster): 128181105
Help
Entry
128181105 CDS
T09348
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03410
Base excision repair
canu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128181105
03450 Non-homologous end-joining
128181105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128181105
Enzymes [BR:
canu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128181105
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128181105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128181105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
BRCT_2
Motif
Other DBs
NCBI-GeneID:
128181105
NCBI-ProteinID:
XP_052705335
LinkDB
All DBs
Position
4:12859466..12903056
Genome browser
AA seq
547 aa
AA seq
DB search
MAKKSRKLPQTFSDVIDKSQKFFTNVNIFILNAGIEKARYDIFRRQTERFGGTLVSGIED
LGADDAGSGYVVVDDKMEADRMCRLLKIDHPPPYVKTVKSSWLSACIKQKQLVDIVAYEL
DVSGLSRKRKHENKSDTESEDGKVSEEKKEVKPATMWHSYKKPKTQEIEGEDPDSDYAPS
DGEGPDEVQGPSVSATSSTSPEKLIAKGQWVCTQSSKMMSENLNEHITCKLEEMVKKYKS
TSDQWRAFGYQKAIQVLRKHPTQISSWEEARALPGVGTRLADKIWEIAESGELRKLNEFN
ADEDIKVIELFTNVWGAGAHTARQWFQQGFRTLDDLHTKAKLTHQQKIGLKHYEDILDRM
PRTEAAAIEQVVREAAEFLAPGVIAQCCGSYRRGKPTCGDVDVLVTHPDGKSHKGLFSKL
LAKLKENGFLTDDLVTAEDNGNQKKYLGVCRLPGENQKHRRIDIIVVPYDEYACALVYFT
GSAHLNRSLRLLAKKSGMSLSEHSLNTGVIRKGNEKVFEGTPLPTPTEESVFRHLGVPYR
PPEERDH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaatcgcgaaaactacctcaaactttcagcgacgtgattgataagtcgcag
aagttctttacaaatgttaacatatttattttaaatgctggaatcgaaaaagctcgctat
gatatatttcggagacagacggagagatttggtggcacactcgtgtctgggatagaagat
ttaggggcagatgatgcaggatcgggctatgttgtcgtcgatgacaaaatggaagcagac
agaatgtgtaggcttctgaaaatagatcaccctcctccatatgtgaagactgtaaaatca
tcttggttaagcgcgtgcataaaacaaaagcaactggtagacattgtcgcctatgaatta
gatgtatctgggttaagtcgaaagagaaaacatgaaaataaaagtgatacagagagtgaa
gatggtaaagtttcagaggaaaagaaggaagttaagccggccacaatgtggcatagttac
aagaaacccaagacccaagaaattgagggagaggatccagacagtgattacgcccccagt
gatggggagggaccagatgaagtacagggacctagcgtcagcgctacatcatcaacatca
ccagagaagttaattgctaaaggacaatgggtatgcacccagtcttcaaaaatgatgtca
gaaaacctgaatgagcacatcacctgcaaacttgaggaaatggtgaaaaaatacaagtct
acaagtgatcaatggagagcctttggatatcagaaagcaatccaggtgctccgaaaacac
cctacacagatatcttcatgggaggaggcccgggcattgccaggagtcgggaccagactg
gcggacaagatatgggaaattgcagaaagtggagagcttcggaaactcaacgaatttaat
gcggacgaagatatcaaggtgattgagttgttcaccaacgtatggggagctggggcccat
accgccaggcagtggtttcagcagggattcagaacactagatgaccttcatacaaaagcc
aagctaacacatcagcaaaagattgggttgaagcattatgaggacattttggatcggatg
ccgagaacggaggcggccgccatagaacaagtggtgagagaagctgcggagttcctagcc
cccggtgtcattgcccagtgctgtgggtcttaccgccggggtaagccaacctgtggggat
gtggatgttctggtgacccaccctgatggcaaatctcacaaagggctcttctctaaactc
cttgccaaactgaaagaaaatggttttctgacggacgacctagtaacagcagaggacaac
ggaaatcagaagaaatatttgggagtctgtagacttccgggagagaaccaaaagcatcgc
agaattgatatcattgtggtgccatatgacgagtacgcatgcgcgttggtttactttacc
ggatcagcccatctaaaccgatctttgaggttattggccaagaagtcagggatgtccctg
tcagagcactcactaaataccggggtgatcagaaagggaaacgagaaagtctttgaggga
acccccctacccacccccacagaagaatcggttttcagacatctgggggtaccctaccgt
ccaccagaggagagggatcactga
DBGET
integrated database retrieval system