Magallana angulata (Portugese oyster): 128181861
Help
Entry
128181861 CDS
T09348
Name
(RefSeq) transcription factor SOX-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128181861
Transcription factors [BR:
canu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128181861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128181861
NCBI-ProteinID:
XP_052706368
LinkDB
All DBs
Position
4:40699896..40701751
Genome browser
AA seq
265 aa
AA seq
DB search
MSSCDEMSPQDLSSRGDPCDYGDTSKLGGGGGEHVKRPMNAFMVWSRGQRRKMAQDNPKM
HNSEISKRLGAEWKLLSEEDKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSLLKKDKYP
FPMAMPMIPGISPLGGLPPGFGSLVPTSEAMSLNEKMRAFLPPSSSAHSPFSHMDGSGKL
DSGISSGLSAHDRLYSPYLSALNAHSSSAAAALSGMPPAAHSHPGQYLLPYCPPSYMPSQ
NDINRPVAYVFVKPEDHYSRHPAMI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttgtgacgaaatgagcccacaggatttatcttctaggggagacccttgtgat
tatggcgacacctccaaactcggtggcggaggcggcgagcatgtcaaaagacccatgaac
gcttttatggtgtggtcccgaggacaacgaagaaaaatggcccaggacaatccaaaaatg
cacaactcggaaataagtaagaggcttggtgccgagtggaaattgctatcggaagaggac
aagagaccatttattgatgaagcaaagagactccgagcgctacatatgaaggaacatccg
gactacaaataccggcccagaaggaaacctaaatctctgctcaagaaagataagtatcct
ttcccgatggctatgccaatgattcccggtattagcccactgggcggcctgcccccgggc
tttggttctctagtcccgacgtcagaagctatgtcgttaaacgaaaaaatgagagcgttt
ctcccaccatcttcgtctgctcactctccttttagtcacatggacggaagtggtaaattg
gacagtggtatttctagcggtctcagtgcccacgatagactgtactccccctatctatct
gcgttaaacgcccactcctcatcagcagccgctgccttgagcgggatgcccccggcggca
cattcacatccgggacagtacctccttccttattgcccacccagttatatgccctcgcaa
aatgacattaatcgtccagtggcgtatgtatttgtgaaacctgaagaccattatagccgt
catcccgccatgatctga
DBGET
integrated database retrieval system
