Magallana angulata (Portugese oyster): 128181256
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Entry
128181256 CDS
T09348
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128181256
Transcription factors [BR:
canu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128181256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128181256
NCBI-ProteinID:
XP_052705551
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Position
4:complement(20580119..20582154)
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AA seq
327 aa
AA seq
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MEYQDLPEQDLPKPGQTQLPPSSQGMHVPVNPQHAGMHGSHSHGQPQQHSPNPQTNLNGS
GAGSPNSGASKKDADRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE
AEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKTLMKKDKYALPGMPSGAPLQPGREGQM
YPMGGYMPNGYPMMHDANAYMNQMGLAGQYGYMPSQQMPGNQMTSGSYMNGSSSYTMSMA
GMGPYPSMSPSQMTGGVKREPTPGSGPQGPGRPTNPGDLREMISMYLPTGDGSDPHSAQQ
RLMHQAHYQPPPPSSEGVNNTVPLTHM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaggaccttcccgaacaggacttaccaaagcccggacaaacacagctaccc
ccatcttctcaaggaatgcacgtgccggtcaaccctcagcacgcggggatgcatggctcc
cattctcacggccagccccagcaacactcaccgaatccccaaaccaacctcaatggcagc
ggagcagggtccccgaattctggggccagcaaaaaagacgcagacagagtgaagcgccct
atgaacgccttcatggtgtggtctcgcggccagagacggaaaatggcccaggagaacccg
aaaatgcataattcagagataagtaaaagactcggtgctgagtggaaattattatccgaa
gccgaaaaacggccatttatcgacgaggccaaaagactccgtgccatacacatgaaggaa
catcccgattacaaatacaggccaaggaggaaaacgaaaacactcatgaagaaagataag
tacgccctacccggaatgccatccggagcccctctacagcccgggcgggagggacagatg
taccccatgggaggatacatgcccaacgggtaccctatgatgcacgacgcaaacgcatac
atgaatcaaatgggccttgccggacagtacggctacatgccatcacaacaaatgcccggg
aaccagatgacgtcgggatcctacatgaacggaagctccagctacaccatgtccatggcc
gggatgggcccttacccctcaatgtctccctcgcagatgactggtggcgtcaaacgagag
cccacccccggatccggtccccagggccccgggcgacccaccaaccccggagatttacgt
gaaatgatcagtatgtacctacccacgggcgacggctctgacccccatagtgctcagcag
agactcatgcatcaagctcactaccaaccccctccaccctcctcagaaggggtaaacaat
actgtaccgcttacgcatatgtaa
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